mRNA_Ecto-sp13_S_contig7818.19071.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7818.19071.1 vs. uniprot
Match: D7FVJ9_ECTSI (Similar to chemokine (C-C motif) receptor 6a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVJ9_ECTSI) HSP 1 Score: 342 bits (877), Expect = 2.600e-115 Identity = 177/197 (89.85%), Postives = 186/197 (94.42%), Query Frame = 1
Query: 1 QRSQGEPLEGGDGTIDDLKQALVENLEHRGVLGKLRAKVRAEVFHTLEGPQEGVLPTPLSNENMLINELVRDYLSYNGYGNALGVFMAESGQPIERSLDRGFVRDELGLSERRDSTDRGGARPLPLLYGITHALKRRRNDASIDNRGYAEFEEXXXXXXXXXHPDVGGSNSIDWADPAPVLFTKHNGSSGGDGGGIS 591
QRSQGEPLEGGDGTIDDLKQALVENLEHRGVLGKLRAKVRAEVFHTLEGPQE VLPTPLSN+N+LINELVRDYLSYNGY NALGVFMAESGQPIERSLDRGF+RDELGLSER DS DRGGARPLPLLYGITHALKRRR +AS++N YAE E XXXXXXXXXHPDVGG N+IDWADPAPVLFTKHNGS+GG GGGI+
Sbjct: 8 QRSQGEPLEGGDGTIDDLKQALVENLEHRGVLGKLRAKVRAEVFHTLEGPQERVLPTPLSNDNLLINELVRDYLSYNGYANALGVFMAESGQPIERSLDRGFIRDELGLSERLDSIDRGGARPLPLLYGITHALKRRRKEASVNNGDYAECEXXXXXXXXXXHPDVGGRNNIDWADPAPVLFTKHNGSTGGGGGGIA 204
BLAST of mRNA_Ecto-sp13_S_contig7818.19071.1 vs. uniprot
Match: A0A6H5KW76_9PHAE (LisH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW76_9PHAE) HSP 1 Score: 337 bits (864), Expect = 2.720e-113 Identity = 179/198 (90.40%), Postives = 184/198 (92.93%), Query Frame = 1
Query: 1 QRSQGEPLEGGDGTIDDLKQALVENLEHRGVLGKLRAKVRAEVFHTLEGPQEGVLPTPLSNENMLINELVRDYLSYNGYGNALGVFMAESGQPIERSLDRGFVRDELGLSERRDSTDRGGARPLPLLYGITHALKRRRNDASIDNRGYAEFEEXXXXXXXXX-----HPDVGGSNSIDWADPAPVLFTKHNGSSGGDG 579
QRSQGEPLEGGDGTIDDLKQALVENLEHRGVLGKLRAKVRAEVFHTLEGPQEGVLPTPLSNEN+LINELVRDYLSYNGY NALGVFMAESGQPIERSLDRGF+RDELGLSERRDSTD G ARPLPLLYGITHALKRRR +AS +N GYAE EEXXXXXXXXX HPDVGGSNSI+WADPAPVLFTKH GSSGG G
Sbjct: 8 QRSQGEPLEGGDGTIDDLKQALVENLEHRGVLGKLRAKVRAEVFHTLEGPQEGVLPTPLSNENLLINELVRDYLSYNGYSNALGVFMAESGQPIERSLDRGFIRDELGLSERRDSTDHGSARPLPLLYGITHALKRRRKEASGNNGGYAECEEXXXXXXXXXEGCGGHPDVGGSNSIEWADPAPVLFTKHKGSSGGSG 205
BLAST of mRNA_Ecto-sp13_S_contig7818.19071.1 vs. uniprot
Match: A0A835YQT6_9STRA (LisH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQT6_9STRA) HSP 1 Score: 147 bits (371), Expect = 4.500e-39 Identity = 77/135 (57.04%), Postives = 97/135 (71.85%), Query Frame = 1
Query: 25 EGGDGTIDDLKQALVENLEHRGVLGKLRAKVRAEVFHTLEGPQEGVLPT--PLSNENMLINELVRDYLSYNGYGNALGVFMAESGQPIERSLDRGFVRDELGLSERRDSTDRGGARPLPLLYGITHALKRRRNDA 423
EG GT+DDLK ALV+ LE G LGKLRA+VRAEVF +LE + T PLSN N++INEL+RDY YNGY +AL VF++ES QP + SL RGF+RDELG+SE DS + + LPLLYGI H L++ + D+
Sbjct: 18 EGAAGTLDDLKDALVDALESSGALGKLRARVRAEVFKSLEPEELATRETAPPLSNANLIINELIRDYFEYNGYSHALSVFLSESCQPDDASLSRGFIRDELGVSEELDSARQ---KQLPLLYGILHMLQKWKRDS 149
BLAST of mRNA_Ecto-sp13_S_contig7818.19071.1 vs. uniprot
Match: A0A7S1Q0J4_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1Q0J4_ALECA) HSP 1 Score: 119 bits (299), Expect = 4.130e-29 Identity = 70/137 (51.09%), Postives = 90/137 (65.69%), Query Frame = 1
