mRNA_Ecto-sp13_S_contig7921.19206.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7921.19206.1 vs. uniprot
Match: D7FRS8_ECTSI (ABC transporter domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRS8_ECTSI) HSP 1 Score: 334 bits (856), Expect = 7.630e-115 Identity = 175/201 (87.06%), Postives = 184/201 (91.54%), Query Frame = 1
Query: 1 MSGESQQQLFSVDGSVPEGALCAIIGPTDSGKSALLTLLSGRPCMGRVEGRALFEGRLIQEKQASAGFGRRSIGFVRQGHTGYLAELSVFNNMMFAAMLRTPGSLEDQVTNVETVIEDTALDECRDTRASFISAGEKRRLSLALELLSDRRILLLDGVFSGLDTNACMVLMDVLKRLSRKKARRCRRSNV*EEVVQPPLAP 603
MSGE QQQLFSVDGSVPEGALCAIIGPTDSGKSALL LLSGRPCMGRVEGRALFEGRLI+E+Q + R SIGFVRQGHTGYLAELSVFNNMMFAAMLRTPGSLEDQVT VETVI DTALDECRDTRASF++AGEKRRLSLA+ELLSDRRILLLDGVFSGLDTN MVLM+VLKRLSR K RCRRS++ EEV QPPLAP
Sbjct: 1 MSGEFQQQLFSVDGSVPEGALCAIIGPTDSGKSALLALLSGRPCMGRVEGRALFEGRLIEEQQMPSNTDRHSIGFVRQGHTGYLAELSVFNNMMFAAMLRTPGSLEDQVTKVETVIGDTALDECRDTRASFLAAGEKRRLSLAVELLSDRRILLLDGVFSGLDTNESMVLMEVLKRLSRNKVTRCRRSSMWEEVFQPPLAP 201
BLAST of mRNA_Ecto-sp13_S_contig7921.19206.1 vs. uniprot
Match: A0A3P3YM44_PLABS (ABC transporter domain-containing protein n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YM44_PLABS) HSP 1 Score: 100 bits (248), Expect = 6.210e-21 Identity = 67/183 (36.61%), Postives = 100/183 (54.64%), Query Frame = 1
Query: 10 ESQQQLFSVDGSVPEGALCAIIGPTDSGKSALLTLLSGRPCMGRVEGRALFEGRLIQEKQASAGFGRRSIGFVRQGHTGYLAELSVFNNMMFAAMLRTPGSL--EDQVTNVETVIEDTALDECRDT------RASFISAGEKRRLSLALELLSDRRILLLDGVFSGLDTNACMVLMDVLKRLS 534
E + L V G G LCAI+G + +GK+ LL +L+GR +G + G L G E ++++ FV Q L LSV +M+AAMLR P S+ ED+ VE +IE L +C D+ A IS GE++R+S+ +EL++D +L LD SGLD +MDV+K+++
Sbjct: 108 EERALLKGVSGEAKPGQLCAIMGSSGAGKTTLLNVLAGRIDVGNLSGSILVNGDPRTESTW-----KKTVAFVEQDDL-MLHNLSVRETLMYAAMLRLPSSVSKEDKANRVEKIIEQLGLKKCADSWIGSVDTARGISGGERKRVSIGIELVTDPSLLFLDEPTSGLDAFTACTVMDVVKKVA 284
BLAST of mRNA_Ecto-sp13_S_contig7921.19206.1 vs. uniprot
Match: A0A7R9V328_9CHLO (Hypothetical protein n=2 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9V328_9CHLO) HSP 1 Score: 99.8 bits (247), Expect = 8.890e-21 Identity = 66/180 (36.67%), Postives = 101/180 (56.11%), Query Frame = 1
Query: 16 QQQLFSVDGSVPEGALCAIIGPTDSGKSALLTLLSGRPCMGRVEGRALFEGRLIQEKQASAGFGRRSIGFVRQGHTGYLAELSVFNNMMFAAMLRTPGSL--EDQVTNVETVIEDTALDECRDTRASFI-----SAGEKRRLSLALELLSDRRILLLDGVFSGLDTNACMVLMDVLKRLS 534
+Q LF+V G G L A++GP+ GKS+LL +L GR R G + G+ + + +RSIGFV Q Y L+VF + +AAML+ P ++ ED++ E V+E L CRDT + S GE++R+S+ +ELL++ ++LLD SGLD+ + LM L+ L+
