prot_Ecto-sp13_S_contig731.18472.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig731.18472.1
Unique Nameprot_Ecto-sp13_S_contig731.18472.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length303
Homology
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BLAST of mRNA_Ecto-sp13_S_contig731.18472.1 vs. uniprot
Match: A0A6H5KMS3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KMS3_9PHAE)

HSP 1 Score: 233 bits (593), Expect = 5.380e-72
Identity = 144/180 (80.00%), Postives = 145/180 (80.56%), Query Frame = 0 
Query:    1 MKCTTFLLSASIVTLSPSRDG-ALGFVLGPGLAMRRGNPTTTHDRRLMCHHHGLARPSSSGSIYD-RTSGGARRKTIPRALGG-SSPSDGADDDSIGGXXSSVGDGAGGLSGDGERATGE-EEAEQQSLASLVESTFVLAAAGNSYEMGLKAFISTIKEAYERGYTVPALTMEVSFVPTK 176
            MKC TFLLSASIVTLSPSRDG ALGFVLGPGLAMRRG PTTTHDRR MCHHHGLA PSSSGSI D RTSGGAR +TIPRALGG SSPSDGADD     XX                     EEAEQQSLASLVESTFVLAAAGNSYEMGLKAFISTIKEAYERGYTVPALTMEVSFVPTK
Sbjct:    1 MKCVTFLLSASIVTLSPSRDGGALGFVLGPGLAMRRGKPTTTHDRRRMCHHHGLASPSSSGSICDSRTSGGARWRTIPRALGGTSSPSDGADDXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEAEQQSLASLVESTFVLAAAGNSYEMGLKAFISTIKEAYERGYTVPALTMEVSFVPTK 180
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BLAST of mRNA_Ecto-sp13_S_contig731.18472.1 vs. uniprot
Match: A0A836CF30_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF30_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 8.100e-5
Identity = 33/69 (47.83%), Postives = 46/69 (66.67%), Query Frame = 0 
Query:  106 GLSGDGERATGEEEAEQQS----LASLVESTFVLAAAGNSYEMGLKAFISTIKEAYERGYTVPALTMEV 170
            GLSG+   ++G  E+  QS    LAS+VE +FV+A +   Y  GL+AFIS I +AYE G+ VP L+ME+
Sbjct:   52 GLSGELSDSSGGGESSPQSSAADLASIVERSFVVACSEGDYTRGLQAFISAIMKAYESGFAVPTLSMEI 120
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig731.18472.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KMS3_9PHAE5.380e-7280.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CF30_9STRA8.100e-547.83Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..15
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..302
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..24

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig731contigEcto-sp13_S_contig731:4099..6080 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig731.18472.1mRNA_Ecto-sp13_S_contig731.18472.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig731 4068..6148 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig731.18472.1 ID=prot_Ecto-sp13_S_contig731.18472.1|Name=mRNA_Ecto-sp13_S_contig731.18472.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=303bp
MKCTTFLLSASIVTLSPSRDGALGFVLGPGLAMRRGNPTTTHDRRLMCHH
HGLARPSSSGSIYDRTSGGARRKTIPRALGGSSPSDGADDDSIGGSSSSV
GDGAGGLSGDGERATGEEEAEQQSLASLVESTFVLAAAGNSYEMGLKAFI
STIKEAYERGYTVPALTMEVSFVPTKVVLAYNCCPVSSPSHPCSSVSFVF
LLSTRSSYLSMVSPTSIDLSRLREIRCWLAMLHGTLFPCLLISIQGSGVL
TSSPWSLICAPEYIAFFSLVSLFEALDFCGVAQGCRRDEELTAAPTRNSV
VV*
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