mRNA_Ecto-sp13_S_contig7193.18308.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig7193.18308.1
Unique NamemRNA_Ecto-sp13_S_contig7193.18308.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig7193.18308.1 vs. uniprot
Match: D7FUI5_ECTSI (Sept5, septin GTPase, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUI5_ECTSI)

HSP 1 Score: 660 bits (1704), Expect = 2.920e-230
Identity = 386/571 (67.60%), Postives = 422/571 (73.91%), Query Frame = 1
Query:    1 KSDSMTVDEMFDFKKAIADSAAQANGLEFFNFSERVREKCLAALNIADGPIWLGERRPPPYAVISSQVDDPNGKAHAPDPVRR*YPWGECHVMRPEHSDNTYLRCLLLEVGFQDMKDKMRKRYEAFKKQE--PLVTRIGEKIREYRLAIASGKPSIILVVLAVICALVAVILATTEVHALLEIRPPDNAVVITTFSLSQVNVNEPSTGLADWSEVILKIQQVEGLDRVVTAVDSE*ETLDVLMEVLMDERKTWTETSEEAQVLDEPATQSTGTQTSDSAMMPDDGSSRNSQSLGKTEETTSSPSTGNPEIESDMPV-SIYYILGYAALSVLLALCGLVASDSRAFLKVGSRVFATPRKRSSLSCEARRLNTIPGRPHGVANGALGDLPGNPRGGAGRSDHLCPECHGA--IVERGEG-GAETRYDDHVHLILPTSTLK*V--VSTPFPPSSLLRRLPASLSFRIPHHKAHELHSKKGPPHRTQISLNQRLGLTAHKREAPPLPPTVFLLKRRGRCGTRGSWTSPVPLNWTCRESFHLL---LCNSRLPLPFVGVFCGE*EVCKERLIAALW 1680
            KSDSMTVDEM  FKKAI DSAAQANG+EFFNFSER   KCL ALNIAD PIWLGERRPPPYAVISSQVDDPNG AHAPDPVRR YPWG+CHVMRPEHSDNTYL+CLLLEVGFQDMKD+MRKRYEAFK +E  PLV  IGEKIREYR  IASGKPSI+ VVLAVICA+VAVILA T+VH                     VN NEPSTGLADWSEVILKIQQ+EG DR++TA+D   E L VLMEVLMD+RK WTETSEEAQV D+PAT+S GT+TS S  +PDDGSSRN+QSLG TEE TSSPSTG+PEI+S++PV SIY ILGY+ALS+LLA+CGLV     AFLK  SRV +T  K  SL  E RR+N  PGRPHGVANGALGDL G+PRGGAGR    C ECHG+   VERGE  G ETRYDDHVH IL  ST   V  V   F  ++   RL   L  RI H KA +L SKKG P+R QI++N                  VFL KRR   GTRGS TSPVPLN   R  F  +    CNSRLPLPFVGVFCGE EVCKERLIA LW
Sbjct:  142 KSDSMTVDEMIGFKKAIVDSAAQANGVEFFNFSERAWGKCLGALNIADEPIWLGERRPPPYAVISSQVDDPNGNAHAPDPVRR-YPWGDCHVMRPEHSDNTYLQCLLLEVGFQDMKDEMRKRYEAFKTEEAKPLVIVIGEKIREYRHPIASGKPSILFVVLAVICAIVAVILAHTQVH-----------------KGYCVNGNEPSTGLADWSEVILKIQQLEGSDRILTAIDPGEEPLYVLMEVLMDDRKIWTETSEEAQVPDKPATRSAGTRTSGSTTIPDDGSSRNNQSLGSTEEPTSSPSTGDPEIKSNLPVNSIYCILGYSALSLLLAICGLVVLVVAAFLKACSRVVSTVCKCLSLFRERRRVNAYPGRPHGVANGALGDLRGSPRGGAGRFGPFCSECHGSCTFVERGESAGGETRYDDHVHRILSASTFTSVFRVVPAFVAATSSTRL--LLIVRI-HRKAQKLQSKKGTPNRKQIAMNXXXXXXXXXXXXXXXXXMVFLRKRRSPWGTRGSRTSPVPLNRIGRGQFTTICVHFCNSRLPLPFVGVFCGEWEVCKERLIATLW 691          
BLAST of mRNA_Ecto-sp13_S_contig7193.18308.1 vs. uniprot
Match: A0A6H5JEJ7_9PHAE (Septin-type G domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEJ7_9PHAE)

HSP 1 Score: 583 bits (1504), Expect = 5.260e-200
