prot_Ecto-sp13_S_contig7385.18561.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7385.18561.1
Unique Nameprot_Ecto-sp13_S_contig7385.18561.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length223
Homology
BLAST of mRNA_Ecto-sp13_S_contig7385.18561.1 vs. uniprot
Match: D8LTH1_ECTSI (Shikimate Kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTH1_ECTSI)

HSP 1 Score: 436 bits (1120), Expect = 2.420e-154
Identity = 220/223 (98.65%), Postives = 221/223 (99.10%), Query Frame = 0
Query:    1 MRKSAGLSMEVEPHVLRLQAAELGSRLRGTNVFFVGMMGTGKSTVARALADVMGRYIFLDTDTIIEELLGASVGEVFAKDGEEAFRSVESQVLDQVHSYVKMCVATGGGIVSENKNWGKMQTGMVVWLDMEPKDIFERLSKDPEEVAKRPLLAGDDPQGKLEELLEKRKPQYAQADVTVQLKAEDGVDDITYNVVNTILEFIDSNPPKWQKWKEKANAAGIEW 223
            MR+SAGLSMEVEPHVLRLQAAELGSRLRGTNVFFVGMMGTGKSTVARALADVMGRYIFLDTDTIIEELLGASVGEVFAKDGEE FRSVESQVLDQVHSYVKMCVATGGGIVSENKNWGKMQTGMVVWLDMEPKDIFERLSKDPEEVAKRPLLAGDDPQGKLEELLEKRKPQYAQADVTVQLK EDGVDDITYNVVNTILEFIDSNPPKWQKWKEKANAAGIEW
Sbjct:    1 MRRSAGLSMEVEPHVLRLQAAELGSRLRGTNVFFVGMMGTGKSTVARALADVMGRYIFLDTDTIIEELLGASVGEVFAKDGEEGFRSVESQVLDQVHSYVKMCVATGGGIVSENKNWGKMQTGMVVWLDMEPKDIFERLSKDPEEVAKRPLLAGDDPQGKLEELLEKRKPQYAQADVTVQLKPEDGVDDITYNVVNTILEFIDSNPPKWQKWKEKANAAGIEW 223          
BLAST of mRNA_Ecto-sp13_S_contig7385.18561.1 vs. uniprot
Match: A0A6H5JIK7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIK7_9PHAE)

HSP 1 Score: 434 bits (1115), Expect = 1.740e-152
Identity = 219/223 (98.21%), Postives = 221/223 (99.10%), Query Frame = 0
Query:    1 MRKSAGLSMEVEPHVLRLQAAELGSRLRGTNVFFVGMMGTGKSTVARALADVMGRYIFLDTDTIIEELLGASVGEVFAKDGEEAFRSVESQVLDQVHSYVKMCVATGGGIVSENKNWGKMQTGMVVWLDMEPKDIFERLSKDPEEVAKRPLLAGDDPQGKLEELLEKRKPQYAQADVTVQLKAEDGVDDITYNVVNTILEFIDSNPPKWQKWKEKANAAGIEW 223
            MR+SAGLSMEVEPHVLRLQAAELGSRLRGTNVFFVGMMGTGKSTVARALADVMGRYIFLDTDTIIEELLGASVGEVFAKDGEEAFRSVESQVLDQVHSYVKMCVATGGGIVSENKNWGKMQTGMVVWLDM+PKDIFERLSKDPEEVAKRPLLAGDDPQGKLEELLEKRKPQYAQADVTVQLK EDGVDDITYNVVN ILEFIDSNPPKWQKWKEKANAAGIEW
Sbjct:   71 MRRSAGLSMEVEPHVLRLQAAELGSRLRGTNVFFVGMMGTGKSTVARALADVMGRYIFLDTDTIIEELLGASVGEVFAKDGEEAFRSVESQVLDQVHSYVKMCVATGGGIVSENKNWGKMQTGMVVWLDMKPKDIFERLSKDPEEVAKRPLLAGDDPQGKLEELLEKRKPQYAQADVTVQLKPEDGVDDITYNVVNAILEFIDSNPPKWQKWKEKANAAGIEW 293          
BLAST of mRNA_Ecto-sp13_S_contig7385.18561.1 vs. uniprot
Match: A0A835ZK89_9STRA (Shikimate kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZK89_9STRA)

