prot_Ecto-sp13_S_contig6843.17803.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6843.17803.1
Unique Nameprot_Ecto-sp13_S_contig6843.17803.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length141
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6843.17803.1 vs. uniprot
Match: D7FZG4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZG4_ECTSI)

HSP 1 Score: 172 bits (437), Expect = 2.670e-48
Identity = 85/88 (96.59%), Postives = 86/88 (97.73%), Query Frame = 0 
Query:    5 VLSRRASGSIFADRVGITRIPDRAWTIALDYLELGEGMRCRQLGRVFRDTVEASLSVLALSGVNTITWATPDNLAFLTRFKNVRTLHW 92
            V+SRRASG IFADRVGITRIPDRAWTIALDYLELGEGMRCRQLGR FRDTVEASLSVLALSGVNTITWATPDNLAFLTRFKNVRTLHW
Sbjct:  115 VMSRRASGLIFADRVGITRIPDRAWTIALDYLELGEGMRCRQLGRAFRDTVEASLSVLALSGVNTITWATPDNLAFLTRFKNVRTLHW 202
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BLAST of mRNA_Ecto-sp13_S_contig6843.17803.1 vs. uniprot
Match: A0A6H5L111_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L111_9PHAE)

HSP 1 Score: 75.5 bits (184), Expect = 6.490e-14
Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 0 
Query:    4 GVLSRRASGSIFADRVGITRIPDRAWTIALDYLELGE 40
            GVLSRRASGSIFADRVGITRIPDRAWTIALDYLELGE
Sbjct:  182 GVLSRRASGSIFADRVGITRIPDRAWTIALDYLELGE 218
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6843.17803.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FZG4_ECTSI2.670e-4896.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L111_9PHAE6.490e-14100.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6843contigEcto-sp13_S_contig6843:4604..6450 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6843.17803.1mRNA_Ecto-sp13_S_contig6843.17803.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6843 4604..6451 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6843.17803.1 ID=prot_Ecto-sp13_S_contig6843.17803.1|Name=mRNA_Ecto-sp13_S_contig6843.17803.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=141bp
GGGGVLSRRASGSIFADRVGITRIPDRAWTIALDYLELGEGMRCRQLGRV
FRDTVEASLSVLALSGVNTITWATPDNLAFLTRFKNVRTLHWYVGVGMPS
KAESAARAAAAAGVEPAPAGGGVNVVAASEAAGAAAAAAAA
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