Query: 40 TIDDLKQALVENLEHRGVLGKLRAKVRAEVFHTLEGPQEGVLPTP-LSNENMLINELVRDYLSYNGYGNALGVFMAESGQPIERSLDRGFVRDELGLSERRDSTDRGGARPLPLLYGITHALKRRRNDASIDNRGYA 447
T+D+LKQALVE L+ RGVLG+++AKVRAE+F L+ Q P P L EN++INEL+R+YL YNGY +AL V + ESG P ER DR F+ EL + E S R LPL+YG+ L R R+DA +D G A
Sbjct: 25 TLDELKQALVETLDQRGVLGQVKAKVRAEIFAALDDEQA---PRPELPRENVVINELIREYLEYNGYLHALSVLLPESGHPQERQFDRQFLAAELQVQEDERS------RSLPLIYGLVRGL-RPRSDA-LDPAGSA 150
BLAST of mRNA_Ecto-sp13_S_contig7818.19071.1 vs. uniprot
Match: I7MCW0_TETTS (Fop amine-terminal dimerization domain protein n=1 Tax=Tetrahymena thermophila (strain SB210) TaxID=312017 RepID=I7MCW0_TETTS) HSP 1 Score: 117 bits (293), Expect = 4.580e-28 Identity = 55/123 (44.72%), Postives = 85/123 (69.11%), Query Frame = 1
Query: 40 TIDDLKQALVENLEHRGVLGKLRAKVRAEVFHTLEGPQEGVLPTPLSNENMLINELVRDYLSYNGYGNALGVFMAESGQPIERSLDRGFVRDELGLSERRDSTDRGGARPLPLLYGITHALKR 408
++++LK L E LE +GVL K+RAK+RAE+F+TL +G P+S+ENM+INEL+R+Y+ +N Y +AL VF+ E+GQP + DR F+ +L + E +++ D LPLLYGI + +K+
Sbjct: 3 SVNELKDVLKETLEEKGVLTKIRAKIRAEIFNTLN--DQGTEKAPVSSENMIINELIREYMEFNNYNHALSVFIPETGQPQQPPFDRNFIAKKLKIIEDKNTRD------LPLLYGIVYGVKK 117
BLAST of mRNA_Ecto-sp13_S_contig7818.19071.1 vs. uniprot
Match: A0A0P1AKI7_PLAHL (Lish domain-containing protein fopnl n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AKI7_PLAHL) HSP 1 Score: 117 bits (293), Expect = 6.540e-28 Identity = 61/141 (43.26%), Postives = 89/141 (63.12%), Query Frame = 1
Query: 25 EGGDGTIDDLKQALVENLEHRGVLGKLRAKVRAEVFHTLEGPQEGVLPTP-LSNENMLINELVRDYLSYNGYGNALGVFMAESGQPIERSLDRGFVRDELGLSERRDSTDRGGARPLPLLYGITHALKRRRNDASIDNRGY 444
+GG T+ DLK+ L + L RG L +++A++RAE+F L+ LP P LSNEN++INEL+R+Y YN Y +AL VF+ ESGQP E+ DR F+ EL +++ T +PLLY I +L++ RN A++ R Y
Sbjct: 3 DGGQATLSDLKEVLKDTLAARGSLDQIKARIRAEIFAALDDQN---LPKPKLSNENLIINELIREYFEYNNYRHALSVFLPESGQPAEKPFDRHFLSSELNITDDPRFTR------VPLLYSIVASLQQNRNQANLRERDY 134
BLAST of mRNA_Ecto-sp13_S_contig7818.19071.1 vs. uniprot
Match: A0A024GKL4_9STRA (LisH domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GKL4_9STRA) HSP 1 Score: 115 bits (289), Expect = 8.630e-28 Identity = 61/143 (42.66%), Postives = 89/143 (62.24%), Query Frame = 1
Query: 40 TIDDLKQALVENLEHRGVLGKLRAKVRAEVFHTLEGPQEGVLPTP-LSNENMLINELVRDYLSYNGYGNALGVFMAESGQPIERSLDRGFVRDELGLSERRDSTDRGGARPLPLLYGITHALKRRRN--------DASIDNRG 441
++ +LK+ L E LE RG LG+++A++RAE+F L+ +P P LSNEN+++NEL+R+YL YNGY +AL VF+ ESGQP E++ R F+ ELG+ E T +PLLY I L++RR D +D +G
Sbjct: 7 SLSELKEVLKETLETRGCLGQIKARIRAEIFSALDDQS---IPKPELSNENLILNELIREYLEYNGYRHALSVFLPESGQPTEKAFPRSFLSSELGVREDARFTQ------IPLLYNILFILQQRRENNAKGAQEDRELDTQG 140
BLAST of mRNA_Ecto-sp13_S_contig7818.19071.1 vs. uniprot
Match: A0A329SX33_9STRA (LisH domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SX33_9STRA) HSP 1 Score: 117 bits (292), Expect = 9.390e-28 Identity = 70/192 (36.46%), Postives = 104/192 (54.17%), Query Frame = 1
Query: 25 EGGDGTIDDLKQALVENLEHRGVLGKLRAKVRAEVFHTLEGPQEGVLPTP-LSNENMLINELVRDYLSYNGYGNALGVFMAESGQPIERSLDRGFVRDELGLSERRDSTDRGGARPLPLLYGITHALKRRRNDASIDNRGYA--------------EFEEXXXXXXXXXHPDVGGSNSIDWA-DPAPVLFTK 552
