prot_Ecto-sp13_S_contig7277.18428.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7277.18428.1
Unique Nameprot_Ecto-sp13_S_contig7277.18428.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length354
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7277.18428.1 vs. uniprot
Match: D7FWJ1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWJ1_ECTSI)

HSP 1 Score: 351 bits (900), Expect = 1.210e-114
Identity = 260/277 (93.86%), Postives = 261/277 (94.22%), Query Frame = 0 
Query:   81 NRLARNKKGRKPGDVFSPTVEDDKKERIKIMLGMGAADASAQPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYKGNGDV---SGSTAGVPPPAYKPPMSARPDPAPSAASLADSSYQYPDPSPANSPSSAMLNSTATVMSEAVLSTAVGEGGRGGGTSGATSMGNGGGLTSXXXXXXXEPKQVSXXXXXXXXXSATSRSAAGVQTTPRVDVNGSAEMNRIKAELSAKNQQLQQMQLKVEEYKDNLHQAQTTSTRELDDADV 354
            NRLARNKKGRKPGDVFSPTVEDDKKERIKIMLGMG ADASAQP A    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SYKGNGDV   +GSTAGVPPPAYKPPMSARPDPAPSAASLADSSYQYPDPSPANSPSSAMLNSTATVMSEAVLSTAVGEGGRGGGTSGATSMGNGGGLT XXXXXXX PKQV XXXXXXXXX ATSRSAAGVQTTPRVD  GSAEMNRIKAELSAKNQQLQQMQLKVEEYKDNLHQAQTTSTRELDDADV
Sbjct:  181 NRLARNKKGRKPGDVFSPTVEDDKKERIKIMLGMGTADASAQPAAASTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSYKGNGDVPGSTGSTAGVPPPAYKPPMSARPDPAPSAASLADSSYQYPDPSPANSPSSAMLNSTATVMSEAVLSTAVGEGGRGGGTSGATSMGNGGGLTXXXXXXXXXPKQVXXXXXXXXXXXATSRSAAGVQTTPRVDAKGSAEMNRIKAELSAKNQQLQQMQLKVEEYKDNLHQAQTTSTRELDDADV 457
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7277.18428.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FWJ1_ECTSI1.210e-11493.86Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 307..344
NoneNo IPR availablePANTHERPTHR24188ANKYRIN REPEAT PROTEINcoord: 1..97
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 55..84
e-value: 0.0023
score: 27.2
coord: 22..51
e-value: 1.6E-4
score: 31.0
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 22..54
score: 14.426
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 55..87
score: 10.526
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 1..81
e-value: 1.1E-11
score: 45.2
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..92
score: 29.627
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..129
e-value: 4.3E-28
score: 99.9
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 1..93

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7277contigEcto-sp13_S_contig7277:531..4911 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7277.18428.1mRNA_Ecto-sp13_S_contig7277.18428.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7277 531..4911 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7277.18428.1 ID=prot_Ecto-sp13_S_contig7277.18428.1|Name=mRNA_Ecto-sp13_S_contig7277.18428.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=354bp
GNLDIVTGLINFNANLEARNKDNLSPLHVAAGMGHIDVTKRLLDNGADME
AEDNALYTPLWRAAYYGHPEVVEVLLDKGANRLARNKKGRKPGDVFSPTV
EDDKKERIKIMLGMGAADASAQPTAASTPAAASAASTAPTSAVENGVQAA
RGTGGTVGGKGGSAGGSSYKGNGDVSGSTAGVPPPAYKPPMSARPDPAPS
AASLADSSYQYPDPSPANSPSSAMLNSTATVMSEAVLSTAVGEGGRGGGT
SGATSMGNGGGLTSAGGGSGGEPKQVSVGVGGSGEGSATSRSAAGVQTTP
RVDVNGSAEMNRIKAELSAKNQQLQQMQLKVEEYKDNLHQAQTTSTRELD
DADV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf