prot_Ecto-sp13_S_contig7306.18468.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7306.18468.1
Unique Nameprot_Ecto-sp13_S_contig7306.18468.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length114
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7306.18468.1 vs. uniprot
Match: A0A6H5KW93_9PHAE (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW93_9PHAE)

HSP 1 Score: 166 bits (421), Expect = 1.650e-45
Identity = 99/104 (95.19%), Postives = 99/104 (95.19%), Query Frame = 0 
Query:   10 AAGAGDNSVFDRLPYSYTESERKRRQPEAAPAPPAIPASSNPGTGRQPFSTRRSSQDKEAVAVSXXXXXXXXXXAGGPQNPLLPSRRSVELENGGGRSDERGGR 113
            AAGAGDNSVFDRLPYSYTESERKRRQPEAAPAPPAIPASSNP TGRQPFS RRSSQDKEAVAVS XXXXXXXXX GGPQNPLLPSRRSVELE GGGRSDERGGR
Sbjct: 1967 AAGAGDNSVFDRLPYSYTESERKRRQPEAAPAPPAIPASSNPSTGRQPFSIRRSSQDKEAVAVSAXXXXXXXXX-GGPQNPLLPSRRSVELEPGGGRSDERGGR 2069
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BLAST of mRNA_Ecto-sp13_S_contig7306.18468.1 vs. uniprot
Match: D8LNZ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNZ6_ECTSI)

HSP 1 Score: 89.7 bits (221), Expect = 1.490e-18
Identity = 55/100 (55.00%), Postives = 56/100 (56.00%), Query Frame = 0 
Query:   14 GDNSVFDRLPYSYTESERKRRQPEAAPAPPAIPASSNPGTGRQPFSTRRSSQDKEAVAVSXXXXXXXXXXAGGPQNPLLPSRRSVELENGGGRSDERGGR 113
            GDNSVF+RLPYSYTESERKRRQPEAAPAPPAIPASSNP T                                           SVELENGGGRSDERGGR
Sbjct:  872 GDNSVFNRLPYSYTESERKRRQPEAAPAPPAIPASSNPSTS------------------------------------------SVELENGGGRSDERGGR 929
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7306.18468.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KW93_9PHAE1.650e-4595.19Kinesin motor domain-containing protein n=1 Tax=Ec... [more]
D8LNZ6_ECTSI1.490e-1855.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7306contigEcto-sp13_S_contig7306:2237..3735 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7306.18468.1mRNA_Ecto-sp13_S_contig7306.18468.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7306 2144..5212 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7306.18468.1 ID=prot_Ecto-sp13_S_contig7306.18468.1|Name=mRNA_Ecto-sp13_S_contig7306.18468.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=114bp
MHNNAAIGGAAGAGDNSVFDRLPYSYTESERKRRQPEAAPAPPAIPASSN
PGTGRQPFSTRRSSQDKEAVAVSAAAAAAAATAAGGPQNPLLPSRRSVEL
ENGGGRSDERGGR*
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