prot_Ecto-sp13_S_contig7818.19071.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7818.19071.1
Unique Nameprot_Ecto-sp13_S_contig7818.19071.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length135
Homology
BLAST of mRNA_Ecto-sp13_S_contig7818.19071.1 vs. uniprot
Match: D7FVJ9_ECTSI (Similar to chemokine (C-C motif) receptor 6a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVJ9_ECTSI)

HSP 1 Score: 223 bits (567), Expect = 6.070e-72
Identity = 116/134 (86.57%), Postives = 124/134 (92.54%), Query Frame = 0
Query:    1 MLINELVRDYLSYNGYGNALGVFMAESGQPIERSLDRGFVRDELGLSERRDSTDRGGARPLPLLYGITHALKRRRNDASIDNRGYAEFEEXXXXXXXXXHPDVGGSNSIDWADPAPVLFTKHNGSSGGDGGGIS 134
            +LINELVRDYLSYNGY NALGVFMAESGQPIERSLDRGF+RDELGLSER DS DRGGARPLPLLYGITHALKRRR +AS++N  YAE E XXXXXXXXXHPDVGG N+IDWADPAPVLFTKHNGS+GG GGGI+
Sbjct:   71 LLINELVRDYLSYNGYANALGVFMAESGQPIERSLDRGFIRDELGLSERLDSIDRGGARPLPLLYGITHALKRRRKEASVNNGDYAECEXXXXXXXXXXHPDVGGRNNIDWADPAPVLFTKHNGSTGGGGGGIA 204          
BLAST of mRNA_Ecto-sp13_S_contig7818.19071.1 vs. uniprot
Match: A0A6H5KW76_9PHAE (LisH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW76_9PHAE)

