prot_Ecto-sp13_S_contig73251.18492.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig73251.18492.1
Unique Nameprot_Ecto-sp13_S_contig73251.18492.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length161
Homology
BLAST of mRNA_Ecto-sp13_S_contig73251.18492.1 vs. uniprot
Match: D8LP74_ECTSI (EsV-1-41 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP74_ECTSI)

HSP 1 Score: 241 bits (615), Expect = 2.330e-79
Identity = 125/156 (80.13%), Postives = 130/156 (83.33%), Query Frame = 0
Query:    5 IYESLCETSASFSDVSESNINMVRCPFYEKPVDEIQRVQRAKCGKRSQKHRSTAQSRLGDMTVGDIRYCFQQLRNAGKDLGPDMMLYNGQSAGEFALKYLRETSTATRKRRKILSMVTIRSVSDKKGGDGRRGTDNAFSVSGCTPSRDSGLNVLEF 160
            IY SLCET A  SDV E NINM RCPFYEKPVDEIQ  Q AK  KRSQ+HRSTAQSRLGDMTVGDIRYCFQQLRNAGKDL PDMMLYNGQSAGEFALKYLRETSTATRKRRK LS+V  RSV++KK   GRRG DNA S+ GCT  R  GLNVLEF
Sbjct:   10 IYTSLCETPAHSSDVGEPNINMARCPFYEKPVDEIQSTQSAKYAKRSQRHRSTAQSRLGDMTVGDIRYCFQQLRNAGKDLSPDMMLYNGQSAGEFALKYLRETSTATRKRRKSLSVVARRSVANKKDSGGRRGKDNALSMDGCTSRRAPGLNVLEF 165          
BLAST of mRNA_Ecto-sp13_S_contig73251.18492.1 vs. uniprot
Match: Q8QNM3_ESV1K (EsV-1-41 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNM3_ESV1K)

HSP 1 Score: 232 bits (591), Expect = 8.050e-76
Identity = 126/165 (76.36%), Postives = 133/165 (80.61%), Query Frame = 0
Query:    1 MNDD-----IYESLCETSASFSDVSESNINMVRCPFYEKPVDEIQRVQRAKCGKRSQKHRSTAQSRLGDMTVGDIRYCFQQLRNAGKDLGPDMMLYNGQSAGEFALKYLRETSTATRKRRKILSMVTIRSVSDKKGGDGRRGTDNAFSVSGCTPSRDSGLNVLEF 160
            MNDD     IY+SLCETS   SDVSE +INMVRCPFYEKPVDEIQ +Q AK  KRSQ+HRSTAQSRLGDMTVGDIRYCFQQLRNAGKDL PDMMLYNGQSAGEFALKYLRETSTATRKRRK  SMV  RSV+++K        D AFSV GCT    SGLNVLEF
Sbjct:    1 MNDDTLEKNIYKSLCETSTPSSDVSEPSINMVRCPFYEKPVDEIQSIQSAKYAKRSQRHRSTAQSRLGDMTVGDIRYCFQQLRNAGKDLSPDMMLYNGQSAGEFALKYLRETSTATRKRRKSSSMVASRSVANRK--------DTAFSVDGCTSIGASGLNVLEF 157          
BLAST of mRNA_Ecto-sp13_S_contig73251.18492.1 vs. uniprot
Match: Q6XM45_9PHYC (FirrV-1-A42 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM45_9PHYC)

HSP 1 Score: 100 bits (249), Expect = 2.940e-24
Identity = 58/110 (52.73%), Postives = 74/110 (67.27%), Query Frame = 0
Query:   25 NMVRCPFYEKPVDEIQRVQRAKCGKRSQKHRSTAQSRLGDMTVGDIRYCFQQLRNAGKDLGPDMMLYNGQSAGEFALKYLRETSTATRKRRKILSMVTIRSVSDKKGGDG 134
            N VR PF E  +  +   +  K  KR+Q++RSTA+SR+  MTVGDIRYCFQQLRNA  DL PD +LYNGQ AGEFAL YL ETS + +K+R+ +        S ++ GDG
Sbjct:    4 NKVRYPFTETHLTHLTSTK--KKNKRTQRYRSTAKSRICGMTVGDIRYCFQQLRNANADLCPDFVLYNGQCAGEFALSYLIETSNSMKKKRQHVE------ESSQQSGDG 105          
BLAST of mRNA_Ecto-sp13_S_contig73251.18492.1 vs. uniprot
Match: B5LWK5_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWK5_9PHYC)

HSP 1 Score: 95.9 bits (237), Expect = 1.930e-22
Identity = 51/89 (57.30%), Postives = 64/89 (71.91%), Query Frame = 0
Query:   27 VRCPFYEKPVDEIQRVQRAKCGKRSQKHRSTAQSRLGDMTVGDIRYCFQQLRNAGKDLGPDMMLYNGQSAGEFALKYLRETSTATRKRR 115
            VR PF E P   +      K  KR+Q++RSTA+SR+  MTVGDIRYCFQQLRNAG  L P+ +LYNGQ AGEFAL YL ETS + ++++
Sbjct:   10 VRDPFAENPYRPL-----VKKTKRTQRYRSTAKSRICGMTVGDIRYCFQQLRNAGNQLCPEFVLYNGQCAGEFALSYLIETSNSMKRKK 93          
BLAST of mRNA_Ecto-sp13_S_contig73251.18492.1 vs. uniprot
Match: A0A835Z8A2_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8A2_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 8.250e-7
Identity = 25/54 (46.30%), Postives = 38/54 (70.37%), Query Frame = 0
Query:   55 RSTAQSRLGDMTVGDIRYCFQQLRNAGKDLGPDMMLYNGQSAGEFALKYLRETS 108
            +S  +SR+G +TVGD+RY F QLR    D+ P+  L+ G+SAG F+L YL +++
Sbjct:   33 KSATRSRIGTLTVGDVRYIFTQLRGYS-DINPNRTLWTGESAGSFSLNYLLQSN 85          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig73251.18492.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LP74_ECTSI2.330e-7980.13EsV-1-41 n=1 Tax=Ectocarpus siliculosus TaxID=2880... [more]
Q8QNM3_ESV1K8.050e-7676.36EsV-1-41 n=1 Tax=Ectocarpus siliculosus virus 1 (i... [more]
Q6XM45_9PHYC2.940e-2452.73FirrV-1-A42 n=1 Tax=Feldmannia irregularis virus a... [more]
B5LWK5_9PHYC1.930e-2257.30Uncharacterized protein n=1 Tax=Feldmannia species... [more]
A0A835Z8A2_9STRA8.250e-746.30Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig73251contigEcto-sp13_S_contig73251:13..495 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig73251.18492.1mRNA_Ecto-sp13_S_contig73251.18492.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig73251 13..498 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig73251.18492.1 ID=prot_Ecto-sp13_S_contig73251.18492.1|Name=mRNA_Ecto-sp13_S_contig73251.18492.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=161bp
MNDDIYESLCETSASFSDVSESNINMVRCPFYEKPVDEIQRVQRAKCGKR
SQKHRSTAQSRLGDMTVGDIRYCFQQLRNAGKDLGPDMMLYNGQSAGEFA
LKYLRETSTATRKRRKILSMVTIRSVSDKKGGDGRRGTDNAFSVSGCTPS
RDSGLNVLEF*
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