prot_Ecto-sp13_S_contig7339.18502.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7339.18502.1
Unique Nameprot_Ecto-sp13_S_contig7339.18502.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length148
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7339.18502.1 vs. uniprot
Match: A0A835YQE8_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQE8_9STRA)

HSP 1 Score: 135 bits (339), Expect = 6.760e-34
Identity = 67/135 (49.63%), Postives = 94/135 (69.63%), Query Frame = 0 
Query:   10 VQNQFAVVLSWDEVRALQKLYGDPDSESIDFMKFAVALGKSPGHGPDKSRRAYNFLPKHTTEYDLKAIEKKIMHKLEDRCEVAGNYQYQWARRMLCDSTSTLAGGMDKEQLKLRLSGLLGVELSDGEMDVLFRKY 144
            V++QFA+ L+ +E+ ALQ  Y      ++DF++FA AL K+P +G D++R  +NFLP      DL+ +E+ +  K+ DR  +AGNYQYQ A RMLCD+   LAGGM +E LKLR+S LLGVE++D E+D LF KY
Sbjct:    2 VESQFALALTVEEMVALQTRYPGNQPGTVDFLQFAEALSKTPQYGLDRTRGCFNFLPASKGNRDLQGLERDMRQKITDRLHLAGNYQYQSAYRMLCDANYQLAGGMGREDLKLRVSELLGVEINDREVDALFSKY 136
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7339.18502.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YQE8_9STRA6.760e-3449.63EF-hand domain-containing protein n=1 Tax=Tribonem... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7339contigEcto-sp13_S_contig7339:33..1663 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7339.18502.1mRNA_Ecto-sp13_S_contig7339.18502.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7339 33..1663 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7339.18502.1 ID=prot_Ecto-sp13_S_contig7339.18502.1|Name=mRNA_Ecto-sp13_S_contig7339.18502.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=148bp
MSMDEFKRQVQNQFAVVLSWDEVRALQKLYGDPDSESIDFMKFAVALGKS
PGHGPDKSRRAYNFLPKHTTEYDLKAIEKKIMHKLEDRCEVAGNYQYQWA
RRMLCDSTSTLAGGMDKEQLKLRLSGLLGVELSDGEMDVLFRKYADP*
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