HSP 1 Score: 214 bits (546), Expect = 1.050e-68
Identity = 116/135 (85.93%), Postives = 121/135 (89.63%), Query Frame = 0
Query:    1 MLINELVRDYLSYNGYGNALGVFMAESGQPIERSLDRGFVRDELGLSERRDSTDRGGARPLPLLYGITHALKRRRNDASIDNRGYAEFEEXXXXXXXXX-----HPDVGGSNSIDWADPAPVLFTKHNGSSGGDG 130
            +LINELVRDYLSYNGY NALGVFMAESGQPIERSLDRGF+RDELGLSERRDSTD G ARPLPLLYGITHALKRRR +AS +N GYAE EEXXXXXXXXX     HPDVGGSNSI+WADPAPVLFTKH GSSGG G
Sbjct:   71 LLINELVRDYLSYNGYSNALGVFMAESGQPIERSLDRGFIRDELGLSERRDSTDHGSARPLPLLYGITHALKRRRKEASGNNGGYAECEEXXXXXXXXXEGCGGHPDVGGSNSIEWADPAPVLFTKHKGSSGGSG 205          
BLAST of mRNA_Ecto-sp13_S_contig7818.19071.1 vs. uniprot
Match: A0A835YQT6_9STRA (LisH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQT6_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 1.650e-20
Identity = 43/78 (55.13%), Postives = 58/78 (74.36%), Query Frame = 0
Query:    1 MLINELVRDYLSYNGYGNALGVFMAESGQPIERSLDRGFVRDELGLSERRDSTDRGGARPLPLLYGITHALKRRRNDA 78
            ++INEL+RDY  YNGY +AL VF++ES QP + SL RGF+RDELG+SE  DS  +   + LPLLYGI H L++ + D+
Sbjct:   75 LIINELIRDYFEYNGYSHALSVFLSESCQPDDASLSRGFIRDELGVSEELDSARQ---KQLPLLYGILHMLQKWKRDS 149          
BLAST of mRNA_Ecto-sp13_S_contig7818.19071.1 vs. uniprot
Match: A0A024GKL4_9STRA (LisH domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GKL4_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 2.170e-14
Identity = 38/92 (41.30%), Postives = 54/92 (58.70%), Query Frame = 0
Query:    1 MLINELVRDYLSYNGYGNALGVFMAESGQPIERSLDRGFVRDELGLSERRDSTDRGGARPLPLLYGITHALKRRRN--------DASIDNRG 84
            +++NEL+R+YL YNGY +AL VF+ ESGQP E++  R F+  ELG+ E    T       +PLLY I   L++RR         D  +D +G
Sbjct:   55 LILNELIREYLEYNGYRHALSVFLPESGQPTEKAFPRSFLSSELGVREDARFTQ------IPLLYNILFILQQRRENNAKGAQEDRELDTQG 140          
BLAST of mRNA_Ecto-sp13_S_contig7818.19071.1 vs. uniprot
Match: A0A2P4XXC4_9STRA (LisH domain-containing protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XXC4_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 2.510e-14
Identity = 35/80 (43.75%), Postives = 53/80 (66.25%), Query Frame = 0
Query:    1 MLINELVRDYLSYNGYGNALGVFMAESGQPIERSLDRGFVRDELGLSERRDSTDRGGARPLPLLYGITHALKRRRNDASI 80
            ++INEL+R+YL YNGY +AL VF+ ESGQP+E+  DR F+  EL ++E    T       +PLLY I  +L++ R+  ++
Sbjct:   46 LIINELIREYLEYNGYRHALSVFLPESGQPVEKPFDRQFLSSELNVTEDPRFTH------VPLLYSIVASLQQNRSTTNL 119          
BLAST of mRNA_Ecto-sp13_S_contig7818.19071.1 vs. uniprot
Match: F0WR59_9STRA (PREDICTED: similar to predicted protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WR59_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 5.800e-14
Identity = 34/75 (45.33%), Postives = 49/75 (65.33%), Query Frame = 0
Query:    1 MLINELVRDYLSYNGYGNALGVFMAESGQPIERSLDRGFVRDELGLSERRDSTDRGGARPLPLLYGITHALKRRR 75
            +++NEL+R+YL YNGY +AL VF+ ESGQP+E+   R F+  ELG+ +    T       +PLLY I   L++RR
Sbjct:   56 LILNELIREYLEYNGYRHALSVFLPESGQPLEKPFPRSFISSELGVRDDAQFTQ------VPLLYNILLILQQRR 124          
BLAST of mRNA_Ecto-sp13_S_contig7818.19071.1 vs. uniprot
Match: A0A1V9YC06_9STRA (LisH domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YC06_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 4.960e-13
Identity = 38/84 (45.24%), Postives = 50/84 (59.52%), Query Frame = 0
Query:    1 MLINELVRDYLSYNGYGNALGVFMAESGQPIERSLDRGFVRDELGLSERRDSTDRGGARPLPLLYGITHALKRRRNDASIDNRG 84
            ++INEL+R+YL YNGY + L VF+ ESGQP ER   R F+  EL ++E            +PLLYGI  AL+    DA   N+G
Sbjct:   53 LIINELIREYLEYNGYRHTLSVFLPESGQPQERPFQRRFLAHELNITEDPRYNQ------VPLLYGIVTALQ----DAKASNQG 126          
BLAST of mRNA_Ecto-sp13_S_contig7818.19071.1 vs. uniprot
Match: A0A067BXU9_SAPPC (LisH domain-containing protein n=2 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BXU9_SAPPC)

HSP 1 Score: 70.9 bits (172), Expect = 5.210e-13
Identity = 36/83 (43.37%), Postives = 49/83 (59.04%), Query Frame = 0
Query:    1 MLINELVRDYLSYNGYGNALGVFMAESGQPIERSLDRGFVRDELGLSERRDSTDRGGARPLPLLYGITHALKRRRNDASIDNR 83
            ++INEL+R+YL YNGY + L VF+ ESGQP+ER   R F+  EL ++E            +PL+YGI  AL+  R  A    R
Sbjct:   53 LIINELIREYLEYNGYRHTLSVFLPESGQPLERPFQRRFLAHELHIAEDPRYNQ------IPLVYGIVAALQDARTTAESPPR 129          
BLAST of mRNA_Ecto-sp13_S_contig7818.19071.1 vs. uniprot
Match: A0A7S1Q0J4_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1Q0J4_ALECA)

HSP 1 Score: 70.9 bits (172), Expect = 8.500e-13
Identity = 41/86 (47.67%), Postives = 53/86 (61.63%), Query Frame = 0
Query:    1 MLINELVRDYLSYNGYGNALGVFMAESGQPIERSLDRGFVRDELGLSERRDSTDRGGARPLPLLYGITHALKRRRNDASIDNRGYA 86
            ++INEL+R+YL YNGY +AL V + ESG P ER  DR F+  EL + E   S      R LPL+YG+   L R R+DA +D  G A
Sbjct:   73 VVINELIREYLEYNGYLHALSVLLPESGHPQERQFDRQFLAAELQVQEDERS------RSLPLIYGLVRGL-RPRSDA-LDPAGSA 150          
BLAST of mRNA_Ecto-sp13_S_contig7818.19071.1 vs. uniprot
Match: T0R2U2_SAPDV (LisH domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0R2U2_SAPDV)

HSP 1 Score: 71.2 bits (173), Expect = 1.060e-12
Identity = 37/86 (43.02%), Postives = 50/86 (58.14%), Query Frame = 0
Query:    1 MLINELVRDYLSYNGYGNALGVFMAESGQPIERSLDRGFVRDELGLSERRDSTDRGGARPLPLLYGITHALKRRRNDASIDNRGYA 86
            ++INEL+R+YL YNGY + L VF+ ESGQP+ER   R F+  EL ++E            +PL+YGI  AL+  R  A    R  A
Sbjct:   53 LIINELIREYLEYNGYRHTLSVFLPESGQPLERPFQRRFLAHELHIAEDPRYNQ------IPLVYGIVAALQDARTTAESPPRADA 132          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7818.19071.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVJ9_ECTSI6.070e-7286.57Similar to chemokine (C-C motif) receptor 6a n=1 T... [more]
A0A6H5KW76_9PHAE1.050e-6885.93LisH domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A835YQT6_9STRA1.650e-2055.13LisH domain-containing protein n=1 Tax=Tribonema m... [more]
A0A024GKL4_9STRA2.170e-1441.30LisH domain-containing protein n=1 Tax=Albugo cand... [more]
A0A2P4XXC4_9STRA2.510e-1443.75LisH domain-containing protein n=1 Tax=Phytophthor... [more]
F0WR59_9STRA5.800e-1445.33PREDICTED: similar to predicted protein putative n... [more]
A0A1V9YC06_9STRA4.960e-1345.24LisH domain-containing protein n=1 Tax=Achlya hypo... [more]
A0A067BXU9_SAPPC5.210e-1343.37LisH domain-containing protein n=2 Tax=Saprolegnia... [more]
A0A7S1Q0J4_ALECA8.500e-1347.67Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
T0R2U2_SAPDV1.060e-1243.02LisH domain-containing protein n=1 Tax=Saprolegnia... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7818contigEcto-sp13_S_contig7818:4050..5223 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7818.19071.1mRNA_Ecto-sp13_S_contig7818.19071.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7818 3551..6056 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7818.19071.1 ID=prot_Ecto-sp13_S_contig7818.19071.1|Name=mRNA_Ecto-sp13_S_contig7818.19071.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=135bp
MLINELVRDYLSYNGYGNALGVFMAESGQPIERSLDRGFVRDELGLSERR
DSTDRGGARPLPLLYGITHALKRRRNDASIDNRGYAEFEEEEEEEGGGGH
PDVGGSNSIDWADPAPVLFTKHNGSSGGDGGGIS*
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