HSP 1 Score: 251 bits (640), Expect = 3.910e-81
Identity = 125/214 (58.41%), Postives = 162/214 (75.70%), Query Frame = 0
Query:   16 LRLQAAELGSRLRGTNVFFVGMMGTGKSTVARALADVMGRYIFLDTDTIIEELLGASVGEVFAKDGEEAFRSVESQVLDQVHSYVKMCVATGGGIVSENKNWGKMQTGMVVWLDMEPKDIFERLSKDPEEVAKRPLLAGDDPQGKLEELLEKRKPQYAQA------DVTVQLKAEDGVDDITYNVVNTILEFIDSNPPKWQKWKEKANAAGIEW 223
            +RLQ AELGS+LRGTNV+FVGMMGTGK++VAR LAD MGRY F+DTD IIE+L+ A V +VF + GEE FR +E++VL+++HSYVK+ VATGGGIV E +NWGK+QTG+VVWLDM   DI +RLS + EEV+KR LL G D   KL+ + ++RK  Y QA      DV V +  +D VD +  + V+ + +FIDSNPPKWQ+WK+ A A+GI W
Sbjct:   18 IRLQTAELGSQLRGTNVYFVGMMGTGKTSVARNLADRMGRYTFMDTDAIIEQLMQAPVAKVFEEQGEEEFRDIEARVLNELHSYVKLVVATGGGIVKEKRNWGKLQTGLVVWLDMAIDDIVKRLSSNEEEVSKRSLLQGGDVAAKLQAIYDERKAMYEQASTSSSADVRVYVSPDDSVDAVVLSSVSELQKFIDSNPPKWQQWKDSAKASGINW 231          
BLAST of mRNA_Ecto-sp13_S_contig7385.18561.1 vs. uniprot
Match: A0A7R9UH62_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UH62_9STRA)

HSP 1 Score: 207 bits (527), Expect = 9.590e-64
Identity = 108/205 (52.68%), Postives = 138/205 (67.32%), Query Frame = 0
Query:    6 GLSMEV-EPHVLRLQAAELGSRLRGTNVFFVGMMGTGKSTVARALADVMGRYIFLDTDTIIEELLGASVGEVFAKDGEEAFRSVESQVLDQVHSYVKMCVATGGGIVSENKNWGKMQTGMVVWLDMEPKDIFERLSKDPEEVAKRPLLAGDDPQGKLEELLEKRKPQYAQADVTVQLKAEDGVDDITYNVVNTILEFIDSNPPKW 209
            GL  +V E   +  +   L SRL GT+++FVGMMGTGKST  R LA  +  Y FLDTDT+IE   G     +F K+GEE FR++ES V+DQ  +Y ++C+ATGGG V  N+NWGKMQTG+VVWL MEP++I ER S + EEV KRPLL G D   KL E+L+KRK +Y  ADV VQL   D V+++   V   I  F+D NPPK+
Sbjct:   38 GLRADVQEEKAVEDEFTRLASRLYGTSIYFVGMMGTGKSTTGRELAKKLPGYSFLDTDTVIEAYAGQDCSAIFEKEGEEGFRNIESMVMDQACAYRRLCIATGGGAVLRNQNWGKMQTGIVVWLQMEPEEIAERFSGNDEEVEKRPLLQGGDAVDKLREILDKRKEKYEVADVHVQLSPGDSVEEVVERVCGKIHRFMDENPPKF 242          
BLAST of mRNA_Ecto-sp13_S_contig7385.18561.1 vs. uniprot
Match: A0A6U3Q8M5_9STRA (Shikimate kinase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3Q8M5_9STRA)

HSP 1 Score: 208 bits (529), Expect = 1.710e-63
Identity = 107/219 (48.86%), Postives = 153/219 (69.86%), Query Frame = 0
Query:    6 GLSMEVEPHVLRLQAAELGSRLRGTNVFFVGMMGTGKSTVARALADVMGRYIFLDTDTIIEELLGASVGEVFAKDGEEAFRSVESQVLDQVHSYVKMCVATGGGIVSENKNWGKMQTGMVVWLDMEPKDIFERLSKDPEEVAKRPLLAGDDPQGKLEELLEKRKPQYAQADVTVQLKAED-GVDDITYNVVNTILEFIDSNPPKWQKWKEKANAAGIEW 223
            G  M ++P      A  LG RL+G+N++FVGMMG+GKS V  A+A  MG Y FLDTDTIIE +  A++ E+FA++GE+ FR +ESQVLD VH++V+  V+TGGGIV +  NW K+Q+G+V+W+D+ P  I+ R+ KD ++   RPLL  D+P   LE+LLE+RKP+Y+QADV +++  E   ++D+   VV  +  FID NPP W+  K KA A G++W
Sbjct:   85 GEGMTIDP------ARLLGPRLQGSNLYFVGMMGSGKSAVGDAVARRMGSYNFLDTDTIIESVTNATITEIFAQEGEDTFRDIESQVLDSVHAHVRCVVSTGGGIVKKLSNWAKLQSGVVIWIDVPPSVIYNRI-KDKDD---RPLLQNDNPLETLEKLLEERKPRYSQADVRIEVNDESMSIEDVASKVVQDLHNFIDENPPAWKIAKAKAQAEGLDW 293          
BLAST of mRNA_Ecto-sp13_S_contig7385.18561.1 vs. uniprot
Match: A0A7S1Z366_TRICV (Shikimate kinase n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z366_TRICV)

HSP 1 Score: 202 bits (514), Expect = 6.800e-61
Identity = 103/218 (47.25%), Postives = 147/218 (67.43%), Query Frame = 0
Query:    6 GLSMEVEPHVLRLQAAELGSRLRGTNVFFVGMMGTGKSTVARALADVMGRYIFLDTDTIIEELLGASVGEVFAKDGEEAFRSVESQVLDQVHSYVKMCVATGGGIVSENKNWGKMQTGMVVWLDMEPKDIFERLSKDPEEVAKRPLLAGDDPQGKLEELLEKRKPQYAQADVTVQLKAEDGVDDITYNVVNTILEFIDSNPPKWQKWKEKANAAGIEW 223
            G  M+++P      A  LG RL+G+N++F+GMMG+GKS V   +A  MG Y FLDTD+IIE+  G ++ E+F  +GEE FR VE Q+LD VH+YV+  V+TGGGIV   +NW K+QTG+VVWLD++P+ I +R+  D      RPLL  DDP  KL++LL +R+ +YAQAD+ +++  +   D +   V+  +  FID NPP W+K K KA A G++W
Sbjct:  112 GEGMKIDP------ARLLGPRLQGSNLYFIGMMGSGKSAVGDIVARRMGTYNFLDTDSIIEKATGMTIPEIFEAEGEEGFRQVEGQILDSVHAYVRCVVSTGGGIVCRLQNWAKLQTGLVVWLDVDPEVIIKRIEGD----ENRPLLQTDDPLKKLKDLLGEREERYAQADLRIEVTEDMDEDAVANMVIKELHYFIDENPPAWKKAKAKAQADGLDW 319          
BLAST of mRNA_Ecto-sp13_S_contig7385.18561.1 vs. uniprot
Match: A0A7R9ZGS2_9STRA (Shikimate kinase n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZGS2_9STRA)

HSP 1 Score: 200 bits (508), Expect = 2.580e-60
Identity = 102/218 (46.79%), Postives = 145/218 (66.51%), Query Frame = 0
Query:    6 GLSMEVEPHVLRLQAAELGSRLRGTNVFFVGMMGTGKSTVARALADVMGRYIFLDTDTIIEELLGASVGEVFAKDGEEAFRSVESQVLDQVHSYVKMCVATGGGIVSENKNWGKMQTGMVVWLDMEPKDIFERLSKDPEEVAKRPLLAGDDPQGKLEELLEKRKPQYAQADVTVQLKAEDGVDDITYNVVNTILEFIDSNPPKWQKWKEKANAAGIEW 223
            G  M+++P      A  LG RL+G+N++FVGMMG+GKS V   +A  MG Y FLDTD IIE+    S+ E+F  +GEE FR  E+QVLD VH+YV+  ++TGGG+V    NW K+QTG+V+WLD++P+ I +R+  D      RPLL  DDP  KL++LLE+R+ +Y+QADV +++  +   + +   VV  +  FID NPP W+K K KA A G++W
Sbjct:   87 GEGMKIDP------ARLLGPRLQGSNLYFVGMMGSGKSAVGDVVARRMGTYNFLDTDEIIEKATAMSIPEIFDAEGEEGFREAEAQVLDSVHAYVRCVISTGGGLVCRMGNWSKLQTGVVIWLDVDPELIIKRIEGD----TNRPLLQADDPLQKLKDLLEERREKYSQADVRIEVTEDMDENAVADLVVKELHNFIDENPPAWKKAKAKAQAEGLDW 294          
BLAST of mRNA_Ecto-sp13_S_contig7385.18561.1 vs. uniprot
Match: A0A7S1XQA2_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XQA2_9STRA)