Identity = 336/444 (75.68%), Postives = 346/444 (77.93%), Query Frame = 1
Query:    1 KSDSMTVDEMFDFKKAIADSAAQANGLEFFNFSERVREKCLAALNIADGPIWLGERRPPPYAVISSQVDDPNGKAHAPDPVRR*YPWGECHVMRPEHSDNTYLRCLLLEVGFQDMKDKMRKRYEAFKKQEP--LVTRIGEKIREYRLAIASGKPSIILVVLAVICALVAVILATTEVHALLEIRPPDNAVVITTFSLSQVNVNEPSTGLADWSEVILKIQQVEGLDRVVTAVDSE*ETLDVLMEVLMDERKTWTETSEEAQ-------------------------VLDEPATQSTGTQTSDSAMMPDDGSSRNSQSLGKTEETTSSPSTGNPEIESDMPVSIYYILGYAALSVLLALCGLVASDSRAFLKVGSRVFATPRKRSSLSCEARRLNTIPGRPHGVANGALGDLPGNPRGGAGRSDHLCPECHGAIVERGEGGAETR 1251
            KSDSMTVDEM DFKKAIADSAAQANGLEFFNFSER  EKCLAALNIAD PIWLGERRPPPYAVISSQVDDPNGKAHAPDPVRR YPWGECHVMRPEHSDNTYL+CLLLEVGFQDMKD+M+KRYEAFKKQE   LVTRIGEKI EYRLAIASGKPSII VVLA+I   VAVILATTE                       VN+NEPSTGLADWSEVILKIQQV+G DRVVTAVDS  ETLDVLMEVLMD+RK WTETSEEAQ                         V DEPATQST TQTS S MMPDDGSSRNSQSL KTEE TS  ST NP IESD PVSIYYILGY+ALSVLLA CGLV     AFLKVGS VFAT  K SSL  EAR  NTI GRPHGVANGALGDL GNPRGGAGRSDHLC E HG +VERGEGG   +
Sbjct:  135 KSDSMTVDEMIDFKKAIADSAAQANGLEFFNFSERAWEKCLAALNIADEPIWLGERRPPPYAVISSQVDDPNGKAHAPDPVRR-YPWGECHVMRPEHSDNTYLQCLLLEVGFQDMKDEMKKRYEAFKKQEAKLLVTRIGEKIWEYRLAIASGKPSIISVVLALIFTFVAVILATTE-----------------------VNLNEPSTGLADWSEVILKIQQVKGSDRVVTAVDSGEETLDVLMEVLMDDRKMWTETSEEAQREAPSGRKAATIGKDPAAKGTDHPQVPDEPATQSTATQTSGSVMMPDDGSSRNSQSLRKTEEATSFSSTSNPAIESDKPVSIYYILGYSALSVLLATCGLVVWAVVAFLKVGSHVFATAFKCSSLFREARGSNTIAGRPHGVANGALGDLHGNPRGGAGRSDHLCQEYHGTLVERGEGGCRDK 554          
BLAST of mRNA_Ecto-sp13_S_contig7193.18308.1 vs. uniprot
Match: D8LDE5_ECTSI (Sept2, septin GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDE5_ECTSI)

HSP 1 Score: 378 bits (970), Expect = 4.190e-123
Identity = 206/254 (81.10%), Postives = 213/254 (83.86%), Query Frame = 1
Query:    1 KSDSMTVDEMFDFKKAIADSAAQANGLEFFNFSERVREKCLAALNIADGPIWLGERRPPPYAVISSQVDDPNGKAHAPDPVRR*YPWGECHVMRPEHSDNTYLRCLLLEVGFQDMKDKMRKRYEAFKKQE--PLVTRIGEKIREYRLAIASGKPSIILVVLAVICALVAVILATTEVHALLEIRPPDNAVVITTFSLSQVNVNEPSTGLADWSEVILKIQQVEGLDRVVTAVDSE*ETLDVLMEVLMDERKTWT 756
            KSDSMTVDEMFDFKKAIADSAA+ANGLEFF FSER  EKCLAALNIAD PIWLGERRPPPYAVISSQVDDPNG AHA DPVRR YPWGECHVMRPEHSDNTYL+CLLLEVGFQDMKDKMRKRYEAFKKQE  PLVTR+GEK REYRLAIASGKPS ILVVLAVI A VAVILA T+VHA                    VN NEPSTGLADW E+ILKIQQVEG DR+VT VDSE ETLDVLM+VLMD RK WT
Sbjct:  190 KSDSMTVDEMFDFKKAIADSAAKANGLEFFTFSERAWEKCLAALNIADEPIWLGERRPPPYAVISSQVDDPNGNAHAHDPVRR-YPWGECHVMRPEHSDNTYLQCLLLEVGFQDMKDKMRKRYEAFKKQEAKPLVTRVGEKNREYRLAIASGKPSTILVVLAVIFAFVAVILAATQVHA--------------------VNGNEPSTGLADWRELILKIQQVEGSDRIVTTVDSEEETLDVLMKVLMDNRKIWT 422          
BLAST of mRNA_Ecto-sp13_S_contig7193.18308.1 vs. uniprot
Match: D8LDE4_ECTSI (Sept1, septin GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDE4_ECTSI)

HSP 1 Score: 196 bits (498), Expect = 5.530e-53
Identity = 123/265 (46.42%), Postives = 167/265 (63.02%), Query Frame = 1
Query:    1 KSDSMTVDEMFDFKKAIADSAAQANGLEFFNFSERVREKCLAALNIADGPIWLGERRPPPYAVISSQVDDPNGKAHAPDPVRR*YPWGECHVMRPEHSDNTYLRCLLLEVGFQDMKDKMRKRYEAFKKQEP---------LVTRIGEKIREYRLAI---ASGK--PSIILVVLAVICALVAVILATTEVHALLEIR--PPDNAVVITTFSLSQVNVNEPSTGLADWSEVILKIQQVEGLDRVVTAVDSE*ETLDVLMEVLMDERK 747
            KSDSMTVDEM DFK  I D AAQ N LEFF FS+    +CL  L     P WLGER+PPPYAVISS+VD+P+G     +P RR YPWG C VM   HSDNTYL+CLLLEVGFQDMKD+M+ RY+AF K++          ++  +  +     L +   A G+   S++ + +A +CA+VAV+LA    + L  +   PP          +    ++ P  GLADW++VI KIQ++EG +R++ AV+S  E LDVL++VL+++ K
Sbjct:  191 KSDSMTVDEMKDFKTGIVDLAAQDNELEFFQFSDTSWNECLTTLGFTATPDWLGERQPPPYAVISSKVDEPHGGLIR-NPARR-YPWGTCRVMETTHSDNTYLQCLLLEVGFQDMKDEMKARYKAFVKEQTRPITEVTVGVIKSLPRRASYAALNVVHEAEGRRPKSVLALTMAAVCAMVAVMLA----YLLCGVSGAPP----------ILGGGMHNPPEGLADWAKVIEKIQELEGWERILAAVNSGGEHLDVLIDVLIEDYK 439          
BLAST of mRNA_Ecto-sp13_S_contig7193.18308.1 vs. uniprot
Match: A0A6H5JBY2_9PHAE (Septin-type G domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBY2_9PHAE)

HSP 1 Score: 196 bits (498), Expect = 7.750e-53
Identity = 124/265 (46.79%), Postives = 165/265 (62.26%), Query Frame = 1
Query:    1 KSDSMTVDEMFDFKKAIADSAAQANGLEFFNFSERVREKCLAALNIADGPIWLGERRPPPYAVISSQVDDPNGKAHAPDPVRR*YPWGECHVMRPEHSDNTYLRCLLLEVGFQDMKDKMRKRYEAFKKQEP---------LVTRIGEKIREYRLAIA----SGKP-SIILVVLAVICALVAVILA--TTEVHALLEIRPPDNAVVITTFSLSQVNVNEPSTGLADWSEVILKIQQVEGLDRVVTAVDSE*ETLDVLMEVLMDERK 747
            KSDSMTVDEM DFK AI D AAQ N L+FF FSE    +CL AL     P WLGER+PPPYAVISS+VD+P+G     +P RR YPWG C VM   HS+NTYL+CLLLEVGFQD+KD+M  RY AF K++          ++  +  +  +  L +A      +P S++ + +A +CAL AV+LA     VH      PP          L +  +  P+ GLA+W++VI K+Q++EG DR++ A DS  E LDVL++VL++  K
Sbjct:  194 KSDSMTVDEMKDFKAAIVDLAAQDNELKFFQFSEMSWNECLTALGFTVTPSWLGERQPPPYAVISSKVDEPHGGLFR-NPARR-YPWGTCRVMETTHSENTYLQCLLLEVGFQDIKDEMTARYRAFVKEQTRPMTEVTVGVIKCLPRRASKAALNVAHEAQGRRPKSVLALTMATVCALAAVMLAYLCCGVHG----TPP---------ILGRGGMYNPAEGLANWAKVIEKMQELEGWDRILAAPDSGEEHLDVLIDVLVEHYK 443          
BLAST of mRNA_Ecto-sp13_S_contig7193.18308.1 vs. uniprot
Match: D7FUI7_ECTSI (Sept3, septin GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUI7_ECTSI)

HSP 1 Score: 195 bits (495), Expect = 1.710e-52
Identity = 120/253 (47.43%), Postives = 161/253 (63.64%), Query Frame = 1
Query:    1 KSDSMTVDEMFDFKKAIADSAAQANGLEFFNFSERVREKCLAALNIADGPIWLGERRPPPYAVISSQVDDPNGKAHAPDPVRR*YPWGECHVMRPEHSDNTYLRCLLLEVGFQDMKDKMRKRYEAFKKQE--PLVTRIGEKIREYRLAIAS-----GKPSIILVVLAVICALVAVILATTEVHALLEIRPPDNAVVITTFSLSQVNVNEPSTGLADWSEVILKIQQVEGLDRVVTAVDSE*ETLDVLMEVLMD 738
            KSDSMTVDEM +FK AI D AAQ + L+FF FSE    +C  AL   D P WLGER+PPPYAVISS+VD+ +    +P   RR YPWG CHVM   HSDNTYL+CLLLEVGFQDMK +M+ RY+AF K++  P      + I+     +A      G+ S+++++ AV+CALVAV+LA   +   +   PP          +    +  P   LA+W++VI KIQ++EG DR++ A DS  E L +L++VLM+
Sbjct:  201 KSDSMTVDEMKEFKTAIVDLAAQDDQLKFFQFSETSWNECKGALGPTDPPNWLGERQPPPYAVISSKVDESHRGIRSP--ARR-YPWGTCHVMETAHSDNTYLQCLLLEVGFQDMKKEMKTRYKAFVKEQTRPTTEVTVDAIKRLPRWVAHKVQGRGRKSVLVLISAVVCALVAVVLA--HLRCGVNGTPP----------IEGGGMYNPPESLANWAKVIEKIQKLEGWDRILAAADSGEEHLAILIDVLME 438          
BLAST of mRNA_Ecto-sp13_S_contig7193.18308.1 vs. uniprot
Match: I2CR08_NANGC (Sporulation-regulated protein 3 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CR08_NANGC)

HSP 1 Score: 64.3 bits (155), Expect = 3.420e-7
Identity = 43/128 (33.59%), Postives = 65/128 (50.78%), Query Frame = 1
Query:    1 KSDSMTVDEMFDFKKAIADSAAQANGLEFFNFSERVREKCLAALNIADGPIWLGERRPPPYAVISS-QVDDPNGKAHAPDPVRR*YPWGECHVMRPEHSDNTYLRCLLLEVGFQDMKDKMRKRYEAFK 381
            K+DSMT +E   F+  + + A Q + +  F+F    + +     ++            PP+AV++S Q D+  G      PVR  Y WG C     EHSD TYL+ LLLE GF D++    +RY A++
Sbjct:  356 KADSMTAEETLAFRSFVFE-ACQHHAIRLFDFGSEAKRRVGIPTDLVA----------PPFAVVASNQFDEVKGSGSF-WPVRD-YHWGTCEAFSTEHSDCTYLKKLLLEEGFHDLRQATEERYMAYR 470          
BLAST of mRNA_Ecto-sp13_S_contig7193.18308.1 vs. uniprot
Match: A0A4D9CXY9_9STRA (Septin-type G domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CXY9_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 4.240e-7
Identity = 43/128 (33.59%), Postives = 65/128 (50.78%), Query Frame = 1
Query:    1 KSDSMTVDEMFDFKKAIADSAAQANGLEFFNFSERVREKCLAALNIADGPIWLGERRPPPYAVISS-QVDDPNGKAHAPDPVRR*YPWGECHVMRPEHSDNTYLRCLLLEVGFQDMKDKMRKRYEAFK 381
            K+DSMT +E   F+  + + A Q + +  F+F    + +     ++            PP+AV++S Q D+  G      PVR  Y WG C     EHSD TYL+ LLLE GF D++    +RY A++
Sbjct:  340 KADSMTAEETLAFRSFVFE-ACQHHAIRLFDFGSEAKRRVGIPTDLVA----------PPFAVVASNQFDEVKGSGSF-WPVRD-YHWGTCEAFSTEHSDCTYLKKLLLEEGFHDLRQATEERYMAYR 454          
BLAST of mRNA_Ecto-sp13_S_contig7193.18308.1 vs. uniprot
Match: A0A8J9WRU9_9CHLO (Probable Septin-7 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WRU9_9CHLO)

HSP 1 Score: 63.9 bits (154), Expect = 5.110e-7
Identity = 46/134 (34.33%), Postives = 71/134 (52.99%), Query Frame = 1
Query:    1 KSDSMTVDEMFDFKKAIADSAAQANGLEFFNFSERVREKCLAALNIADGPIWLGERRP-PPYAVISSQVDDPN-GKAHAPDPVRR*YPWGECHVMRPEHSDNTYLRCLLLEVGFQDMKDKMRKRYEAFKKQEPL 396
            K+DSMTV+E+ DF++ + D+ A A      +      E+ L A          G RR  PP+A+++S   D + G+     PVRR YPWG C  +   HSD   L+ LL E G++++K    +RY  ++ Q+ L
Sbjct:  302 KADSMTVEELRDFRRHVQDALAHAGRAHKKDLLHAFSEEALDA---------AGARRDAPPFAIVASTTMDLSVGRFW---PVRR-YPWGTCEALSSVHSDVGALKRLLFEEGYEELKAATEERYYHYRSQQLL 422          
BLAST of mRNA_Ecto-sp13_S_contig7193.18308.1 vs. uniprot
Match: W7TQT1_9STRA (Septin 7 (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TQT1_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 1.030e-6
Identity = 40/124 (32.26%), Postives = 61/124 (49.19%), Query Frame = 1
Query:   13 MTVDEMFDFKKAIADSAAQANGLEFFNFSERVREKCLAALNIADGPIWLGERRPPPYAVISS-QVDDPNGKAHAPDPVRR*YPWGECHVMRPEHSDNTYLRCLLLEVGFQDMKDKMRKRYEAFK 381
            MT +E   F+  + + A Q + +  F+F    + +     ++            PP+AV++S Q D+  G      PVR  Y WG C     EHSD TYL+ LLLE GF D++    +RY A++
Sbjct:    1 MTAEETLAFRSFVFE-ACQHHAIRLFDFGSEAKRRVGIPTDLVA----------PPFAVVASNQFDEVKGSGSF-WPVRD-YHWGTCEAFSTEHSDCTYLKKLLLEEGFHDLRQATEERYMAYR 111          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7193.18308.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D7FUI5_ECTSI2.920e-23067.60Sept5, septin GTPase, incomplete sequence n=1 Tax=... [more]
A0A6H5JEJ7_9PHAE5.260e-20075.68Septin-type G domain-containing protein n=1 Tax=Ec... [more]
D8LDE5_ECTSI4.190e-12381.10Sept2, septin GTPase n=1 Tax=Ectocarpus siliculosu... [more]
D8LDE4_ECTSI5.530e-5346.42Sept1, septin GTPase n=1 Tax=Ectocarpus siliculosu... [more]
A0A6H5JBY2_9PHAE7.750e-5346.79Septin-type G domain-containing protein n=1 Tax=Ec... [more]
D7FUI7_ECTSI1.710e-5247.43Sept3, septin GTPase n=1 Tax=Ectocarpus siliculosu... [more]
I2CR08_NANGC3.420e-733.59Sporulation-regulated protein 3 (Fragment) n=1 Tax... [more]
A0A4D9CXY9_9STRA4.240e-733.59Septin-type G domain-containing protein n=1 Tax=Na... [more]
A0A8J9WRU9_9CHLO5.110e-734.33Probable Septin-7 n=1 Tax=Coccomyxa sp. Obi TaxID=... [more]
W7TQT1_9STRA1.030e-632.26Septin 7 (Fragment) n=1 Tax=Nannochloropsis gadita... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7193contigEcto-sp13_S_contig7193:4371..7395 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score237.3
Seed ortholog evalue6.1e-60
Seed eggNOG ortholog2880.D7FUI5
Model size1680
KEGG koko:K16944
Hectar predicted targeting categoryother localisation
Exons7
EggNOG free text desc.ATPase. Has a role at an early stage in the morphogenesis of the spore coat
EggNOG OGsCOG5019@1,KOG1547@2759
Ec32 ortholog descriptionSept5, septin GTPase, incomplete sequence
Ec32 orthologEc-21_003840.1
Cds size579
COG Functional cat.DZ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131,ko04147,ko04812
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7193.18308.1prot_Ecto-sp13_S_contig7193.18308.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig7193 4752..5588 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463985.0164852-UTR-Ecto-sp13_S_contig7193:4370..47511681463985.0164852-UTR-Ecto-sp13_S_contig7193:4370..4751Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig7193 4371..4751 -
1681463985.053555-UTR-Ecto-sp13_S_contig7193:5588..56511681463985.053555-UTR-Ecto-sp13_S_contig7193:5588..5651Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig7193 5589..5651 -
1681463985.0639424-UTR-Ecto-sp13_S_contig7193:5877..59861681463985.0639424-UTR-Ecto-sp13_S_contig7193:5877..5986Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig7193 5878..5986 -
1681463985.074419-UTR-Ecto-sp13_S_contig7193:6126..62841681463985.074419-UTR-Ecto-sp13_S_contig7193:6126..6284Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig7193 6127..6284 -
1681463985.0851977-UTR-Ecto-sp13_S_contig7193:6645..67841681463985.0851977-UTR-Ecto-sp13_S_contig7193:6645..6784Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig7193 6646..6784 -
1681463985.0973673-UTR-Ecto-sp13_S_contig7193:6940..70911681463985.0973673-UTR-Ecto-sp13_S_contig7193:6940..7091Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig7193 6941..7091 -
1681463985.1067488-UTR-Ecto-sp13_S_contig7193:7295..73951681463985.1067488-UTR-Ecto-sp13_S_contig7193:7295..7395Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig7193 7296..7395 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463985.0316525-CDS-Ecto-sp13_S_contig7193:4751..52731681463985.0316525-CDS-Ecto-sp13_S_contig7193:4751..5273Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7193 4752..5273 -
1681463985.0427961-CDS-Ecto-sp13_S_contig7193:5531..55881681463985.0427961-CDS-Ecto-sp13_S_contig7193:5531..5588Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7193 5532..5588 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig7193.18308.1

>prot_Ecto-sp13_S_contig7193.18308.1 ID=prot_Ecto-sp13_S_contig7193.18308.1|Name=mRNA_Ecto-sp13_S_contig7193.18308.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=193bp
MEVLMDERKTWTETSEEAQVLDEPATQSTGTQTSDSAMMPDDGSSRNSQS
LGKTEETTSSPSTGNPEIESDMPVSIYYILGYAALSVLLALCGLVASDSR
AFLKVGSRVFATPRKRSSLSCEARRLNTIPGRPHGVANGALGDLPGNPRG
GAGRSDHLCPECHGAIVERGEGGAETRYDDHVHLILPTSTLK*
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mRNA from alignment at Ecto-sp13_S_contig7193:4371..7395-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig7193.18308.1 ID=mRNA_Ecto-sp13_S_contig7193.18308.1|Name=mRNA_Ecto-sp13_S_contig7193.18308.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3025bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7193:4371..7395- (Ectocarpus species13 EcNAP12_S_4_19m)
AAGTCCGACAGTATGACGGTCGACGAGATGTTTGACTTCAAAAAGGCCAT CGCCGACTCAGCCGCCCAGGCAAACGGCCTCGAGTTCTTCAACTTTTCGG GTGGGTGGTGTTTGGGACGTATTGAGGCTTCCCCGGTGACACTACGATGC AGCTTTCCGCCCCCCTTCGGAGGCTAGGGATAACCGTAGGCGCTTACACC TTGTTGTAGTTTTCCTGTTTCTCCGTACACGTCACTTGATGACTGACTAA CAGCAAGAGTCACATTAATCCCTGTTTCCGTTGCTCAATGATACTGTCGG GCAGAGCGGGTACGGGAAAAGTGCTTGGCAGCCCTCAACATTGCCGATGG ACCCATCTGGCTGGGAGAGAGGCGGCCACCACCGTACGCGGTGATATCAA GCCAGGTTGACGACCCCAACGGAAAAGCTCACGCTCCCGATCCAGTACGC AGGTGGTATAACTGTATTCGAGCCCGTGCGTGTCTGGCCTGTGCAAAAAA TAATGACTTTTGGCGTAAGGAACCATTCCTCTCCACCGAAAGCCCTCGAG ACTAACCAAAGTCCAACGCTTAATCTCGTTTCCGGTTGCACCAACAACCC TGGTCTCACAGATATCCGTGGGGTGAGTGTCATGTTATGAGACCGGAGCA CAGCGACAATACTTACCTTCGATGCCTCCTTCTGGAGGTGGGGTTCCAGG ACATGAAGGACAAGATGAGAAAGCGCTATGAAGCATTCAAAAAGCAAGAG GTTCAGAGAAAAAGCTGCAACTCGTCGACTTCCTCGAATTTGTGTGTGTT GCGGCAGCCCTTGGAGAGTTGTTGGTTCGATAAATTCATTTGGGCATGAA TGATCACCACCATGTGCAGTGGGTGATTTTTTTTAAGCATGGGTGGCTCC TGTTGGAAATACTTTCTAGGTGCAATGACGTGTCGAACAAAGCTACTGCA GCGTGTCAACAAGGGGAGTCAGCGTTTTTCTACTGTACGGTGTACCACGA TCAACGTTCTGGACACTGGTTACGTCTGAACTACCGTGTCGGTGTCGCTG TACTTGTCCTCCCCACTGGTCCCATGCCTCCTGACAACGCATCACGATCG TACAAGCGAAGCCTCTGGTGACCCGAATCGGAGAGAAAATTCGGGAGTAT CGCCTTGCCATTGCCTCCGGCAAGCCCTCGATTATCTTGGTGGTGCTGGC GGTGATTTGCGCTCTTGTGGCGGTTATTCTGGCAACCACTGAGGTACATG CGCTGCTAGAGATCCGCCCGTTTGCATGCCTTGAATTCGTCCTAGATTGT GCTTCGTTTGATCATCCAGTTAAAAACAGTGGCATGATGCCATGGTCGCA GTGGCATTGGGCTCCTCCATCGTGACTTTGAAATCGGTTGGAAACATGAA AACCTGAAGACCTGACAATGCCGTTGTTATCACAACTTTTTCACTTTCTC AGGTTAACGTAAACGAGCCTTCCACGGGTCTGGCTGATTGGAGCGAAGTA ATTCTCAAGATTCAGCAGGTGAGGTGGTGTGCTGCTTCGAGGGCCTTTCC ATGCGTAGCACATACCAGAGGATAATTTCGCGAGAAGTTGACATTACAAG CCAACGATGGATAGGTCTTCGTATCTTGTGGTGCTTGGCACTCATCAGCG CTTAACGTAGGCTCGTGTGCCAGCTTCCTACCCAATATACTCTTTACAGC TGTAAAGGGCGTTGAAGCCCTTTTTGCGGTGGAAATCTTGACAGGTCGAA GGATTGGACCGAGTCGTGACAGCCGTGGATTCCGAGTAGGAAACCCTCGA CGTCCTTATGGAGGTGCTGATGGACGAACGCAAGACTTGGACGGAAACCT CCGAAGAGGCGCAGGTCGGCCTTGCCGTTTTCCTCATACTATCGTGGTAC GGTTGTTGAACAACGGAGAGGGGGGTTGCTGAGACAAGATACGATGGTCA CGTCGCCTGATTCTCCCAACAGGAGCGAAAAGGAGAGATTTCCGCGTTGT TCTCACCTCCAGGATTCCTCCGTCATCCACTCGCCTCGTATCCAAAGCGG GAAGCACCATCAGGTAGACTAGCTGCGACAATCGCAAAGGACCCTGCCGC CAAGGGAACAGATCGCCCCCAGGTTCTAGACGAACCAGCGACTCAGTCTA CCGGCACACAAACGAGTGACTCCGCCATGATGCCCGATGATGGATCTTCG CGAAACAGCCAATCTCTAGGGAAGACAGAGGAGACGACCAGCTCCCCCTC CACAGGCAATCCCGAAATCGAATCTGATATGCCGGTGAGCATCTACTACA TCCTTGGGTATGCGGCACTCTCGGTTCTCCTTGCACTCTGTGGCCTTGTT GCTTCGGACAGTCGCGCATTTTTGAAAGTCGGTAGCCGTGTGTTTGCTAC CCCGCGGAAGCGTTCGTCACTCTCTTGTGAAGCACGACGTTTGAACACGA TTCCTGGACGCCCTCATGGAGTTGCAAATGGAGCGCTAGGAGATTTGCCC GGAAACCCTCGAGGAGGCGCAGGTCGGTCTGACCACCTTTGCCCAGAATG TCATGGTGCGATCGTTGAACGTGGAGAGGGGGGTGCTGAGACAAGATACG ATGATCACGTTCACCTGATACTCCCAACAAGCACGTTGAAATGAGTGGTT TCAACGCCGTTCCCGCCTTCGTCGCTGCTCCGTCGTCTACCCGCCTCTTT GTCGTTCAGGATACCTCATCACAAGGCGCACGAGCTACATTCGAAGAAGG GGCCGCCACACAGGACGCAAATCTCCCTGAACCAGCGACTTGGCCTGACG GCACACAAACGAGAGGCTCCACCACTACCTCCAACGGTGTTCCTCCTCAA ACGGAGGGGCCGCTGCGGAACACGAGGGAGCTGGACGAGTCCGGTCCCGC TGAATTGGACTTGTCGGGAATCATTTCATTTGTTGCTGTGCAACTCTCGG CTGCCGTTGCCTTTTGTGGGTGTGTTCTGTGGGGAGTAGGAAGTCTGTAA AGAAAGGTTGATTGCCGCCTTGTGG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7193:4371..7395-

>mRNA_Ecto-sp13_S_contig7193.18308.1 ID=mRNA_Ecto-sp13_S_contig7193.18308.1|Name=mRNA_Ecto-sp13_S_contig7193.18308.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=579bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7193:4371..7395- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGAGGTGCTGATGGACGAACGCAAGACTTGGACGGAAACCTCCGAAGA
GGCGCAGGTTCTAGACGAACCAGCGACTCAGTCTACCGGCACACAAACGA
GTGACTCCGCCATGATGCCCGATGATGGATCTTCGCGAAACAGCCAATCT
CTAGGGAAGACAGAGGAGACGACCAGCTCCCCCTCCACAGGCAATCCCGA
AATCGAATCTGATATGCCGGTGAGCATCTACTACATCCTTGGGTATGCGG
CACTCTCGGTTCTCCTTGCACTCTGTGGCCTTGTTGCTTCGGACAGTCGC
GCATTTTTGAAAGTCGGTAGCCGTGTGTTTGCTACCCCGCGGAAGCGTTC
GTCACTCTCTTGTGAAGCACGACGTTTGAACACGATTCCTGGACGCCCTC
ATGGAGTTGCAAATGGAGCGCTAGGAGATTTGCCCGGAAACCCTCGAGGA
GGCGCAGGTCGGTCTGACCACCTTTGCCCAGAATGTCATGGTGCGATCGT
TGAACGTGGAGAGGGGGGTGCTGAGACAAGATACGATGATCACGTTCACC
TGATACTCCCAACAAGCACGTTGAAATGA
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