prot_Ecto-sp13_S_contig72177.18344.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig72177.18344.1
Unique Nameprot_Ecto-sp13_S_contig72177.18344.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length104
Homology
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BLAST of mRNA_Ecto-sp13_S_contig72177.18344.1 vs. uniprot
Match: A0A6H5KZ61_9PHAE (Complex1_LYR_dom domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ61_9PHAE)

HSP 1 Score: 165 bits (418), Expect = 6.150e-51
Identity = 94/103 (91.26%), Postives = 95/103 (92.23%), Query Frame = 0 
Query:    1 MEGAMGIYYHGFAREHIVAHREEDDAKRVEHLLDKGAQNLRFVLRKYRMTEPRPPEPLGTPERTRTKKTRXXXXXXXXXXXDRQEAEGAAGWSNDSSTWTPGR 103
            MEGAMG YYHGFAREHIVAHREEDDA+RVEHLLDKG QNLRFVLRKYRMTEPRPPE LGTPERTRTKKT XXXXXXXXXXX   EAEGAAGW NDSSTWTPGR
Sbjct:   21 MEGAMGNYYHGFAREHIVAHREEDDAERVEHLLDKGEQNLRFVLRKYRMTEPRPPESLGTPERTRTKKTXXXXXXXXXXXXXXXEAEGAAGWGNDSSTWTPGR 123
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BLAST of mRNA_Ecto-sp13_S_contig72177.18344.1 vs. uniprot
Match: C1MM80_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MM80_MICPC)

HSP 1 Score: 49.7 bits (117), Expect = 1.080e-5
Identity = 24/40 (60.00%), Postives = 30/40 (75.00%), Query Frame = 0 
Query:    8 YYHGFAREHIVAHREEDDAKRVEHLLDKGAQNLRFVLRKY 47
            YY   ARE  VAHR+EDDA RVE ++ K  ++LR+VLRKY
Sbjct:   26 YYAVVAREKFVAHRDEDDAARVELIVRKSREDLRWVLRKY 65
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BLAST of mRNA_Ecto-sp13_S_contig72177.18344.1 vs. uniprot
Match: L8GED1_ACACA (Complex 1 protein (Lyr family) protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GED1_ACACA)

HSP 1 Score: 48.1 bits (113), Expect = 4.590e-5
Identity = 18/44 (40.91%), Postives = 32/44 (72.73%), Query Frame = 0 
Query:    4 AMGIYYHGFAREHIVAHREEDDAKRVEHLLDKGAQNLRFVLRKY 47
            A  IYY+ +AR H + H+EE+D +RV+ ++++G  +LR++  KY
Sbjct:   36 ATRIYYYNYARTHFMQHQEEEDEERVQEIIERGKNDLRWLKAKY 79
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig72177.18344.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KZ61_9PHAE6.150e-5191.26Complex1_LYR_dom domain-containing protein n=1 Tax... [more]
C1MM80_MICPC1.080e-560.00Predicted protein n=1 Tax=Micromonas pusilla (stra... [more]
L8GED1_ACACA4.590e-540.91Complex 1 protein (Lyr family) protein n=1 Tax=Aca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig72177contigEcto-sp13_S_contig72177:31..642 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig72177.18344.1mRNA_Ecto-sp13_S_contig72177.18344.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig72177 31..648 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig72177.18344.1 ID=prot_Ecto-sp13_S_contig72177.18344.1|Name=mRNA_Ecto-sp13_S_contig72177.18344.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=104bp
MEGAMGIYYHGFAREHIVAHREEDDAKRVEHLLDKGAQNLRFVLRKYRMT
EPRPPEPLGTPERTRTKKTRRQQAAAKQRAADRQEAEGAAGWSNDSSTWT
PGR*
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