HSP 1 Score: 197 bits (500), Expect = 8.010e-60
Identity = 101/209 (48.33%), Postives = 137/209 (65.55%), Query Frame = 0
Query:    9 MEVEPHVLRLQAAELGSRLRGTNVFFVGMMGTGKSTVARALADVMGRYIFLDTDTIIEELLGASVGEVFAKDGEEAFRSVESQVLDQVHSYVKMCVATGGGIVSENKNWGKMQTGMVVWLDMEPKDIFERLSKDPEEVAKRPLLAGDDPQGKLEELLEKRKPQYAQADVTVQLKAEDGVDDITYNVVNTILEFIDSNPPKWQKWKEKAN 217
            +E EP     +   L  RL+G +++ VGMMGTGKST  + LA  MG Y FLDTDT+IE   G     +F ++GEEAFR +E+ V+DQ  +Y ++CVATGGG+V   KNW KMQTG+VVWL+M+P DI ERLS   +EV KRPLLA  DP  KL E+L++R+ +YA AD+T+ +        +   V + +  FID NPP++ +  E AN
Sbjct:   35 LEQEPD----EYVRLAERLQGASLYLVGMMGTGKSTAGKELAKRMGGYSFLDTDTVIEAYAGRDCATIFEEEGEEAFRDIETMVMDQACAYKRLCVATGGGMVLRTKNWSKMQTGIVVWLNMDPADIAERLSASSDEVTKRPLLAEADPAAKLTEILDERRDRYAIADITLDMTKXXXXXXVVRMVCSRVHSFIDKNPPRFTESSEYAN 239          
BLAST of mRNA_Ecto-sp13_S_contig7385.18561.1 vs. uniprot
Match: K0RFC3_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RFC3_THAOC)

HSP 1 Score: 198 bits (503), Expect = 8.880e-60
Identity = 96/201 (47.76%), Postives = 141/201 (70.15%), Query Frame = 0
Query:   23 LGSRLRGTNVFFVGMMGTGKSTVARALADVMGRYIFLDTDTIIEELLGASVGEVFAKDGEEAFRSVESQVLDQVHSYVKMCVATGGGIVSENKNWGKMQTGMVVWLDMEPKDIFERLSKDPEEVAKRPLLAGDDPQGKLEELLEKRKPQYAQADVTVQLKAEDGVDDITYNVVNTILEFIDSNPPKWQKWKEKANAAGIEW 223
            L  RLRG N++ +GMMG+GKS V  ALA  MG Y FLDTD I+E  +G S+ E+F K+GE+AFR  E+QVLD VH++V+  + TGGG+V+ N+NW K+QTG+V++L  +P+ I++R+     E   RPLL  DDP   L++L E+R+ +Y QADVT++++    V+ +T   +  + +FID NPP W++ KEKA A G++W
Sbjct:   81 LSPRLRGCNLYLIGMMGSGKSAVGDALARRMGTYNFLDTDVILERAVGMSIPEIFEKEGEDAFRDAEAQVLDSVHAHVRCVIGTGGGLVTRNQNWAKLQTGLVLYLKTDPETIYKRI-----EGTDRPLLQTDDPLATLKDLTEERRGKYEQADVTIEVEDGMDVEAVTDMCIRMLHDFIDDNPPAWKQAKEKAQADGLDW 276          
BLAST of mRNA_Ecto-sp13_S_contig7385.18561.1 vs. uniprot
Match: K0SPY6_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SPY6_THAOC)

