prot_Ecto-sp13_S_contig72249.18352.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig72249.18352.1
Unique Nameprot_Ecto-sp13_S_contig72249.18352.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length88
Homology
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BLAST of mRNA_Ecto-sp13_S_contig72249.18352.1 vs. uniprot
Match: D8LCJ6_ECTSI (YHYH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCJ6_ECTSI)

HSP 1 Score: 120 bits (302), Expect = 3.830e-32
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0 
Query:   31 MMINGVAVYSSYADDRAATTYGAAAAKLHGDTTDLCGGSTTADGVYHYHNAPGCLQEQ 88
            MMINGVAVYSSYADDRAATTYGAAAAKLHGDTTDLCGGSTTADGVYHYHNAPGCLQEQ
Sbjct:    1 MMINGVAVYSSYADDRAATTYGAAAAKLHGDTTDLCGGSTTADGVYHYHNAPGCLQEQ 58
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BLAST of mRNA_Ecto-sp13_S_contig72249.18352.1 vs. uniprot
Match: D7FUL4_ECTSI (YHYH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUL4_ECTSI)

HSP 1 Score: 66.2 bits (160), Expect = 9.430e-11
Identity = 35/69 (50.72%), Postives = 44/69 (63.77%), Query Frame = 0 
Query:   20 TNLSDVSGPVGMMINGVAVYSSYADDRAATTYGAAAAKLHGDTTDLCGGSTTADGVYHYHNAPGCLQEQ 88
            T+LS  +G +G+M NGV++YS++A D A   Y   A  L  DT D CGG  T  G YHYH+  GCLQEQ
Sbjct:  135 TDLSSAAGTIGLMRNGVSMYSAWALD-AVEEYEDTAFYLEADTLDPCGGHATPTGSYHYHSTAGCLQEQ 202
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BLAST of mRNA_Ecto-sp13_S_contig72249.18352.1 vs. uniprot
Match: A0A6H5KP42_9PHAE (YHYH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KP42_9PHAE)

HSP 1 Score: 65.5 bits (158), Expect = 1.740e-10
Identity = 34/69 (49.28%), Postives = 43/69 (62.32%), Query Frame = 0 
Query:   20 TNLSDVSGPVGMMINGVAVYSSYADDRAATTYGAAAAKLHGDTTDLCGGSTTADGVYHYHNAPGCLQEQ 88
            T+LS  +G +G+M NGV+++S++A D A   Y   A  L  DT D CGG  T  G YHYH   GCLQEQ
Sbjct:  120 TDLSSAAGTIGLMRNGVSMFSAWAVD-AVVEYEDTAFYLEADTFDPCGGHATPTGAYHYHGTAGCLQEQ 187
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig72249.18352.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LCJ6_ECTSI3.830e-32100.00YHYH domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FUL4_ECTSI9.430e-1150.72YHYH domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A6H5KP42_9PHAE1.740e-1049.28YHYH domain-containing protein n=2 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig72249contigEcto-sp13_S_contig72249:210..681 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig72249.18352.1mRNA_Ecto-sp13_S_contig72249.18352.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig72249 210..681 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig72249.18352.1 ID=prot_Ecto-sp13_S_contig72249.18352.1|Name=mRNA_Ecto-sp13_S_contig72249.18352.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=88bp
AVSVDVNGSPWFRGGIDRATNLSDVSGPVGMMINGVAVYSSYADDRAATT
YGAAAAKLHGDTTDLCGGSTTADGVYHYHNAPGCLQEQ
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