Sbjct: 127 RQVLFNVSGCAEPGELMALMGPSGCGKSSLLQVLGGRTTA-RPRGAIGYNGKKLTKAM------KRSIGFVSQDDILY-GSLTVFETLYYAAMLQLPRTMRTEDKIARAEIVMETLGLSGCRDTIIGDVFMRGVSGGERKRVSIGVELLTNPSVILLDEPTSGLDSTTALKLMHTLRNLA 298
BLAST of mRNA_Ecto-sp13_S_contig7921.19206.1 vs. uniprot
Match: A0A7R9V2E3_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9V2E3_9CHLO) HSP 1 Score: 99.8 bits (247), Expect = 9.050e-21 Identity = 66/180 (36.67%), Postives = 101/180 (56.11%), Query Frame = 1
Query: 16 QQQLFSVDGSVPEGALCAIIGPTDSGKSALLTLLSGRPCMGRVEGRALFEGRLIQEKQASAGFGRRSIGFVRQGHTGYLAELSVFNNMMFAAMLRTPGSL--EDQVTNVETVIEDTALDECRDTRASFI-----SAGEKRRLSLALELLSDRRILLLDGVFSGLDTNACMVLMDVLKRLS 534
+Q LF+V G G L A++GP+ GKS+LL +L GR R G + G+ + + +RSIGFV Q Y L+VF + +AAML+ P ++ ED++ E V+E L CRDT + S GE++R+S+ +ELL++ ++LLD SGLD+ + LM L+ L+
Sbjct: 272 RQVLFNVSGCAEPGELMALMGPSGCGKSSLLQVLGGRTTA-RPRGAIGYNGKKLTKAM------KRSIGFVSQDDILY-GSLTVFETLYYAAMLQLPRTMRTEDKIARAEIVMETLGLSGCRDTIIGDVFMRGVSGGERKRVSIGVELLTNPSVILLDEPTSGLDSTTALKLMHTLRNLA 443
BLAST of mRNA_Ecto-sp13_S_contig7921.19206.1 vs. uniprot
Match: L8HBX9_ACACA (ABC2 type transporter superfamily protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HBX9_ACACA) HSP 1 Score: 99.0 bits (245), Expect = 1.490e-20 Identity = 65/188 (34.57%), Postives = 111/188 (59.04%), Query Frame = 1
Query: 7 GESQQQLFSVDGSVPEGALCAIIGPTDSGKSALLTLLSGRPCMGRVEGRALFEGRLIQEKQASAGFGRRSIGFVRQGHTGYLAELSVFNNMMFAAMLRTPGS--LEDQVTNVETVIEDTALDECRDTRASF-----ISAGEKRRLSLALELLSDRRILLLDGVFSGLDTNACMVLMDVLKRLSRKKAR 549
G +++ L +++G G L AI+GP+ GK+ L LL+GR G VEG+ G+ ++ +R + +V Q T + +LSV +N+ ++A+LR P S L+++ VE VIE+ L +C +T IS G++RR+S+ +EL++D ILLLD SGLD+ + ++++L +L+R + R
Sbjct: 98 GTAKKLLDNLEGFAAAGRLLAIMGPSGCGKTTFLDLLAGRVSSGVVEGQITVNGQPKSKRT------KRLMAYVMQEDT-LIGDLSVRSNLYYSALLRLPRSMPLKEKKKKVEQVIEELGLSDCANTIVGTPLRRGISGGQRRRVSIGMELITDPSILLLDEPTSGLDSKSAASVVEILLKLARDRNR 278
BLAST of mRNA_Ecto-sp13_S_contig7921.19206.1 vs. uniprot
Match: A0A1Y2AYK9_9TREE (p-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Naematelia encephala TaxID=71784 RepID=A0A1Y2AYK9_9TREE) HSP 1 Score: 98.6 bits (244), Expect = 2.380e-20 Identity = 62/177 (35.03%), Postives = 96/177 (54.24%), Query Frame = 1
Query: 25 LFSVDGSVPEGALCAIIGPTDSGKSALLTLLSGRPCMGRVEGRALFEGRLIQEKQASAGFGRRSIGFVRQGHTGYLAELSVFNNMMFAAMLRTPGSL--EDQVTNVETVIEDTALDECRDTRASF-----ISAGEKRRLSLALELLSDRRILLLDGVFSGLDTNACMVLMDVLKRLS 534
L SV P G + AI+GP+ +GKS LL LL+ RP G+L+ Q ++ R ++ FV Q +L L+V + +AA+LR P + ++V ETV+ L +C D IS GEKRRLSLA+++++D +LL+D SGLD + + +M VL+ ++
Sbjct: 741 LDSVSAVFPAGEVSAILGPSGAGKSTLLQLLAHRPITASPLSHFTTSGQLLFANQPASSTSRSNVAFVEQDDDWHLPSLTVRETLRYAAILRLPNKMPRREKVARAETVLRMLGLKDCADLPVGGQLLKGISGGEKRRLSLAVQMINDPAVLLVDEPTSGLDASIALSVMQVLRDIA 917
BLAST of mRNA_Ecto-sp13_S_contig7921.19206.1 vs. uniprot
Match: UPI001F5E7752 (ABC transporter G family member 22 isoform X1 n=2 Tax=Hydra vulgaris TaxID=6087 RepID=UPI001F5E7752) HSP 1 Score: 98.2 bits (243), Expect = 2.810e-20 Identity = 63/191 (32.98%), Postives = 112/191 (58.64%), Query Frame = 1
Query: 1 MSGESQQQLFSVDGSVPEGALCAIIGPTDSGKSALLTLLSGRPCMGRVEGRALFEGRLIQEKQASAGFGRRSIGFVRQGHTGYLAELSVFNNMMFAAMLRTPGSL--EDQVTNVETVIEDTALDECRDT------RASFISAGEKRRLSLALELLSDRRILLLDGVFSGLDTNACMVLMDVLKRLSRKKAR 549
+S +S++ L +V G + G +CAI+GP+ +GKS+LL +L+GR R +G L G + + + F RR IG+V Q + + L++ ++ F +R P S+ ++++T V+ VI+D L +C +T S GE++R S+A+EL+++ ++LD +GLD++ LM+ LK L+ K+ R
Sbjct: 19 VSVDSKEILKNVCGEINPGEVCAIMGPSGAGKSSLLNILAGR----RTKGVVLNNGSITINGENYSKFHRRKIGYVTQEDI-FFSNLTIRQSLEFVGKIRLPDSMKWDEKLTIVDKVIDDLGLRKCENTVLGGDFYTKGCSGGERKRCSIAVELITNPACIILDEPTTGLDSSTAFNLMNTLKNLAEKEKR 204
BLAST of mRNA_Ecto-sp13_S_contig7921.19206.1 vs. uniprot
Match: A0A388LTX5_CHABU (ABC transporter domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LTX5_CHABU) HSP 1 Score: 98.2 bits (243), Expect = 3.220e-20 Identity = 69/180 (38.33%), Postives = 103/180 (57.22%), Query Frame = 1
Query: 19 QQLFSVDGSVPEGALCAIIGPTDSGKSALLTLLSGRPCMGRVEGRALFEGRLIQEKQASAGFGRRSIGFVRQGHTGYLAELSVFNNMMFAAMLRTPG--SLEDQVTNVETVIEDTALDECRDT-----RASFISAGEKRRLSLALELLSDRRILLLDGVFSGLDTNACMVLMDVLKRLSR 537
Q L V G G L AI+GP+ SGKS LL LL GR G VEG + G + +++A + + F++Q G L +L+V ++ ++AMLR P SL ++ VE +IE+ L C DT +S G+KRRLS+A ELL+ ++LLD SGLD+ + + ++ +L RL+R
Sbjct: 623 QILHDVSGWATAGQLTAIMGPSGSGKSTLLELLIGRRSSGVVEGSLMISGYPLSQRRAWL---KANTTFLQQEDVG-LPQLTVRQSLTYSAMLRLPRKMSLAAKLIRVEQIIEEVGLGSCADTIFGGPNLPGLSGGQKRRLSIATELLTLPSVILLDEPTSGLDSASALDIIRLLSRLAR 798
BLAST of mRNA_Ecto-sp13_S_contig7921.19206.1 vs. uniprot
Match: A0A8B7E386_HYDVU (ABC transporter G family member 22-like n=1 Tax=Hydra vulgaris TaxID=6087 RepID=A0A8B7E386_HYDVU) HSP 1 Score: 97.1 bits (240), Expect = 4.420e-20 Identity = 63/191 (32.98%), Postives = 112/191 (58.64%), Query Frame = 1