HSP 1 Score: 198 bits (503), Expect = 9.990e-60
Identity = 96/201 (47.76%), Postives = 141/201 (70.15%), Query Frame = 0
Query:   23 LGSRLRGTNVFFVGMMGTGKSTVARALADVMGRYIFLDTDTIIEELLGASVGEVFAKDGEEAFRSVESQVLDQVHSYVKMCVATGGGIVSENKNWGKMQTGMVVWLDMEPKDIFERLSKDPEEVAKRPLLAGDDPQGKLEELLEKRKPQYAQADVTVQLKAEDGVDDITYNVVNTILEFIDSNPPKWQKWKEKANAAGIEW 223
            L  RLRG N++ +GMMG+GKS V  ALA  MG Y FLDTD I+E  +G S+ E+F K+GE+AFR  E+QVLD VH++V+  + TGGG+V+ N+NW K+QTG+V++L  +P+ I++R+     E   RPLL  DDP   L++L E+R+ +Y QADVT++++    V+ +T   +  + +FID NPP W++ KEKA A G++W
Sbjct:   85 LSPRLRGCNLYLIGMMGSGKSAVGDALARRMGTYNFLDTDVILERAVGMSIPEIFEKEGEDAFRDAEAQVLDSVHAHVRCVIGTGGGLVTRNQNWAKLQTGLVLYLKTDPETIYKRI-----EGTDRPLLQTDDPLATLKDLTEERRGKYEQADVTIEVEDGMDVEAVTDMCIRMLHDFIDDNPPAWKQAKEKAQADGLDW 280          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7385.18561.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTH1_ECTSI2.420e-15498.65Shikimate Kinase n=1 Tax=Ectocarpus siliculosus Ta... [more]
A0A6H5JIK7_9PHAE1.740e-15298.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZK89_9STRA3.910e-8158.41Shikimate kinase n=1 Tax=Tribonema minus TaxID=303... [more]
A0A7R9UH62_9STRA9.590e-6452.68Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A6U3Q8M5_9STRA1.710e-6348.86Shikimate kinase n=1 Tax=Ditylum brightwellii TaxI... [more]
A0A7S1Z366_TRICV6.800e-6147.25Shikimate kinase n=2 Tax=Trieres chinensis TaxID=1... [more]
A0A7R9ZGS2_9STRA2.580e-6046.79Shikimate kinase n=1 Tax=Pseudictyota dubia TaxID=... [more]
A0A7S1XQA2_9STRA8.010e-6048.33Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
K0RFC3_THAOC8.880e-6047.76Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
K0SPY6_THAOC9.990e-6047.76Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01100SHIKIMTKNASEcoord: 85..93
score: 45.3
coord: 123..140
score: 29.91
coord: 32..47
score: 51.92
coord: 103..112
score: 54.62
NoneNo IPR availableGENE3D3.40.50.300coord: 14..208
e-value: 1.9E-49
score: 170.4
NoneNo IPR availablePANTHERPTHR21087:SF16SHIKIMATE KINASE 1, CHLOROPLASTICcoord: 14..192
NoneNo IPR availablePANTHERPTHR21087SHIKIMATE KINASEcoord: 14..192
IPR031322Shikimate kinase/gluconokinasePFAMPF01202SKIcoord: 38..198
e-value: 2.1E-39
score: 135.1
IPR000623Shikimate kinase/Threonine synthase-like 1HAMAPMF_00109Shikimate_kinasecoord: 29..199
score: 23.23
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 30..194

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7385contigEcto-sp13_S_contig7385:6..3082 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7385.18561.1mRNA_Ecto-sp13_S_contig7385.18561.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7385 6..3082 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7385.18561.1 ID=prot_Ecto-sp13_S_contig7385.18561.1|Name=mRNA_Ecto-sp13_S_contig7385.18561.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=223bp
MRKSAGLSMEVEPHVLRLQAAELGSRLRGTNVFFVGMMGTGKSTVARALA
DVMGRYIFLDTDTIIEELLGASVGEVFAKDGEEAFRSVESQVLDQVHSYV
KMCVATGGGIVSENKNWGKMQTGMVVWLDMEPKDIFERLSKDPEEVAKRP
LLAGDDPQGKLEELLEKRKPQYAQADVTVQLKAEDGVDDITYNVVNTILE
FIDSNPPKWQKWKEKANAAGIEW
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031322Shikimate/glucono_kinase
IPR000623Shikimate_kinase/TSH1
IPR027417P-loop_NTPase