+GG T+ DLK+ L + L RG L +++A++RAE+F L+ +P P LSNEN++INEL+R+Y YNGY +AL VF+ ESGQP E+ DR F+ EL ++E T +PLLY I +L+++RN R + + E H G S++ A +P+PV+F K
Sbjct: 4 DGGQATLSDLKEVLKDTLAARGSLDQIKARIRAEIFAALDDQD---VPKPKLSNENLIINELIREYFEYNGYRHALSVFLPESGQPAEKPFDRQFLSSELNVTEDPRFTH------VPLLYSIAASLQQKRNQEQQRERDFDVELQIDQFAAMPTHDNHEQHSFDEEPTHQATGRVVSLEGAKEPSPVIFKK 186
BLAST of mRNA_Ecto-sp13_S_contig7818.19071.1 vs. uniprot
Match: A0A8B7Y9V1_ACAPL (lisH domain-containing protein FOPNL-like n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7Y9V1_ACAPL) HSP 1 Score: 116 bits (290), Expect = 1.210e-27 Identity = 67/132 (50.76%), Postives = 89/132 (67.42%), Query Frame = 1
Query: 40 TIDDLKQALVENLEHRGVLGKLRAKVRAEVFHTLEGPQEGVLPTPLSNENMLINELVRDYLSYNGYGNALGVFMAESGQPIERSLDRGFVRDELGLSERRDSTDRGGARPLPLLYGI-THALKRRRNDASID 432
++ +LK L E LE RGVLG+++A+VRAEVFH L+ Q P PLSNENMLINEL+R+YL +N Y A V MAESGQP + LDR F+ +EL ++E RD+ +PLLYGI +H L+ +R + D
Sbjct: 3 SVQELKSVLRETLETRGVLGQIKARVRAEVFHALDD-QSDPRP-PLSNENMLINELIREYLEFNKYKYAASVLMAESGQP-QTPLDREFLVNELNITEDRDTAT------VPLLYGILSHFLQSKRTPVTRD 125
BLAST of mRNA_Ecto-sp13_S_contig7818.19071.1 vs. uniprot
Match: A0A1V9YC06_9STRA (LisH domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YC06_9STRA) HSP 1 Score: 116 bits (291), Expect = 1.900e-27 Identity = 63/134 (47.01%), Postives = 83/134 (61.94%), Query Frame = 1
Query: 40 TIDDLKQALVENLEHRGVLGKLRAKVRAEVFHTLEGPQEGVLPTPLSNENMLINELVRDYLSYNGYGNALGVFMAESGQPIERSLDRGFVRDELGLSERRDSTDRGGARPLPLLYGITHALKRRRNDASIDNRG 441
++ DLK AL E LE RG LG ++A++RAE+F L+ EG LSNEN++INEL+R+YL YNGY + L VF+ ESGQP ER R F+ EL ++E +PLLYGI AL+ DA N+G
Sbjct: 6 SLADLKDALKETLEARGTLGPIKARLRAEIFQALD---EGATKPKLSNENLIINELIREYLEYNGYRHTLSVFLPESGQPQERPFQRRFLAHELNITEDPRYNQ------VPLLYGIVTALQ----DAKASNQG 126 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7818.19071.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7818.19071.1 >prot_Ecto-sp13_S_contig7818.19071.1 ID=prot_Ecto-sp13_S_contig7818.19071.1|Name=mRNA_Ecto-sp13_S_contig7818.19071.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=135bp MLINELVRDYLSYNGYGNALGVFMAESGQPIERSLDRGFVRDELGLSERRback to top mRNA from alignment at Ecto-sp13_S_contig7818:3551..6056- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7818.19071.1 ID=mRNA_Ecto-sp13_S_contig7818.19071.1|Name=mRNA_Ecto-sp13_S_contig7818.19071.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2506bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7818:3551..6056- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7818:3551..6056- >mRNA_Ecto-sp13_S_contig7818.19071.1 ID=mRNA_Ecto-sp13_S_contig7818.19071.1|Name=mRNA_Ecto-sp13_S_contig7818.19071.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=405bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7818:3551..6056- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |