prot_Ecto-sp13_S_contig7193.18308.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7193.18308.1
Unique Nameprot_Ecto-sp13_S_contig7193.18308.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length193
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7193.18308.1 vs. uniprot
Match: D7FUI5_ECTSI (Sept5, septin GTPase, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUI5_ECTSI)

HSP 1 Score: 233 bits (594), Expect = 1.330e-69
Identity = 135/195 (69.23%), Postives = 152/195 (77.95%), Query Frame = 0 
Query:    1 MEVLMDERKTWTETSEEAQVLDEPATQSTGTQTSDSAMMPDDGSSRNSQSLGKTEETTSSPSTGNPEIESDMPV-SIYYILGYAALSVLLALCGLVASDSRAFLKVGSRVFATPRKRSSLSCEARRLNTIPGRPHGVANGALGDLPGNPRGGAGRSDHLCPECHGA--IVERGEG-GAETRYDDHVHLILPTSTL 191
            MEVLMD+RK WTETSEEAQV D+PAT+S GT+TS S  +PDDGSSRN+QSLG TEE TSSPSTG+PEI+S++PV SIY ILGY+ALS+LLA+CGLV     AFLK  SRV +T  K  SL  E RR+N  PGRPHGVANGALGDL G+PRGGAGR    C ECHG+   VERGE  G ETRYDDHVH IL  ST 
Sbjct:  366 MEVLMDDRKIWTETSEEAQVPDKPATRSAGTRTSGSTTIPDDGSSRNNQSLGSTEEPTSSPSTGDPEIKSNLPVNSIYCILGYSALSLLLAICGLVVLVVAAFLKACSRVVSTVCKCLSLFRERRRVNAYPGRPHGVANGALGDLRGSPRGGAGRFGPFCSECHGSCTFVERGESAGGETRYDDHVHRILSASTF 560
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BLAST of mRNA_Ecto-sp13_S_contig7193.18308.1 vs. uniprot
Match: A0A6H5JEJ7_9PHAE (Septin-type G domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEJ7_9PHAE)

HSP 1 Score: 231 bits (588), Expect = 9.870e-69
Identity = 139/202 (68.81%), Postives = 143/202 (70.79%), Query Frame = 0 
Query:    1 MEVLMDERKTWTETSEEAQ-------------------------VLDEPATQSTGTQTSDSAMMPDDGSSRNSQSLGKTEETTSSPSTGNPEIESDMPVSIYYILGYAALSVLLALCGLVASDSRAFLKVGSRVFATPRKRSSLSCEARRLNTIPGRPHGVANGALGDLPGNPRGGAGRSDHLCPECHGAIVERGEGGAETR 177
            MEVLMD+RK WTETSEEAQ                         V DEPATQST TQTS S MMPDDGSSRNSQSL KTEE TS  ST NP IESD PVSIYYILGY+ALSVLLA CGLV     AFLKVGS VFAT  K SSL  EAR  NTI GRPHGVANGALGDL GNPRGGAGRSDHLC E HG +VERGEGG   +
Sbjct:  353 MEVLMDDRKMWTETSEEAQREAPSGRKAATIGKDPAAKGTDHPQVPDEPATQSTATQTSGSVMMPDDGSSRNSQSLRKTEEATSFSSTSNPAIESDKPVSIYYILGYSALSVLLATCGLVVWAVVAFLKVGSHVFATAFKCSSLFREARGSNTIAGRPHGVANGALGDLHGNPRGGAGRSDHLCQEYHGTLVERGEGGCRDK 554
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7193.18308.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FUI5_ECTSI1.330e-6969.23Sept5, septin GTPase, incomplete sequence n=1 Tax=... [more]
A0A6H5JEJ7_9PHAE9.870e-6968.81Septin-type G domain-containing protein n=1 Tax=Ec... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 97..192
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 76..96
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..75
NoneNo IPR availableTMHMMTMhelixcoord: 74..96

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7193contigEcto-sp13_S_contig7193:4752..5588 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7193.18308.1mRNA_Ecto-sp13_S_contig7193.18308.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7193 4371..7395 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7193.18308.1 ID=prot_Ecto-sp13_S_contig7193.18308.1|Name=mRNA_Ecto-sp13_S_contig7193.18308.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=193bp
MEVLMDERKTWTETSEEAQVLDEPATQSTGTQTSDSAMMPDDGSSRNSQS
LGKTEETTSSPSTGNPEIESDMPVSIYYILGYAALSVLLALCGLVASDSR
AFLKVGSRVFATPRKRSSLSCEARRLNTIPGRPHGVANGALGDLPGNPRG
GAGRSDHLCPECHGAIVERGEGGAETRYDDHVHLILPTSTLK*
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