Query: 1 MSGESQQQLFSVDGSVPEGALCAIIGPTDSGKSALLTLLSGRPCMGRVEGRALFEGRLIQEKQASAGFGRRSIGFVRQGHTGYLAELSVFNNMMFAAMLRTPGSL--EDQVTNVETVIEDTALDECRDT------RASFISAGEKRRLSLALELLSDRRILLLDGVFSGLDTNACMVLMDVLKRLSRKKAR 549
+S +S++ L +V G + G +CAI+GP+ +GKS+LL +L+GR +G V L G + + + F RR IG+V Q + + L++ ++ F +R P S+ ++++T V+ VI+D L +C +T S GE++R S+A+EL+++ ++LD +GLD++ LM+ LK L+ K+ R
Sbjct: 19 VSVDSKEILKNVCGEINPGEVCAIMGPSGAGKSSLLNILAGRRTIGVV----LNNGSITINGENYSKFHRRKIGYVTQEDI-FFSNLTIRQSLEFVGKIRLPDSMKWDEKLTIVDKVIDDLGLRKCENTVLGGDFYTKGCSGGERKRCSIAVELITNPACIILDEPTTGLDSSTAFNLMNTLKNLAEKEKR 204
BLAST of mRNA_Ecto-sp13_S_contig7921.19206.1 vs. uniprot
Match: A0A197JCM6_9FUNG (Uncharacterized protein n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197JCM6_9FUNG) HSP 1 Score: 97.4 bits (241), Expect = 5.760e-20 Identity = 66/180 (36.67%), Postives = 104/180 (57.78%), Query Frame = 1
Query: 25 LFSVDGSVPEGALCAIIGPTDSGKSALLTLLSGRPCMGRVEGRALFEGRLIQEKQASAGFGRRSIGFVRQGHTGYLAELSVFNNMMFAAMLRTPGSLEDQVTN--VETVIEDTALDECRDTR-----ASFISAGEKRRLSLALELLSDRRILLLDGVFSGLDTNACMVLMDVLKRLSRKK 543
L + GS P G + A++GP+ +GKS L+ +L+G+ G+V G L G+ + E + RR++GFV Q T A +V+ ++F+AMLR P ++ + V VIE L C+D + A IS GEKRR+S+ALEL++ IL+LD SGLD+ + +++ L +L+ K
Sbjct: 376 LKGISGSAPAGVVLAVMGPSGAGKSTLVDILAGKRKDGKVSGHILLNGKQVHESEI-----RRAVGFVDQEDT-LPATQTVWEAVLFSAMLRLPEAMPIHRVHERVAEVIEMLGLTHCKDRQIGNVTARGISGGEKRRVSIALELITRPPILILDEPTSGLDSYSAHMVVQQLCKLAASK 549 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7921.19206.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7921.19206.1 >prot_Ecto-sp13_S_contig7921.19206.1 ID=prot_Ecto-sp13_S_contig7921.19206.1|Name=mRNA_Ecto-sp13_S_contig7921.19206.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=191bp MSGESQQQLFSVDGSVPEGALCAIIGPTDSGKSALLTLLSGRPCMGRVEGback to top mRNA from alignment at Ecto-sp13_S_contig7921:1268..3378- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7921.19206.1 ID=mRNA_Ecto-sp13_S_contig7921.19206.1|Name=mRNA_Ecto-sp13_S_contig7921.19206.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2111bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7921:1268..3378- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7921:1268..3378- >mRNA_Ecto-sp13_S_contig7921.19206.1 ID=mRNA_Ecto-sp13_S_contig7921.19206.1|Name=mRNA_Ecto-sp13_S_contig7921.19206.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=573bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7921:1268..3378- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |