prot_Ecto-sp13_S_contig6704.17596.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6704.17596.1
Unique Nameprot_Ecto-sp13_S_contig6704.17596.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length511
Homology
BLAST of mRNA_Ecto-sp13_S_contig6704.17596.1 vs. uniprot
Match: D8LN47_ECTSI (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN47_ECTSI)

HSP 1 Score: 716 bits (1847), Expect = 1.530e-250
Identity = 409/505 (80.99%), Postives = 426/505 (84.36%), Query Frame = 0
Query:    1 MSSKIVPTTTVTT-GDSDDLTRERRSSRSLERLLSSVEGSTGLPSRPQSPLASWRASEVLSEPDSADGNASETGLEVGLPTTSGAG--VSLSCLASTATPLGRYQREADHSTRGGSIGDGHRVGSSLPNVVARGSGRDQLSLPPVGAAGYSALKPSATVSAPGPSSSXXXXXXXXXXXXGGKDKFVDTKADAVASAKLSQAALLQVSGAIGRGQAYEVADAKEEGEAGPEGRDKQTHLKLQTVGMLPGLTRPHVASYAEEHDQDISAEINSLSTIAAHEDVEEVTRFLLQHESTAKLAWDIVMMILIIFSSFVNPLKIGFDIPSRGALLVIEVLVDFAFIFYIGLTFRTTVMDPETKETITDVREISARQGQKMMGWFVLDVASSLPVALIAHTMDVTGQEIFFYMLKLLRTLKLHQLSVISTAVLQLFEDRDFNPSMFRIYIFVFTFVLVVHFIACGYWFVSRTMDPEFEGLWVPEQEYLDAALYEKYARALYFSLVITYGNDL 502
            MSSK+VPTT  TT G+S DLT+ER SSRSLERLLSSVEGST LPS PQSPLASWRASEVLSEPD+ADGNASETGL             VSLS LASTATP  RYQREA HSTRG SIGDGHR+GSSLP VVARGSGR QLS PPV AAG SA+K S  VSAPGPSSS            GGK       ADAVASA LSQAALL+ SGAIGRG+  EVADAK       EGRDK+THL+LQTV MLP L RPHVASYAEEH+QDISAEINSLSTI+AHEDVEE TRFLLQHEST KL WDIVMMILIIFSSFVNPLKIGFDI SRGALLVIEVLVDF+FIF+IGLTFRTTVMD ETKETITDVREISAR+  K  GWFVLDVASSLPVALIAHT+DVTGQE FFYMLKLLRTLKLHQLSVISTAVLQ FEDRDFNPSMFRIYIFVFTFVLVVHFIACGYWFVSRT DPEFEGLWVPEQEYLDAALY+KY RALYFSLVITYGNDL
Sbjct:    1 MSSKVVPTTITTTPGESGDLTKERMSSRSLERLLSSVEGSTVLPSLPQSPLASWRASEVLSEPDAADGNASETGLXXXXXXXXXXXXXVSLSSLASTATPQERYQREAGHSTRGISIGDGHRMGSSLPKVVARGSGRHQLSSPPVSAAGNSAVKLSTLVSAPGPSSSEQAAATGVVTSSGGK-------ADAVASAMLSQAALLKASGAIGRGKECEVADAK------GEGRDKRTHLQLQTVAMLPILARPHVASYAEEHNQDISAEINSLSTISAHEDVEEGTRFLLQHESTGKLTWDIVMMILIIFSSFVNPLKIGFDITSRGALLVIEVLVDFSFIFHIGLTFRTTVMDTETKETITDVREISARRYLK--GWFVLDVASSLPVALIAHTVDVTGQENFFYMLKLLRTLKLHQLSVISTAVLQRFEDRDFNPSMFRIYIFVFTFVLVVHFIACGYWFVSRTTDPEFEGLWVPEQEYLDAALYKKYTRALYFSLVITYGNDL 490          
BLAST of mRNA_Ecto-sp13_S_contig6704.17596.1 vs. uniprot
Match: A0A6H5JQN9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQN9_9PHAE)

HSP 1 Score: 615 bits (1587), Expect = 3.690e-217
Identity = 342/423 (80.85%), Postives = 362/423 (85.58%), Query Frame = 0
Query:    1 MSSKIVPTTTVTTGDSDDLTRERRSSRSLERLLSSVEGSTGLPSRPQSPLASWRASEVLSEPDSADGNASETGLEVGLPTTSGAGVSLSCLASTATPLGRYQREADHSTRGGSIGDGHRVGSSLPNVVARGSGRDQLSLPPVGAAGYSALKPSATVSAPGPSSSXXXXXXXXXXXXGGKDKFVDTKADAVASAKLSQAALLQVSGAIGRGQAYEVADAKEEGEAGPEGRDKQTHLKLQTVGMLPGLTRPHVASYAEEHDQDISAEINSLSTIAAHEDVEEVTRFLLQHESTAKLAWDIVMMILIIFSSFVNPLKIGFDIPSRGALLVIEVLVDFAFIFYIGLTFRTTVMDPETKETITDVREISARQGQK-----------------MMGWFVLDVASSLPVALIAHTMDVTGQEIFFYMLKL 406
            MSSKIVPTT + TGDSDDLTRERRSSRSLERLLSS+EGSTGLPSRPQSPLASWRASE LSE D+ADGNASETGL +G+PT SGAGVSLS LASTATPL RYQREADHSTRGGSIGDGHR+GS LP VVARG GRDQ SLPPVGAAG SALKP+  VS+PGPSS             GGK+KFVD KADAVASA LS+   LQVSGAIGRG+AYE+ADA+ EG  GPEGRDKQ HLKLQTV MLPGLT+PHVASYAEEH QDISAEINSLSTI+AHEDV EVTRFLLQHESTAKLAWDIVMMILIIFSSFVNPLKIGFDI SRGALLVIEVLVDFAFIF+IG+TFRTTVMD ETKETITDVREISARQG+K                 + GWFVLDVASSLPVALIAHT+DVTGQE FFYMLKL
Sbjct:    1 MSSKIVPTTVIPTGDSDDLTRERRSSRSLERLLSSMEGSTGLPSRPQSPLASWRASEFLSELDTADGNASETGLGLGMPTASGAGVSLSSLASTATPLERYQREADHSTRGGSIGDGHRMGSPLPEVVARGWGRDQHSLPPVGAAGNSALKPTTIVSSPGPSS-LEQAAAAVVPSPGGKEKFVDAKADAVASAMLSKGVSLQVSGAIGRGKAYEMADARGEGRGGPEGRDKQAHLKLQTVAMLPGLTKPHVASYAEEHGQDISAEINSLSTISAHEDVGEVTRFLLQHESTAKLAWDIVMMILIIFSSFVNPLKIGFDIASRGALLVIEVLVDFAFIFHIGITFRTTVMDTETKETITDVREISARQGRKNDGLPCLVCVWARISAELRGWFVLDVASSLPVALIAHTVDVTGQETFFYMLKL 422          
BLAST of mRNA_Ecto-sp13_S_contig6704.17596.1 vs. uniprot
Match: A0A6H5JMZ2_9PHAE (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMZ2_9PHAE)

HSP 1 Score: 132 bits (333), Expect = 3.490e-30
Identity = 62/68 (91.18%), Postives = 65/68 (95.59%), Query Frame = 0
Query:  435 MFRIYIFVFTFVLVVHFIACGYWFVSRTMDPEFEGLWVPEQEYLDAALYEKYARALYFSLVITYGNDL 502
            MFRIY+FVFTFVLVVHFIACGYWFVSRT DPEFEG+WVPEQEYLDA L+EKY RALYFSLVITYGNDL
Sbjct:    1 MFRIYMFVFTFVLVVHFIACGYWFVSRTTDPEFEGVWVPEQEYLDAGLFEKYTRALYFSLVITYGNDL 68          
BLAST of mRNA_Ecto-sp13_S_contig6704.17596.1 vs. uniprot
Match: A0A7S4DBZ5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DBZ5_HETAK)

HSP 1 Score: 101 bits (252), Expect = 4.540e-19
Identity = 66/212 (31.13%), Postives = 112/212 (52.83%), Query Frame = 0
Query:  296 WDIVMMILIIFSSFVNPLKIGFDIPSRGALLVIEVLVDFAFIFYIGLTFRTTVMDPETKETITDVREISARQGQKMMGWFVLDVASSLPVALIAHTMDVTGQEIFFYMLKLLRTLKLHQLSVISTAVLQLFEDRDFNPSMFRIYIFVFTFVLVVHFIACGYWFVSRTM---DPEFEGLWVPEQEYLDAALYEKYARALYFSLVITYGNDLSE 504
            W  +++   ++   V P+ I F+I S GAL  + +++D  FI  I + F TT  DP TKE + D++ IS      + G+F  D+  S+P   +      TG ++ F  +KLLRT+K+ +L + +   L   E +   P++FR+     +F +++HF+AC +WF+S       P FE +       L+ AL   YAR+ +FS+ +   N + E
Sbjct:   44 WSFLLIACTLYMLAVVPMDIAFEIGSIGALATLTLVMDMVFIADIIVNFLTTYRDPNTKEEVADLKRISRNY---LQGYFTADMLGSIPDIALTQIAVATGAKLTF--IKLLRTMKIFRL-LSANETLTAIEKKLRLPAIFRVVKISVSFFIIIHFMACTFWFISCDSYFDTPSFENVCTAAP--LEGAL-TPYARSFHFSMAVLTANPIGE 246          
BLAST of mRNA_Ecto-sp13_S_contig6704.17596.1 vs. uniprot
Match: UPI000B8CB237 (potassium channel KAT3 n=1 Tax=Carica papaya TaxID=3649 RepID=UPI000B8CB237)

HSP 1 Score: 80.1 bits (196), Expect = 2.800e-12
Identity = 53/201 (26.37%), Postives = 107/201 (53.23%), Query Frame = 0
Query:  296 WDIVMMILIIFSSFVNPLKIGFDIPSRGALLVIEVLVDFAFIFYIGLTFRTTVMDPETKETITDVREISARQGQKMMGWFVLDVASSLPVALIAHTMDVTGQEIFFYMLKLLRTLKLHQLSVISTAVLQLFEDRDFNPSMFRIYIFVFTFVLVVHFIACGYWFVS-RTMDPEFEGLWVPEQEYLDAALYEKYARALYFSLV 495
            W+  +++L+++S++  P ++ F+  + GAL+ I+++VDF F   I LTF    +D  T   + D ++I+ R  +++     +DVAS+LP   I     +TG+      L  L  L+L +L  +S    +L +D  F+  + R++  +   +  +H  AC Y++++     PE   + V   ++ D  ++  Y  ++Y+S+V
Sbjct:   62 WETFLVVLVVYSAWATPFELAFNRAATGALMYIDLVVDFFFAIDIVLTFFVGYLDKSTYVLVDDHKKIAIRYVKRLH--LPMDVASTLPFQFIYRI--ITGKNHQAQFLGFLNLLRLWRLRRVSALFKRLEKDTQFSYFITRLFKLLCVTIFTIHSAACIYFYLAAHYKTPEDTWIGVQVNDFKDRTIWLGYTYSMYWSIV 258          
BLAST of mRNA_Ecto-sp13_S_contig6704.17596.1 vs. uniprot
Match: A0A251S905_HELAN (Potassium channel n=2 Tax=Helianthus annuus TaxID=4232 RepID=A0A251S905_HELAN)

HSP 1 Score: 80.1 bits (196), Expect = 3.750e-12
Identity = 56/202 (27.72%), Postives = 102/202 (50.50%), Query Frame = 0
Query:  295 AWDIVMMILIIFSSFVNPLKIGFDIPSRGALLVIEVLVDFAFIFYIGLTFRTTVMDPETKETITDVREISARQGQKMMGWFVLDVASSLPVALIAHTMDVTGQEIFFYMLKLLRTLKLHQLSVISTAVLQLFEDRDFNPSMFRIYIFVFTFVLVVHFIAC-GYWFVSRTMDPEFEGLWVPEQEYLDAALYEKYARALYFSLV 495
            AW++ +++L+I+S++++P  + F     GAL + + +V+  F   I LTF    +D +T   + D ++I+ R    +  WF+LDV+S++P   I         EI F   K+L  L+L +L  +S+   +L +D  FN    R    V+  +  VH   C  Y    R  DP    +      +   +++++Y  +LY+S+V
Sbjct:   59 AWEMFLVVLVIYSAWISPFDLAFLDKKEGALRIFDNIVNGFFAIDIVLTFFVAYLDSQTYALVDDHKKIAVRY---LSTWFILDVSSTVPFRSIILLCTHRKSEIGF---KILGMLRLWRLRRVSSLFARLEKDIRFNYFWIRCTKLVWVTLFAVHCAGCFNYLIADRYPDPNKTWIGAVYPNFKSESIWDRYVTSLYWSIV 254          
BLAST of mRNA_Ecto-sp13_S_contig6704.17596.1 vs. uniprot
Match: A0A804IMN3_MUSAM (Potassium channel n=1 Tax=Musa acuminata subsp. malaccensis TaxID=214687 RepID=A0A804IMN3_MUSAM)

HSP 1 Score: 77.4 bits (189), Expect = 2.180e-11
Identity = 61/227 (26.87%), Postives = 115/227 (50.66%), Query Frame = 0
Query:  280 EVTRFLLQHESTAKLAWDIVMMILIIFSSFVNPLKIGFDIPSRGALLVIEVLVDFAFIFYIGLTFRTTVMDPETKETITDVREISARQGQKMMGWFVLDVASSLPVALIAHTMD-VTGQEIFFYMLKLLRTLKLHQLSVISTAVLQLFEDRDFNPSMFRIYIFVFTFVLVVHFIACGYWFVS-RTMDPEFEGLWVPEQEYLDAALYEKYARALYFSLV----ITYGN 500
            ++ RF++   +    AW+  +++L++++++ +P + GF   SRGAL +++ +VD  F   I LTF    +D  +   I   ++I+ R    +  WFVLD+AS++P+ ++   +    G   FF ML+L R      L  +S+   +L +DR FN    R        +  VH   C ++ V+ R  DP    +     ++   +L+ +Y  +LY+S+     + YG+
Sbjct:   53 KLRRFIVSPYARRYKAWETFLIVLVVYTAWASPFEFGFLERSRGALALVDNVVDALFAVDIVLTFFVAYVDKTSYLLIDSRKKIAWRY---LSTWFVLDLASTVPLEIVRRILPRKLGSYGFFTMLRLWR------LRRVSSLFARLEKDRKFNYFWVRCAKLTCVTLFAVHSAGCFFYLVAARYHDPSRTWIGASIPDFHVRSLWVRYVTSLYWSITTLSTVGYGD 270          
BLAST of mRNA_Ecto-sp13_S_contig6704.17596.1 vs. uniprot
Match: A0A6I9RLW8_ELAGV (Potassium channel n=3 Tax=Arecaceae TaxID=4710 RepID=A0A6I9RLW8_ELAGV)

HSP 1 Score: 77.4 bits (189), Expect = 3.080e-11
Identity = 59/226 (26.11%), Postives = 114/226 (50.44%), Query Frame = 0
Query:  280 EVTRFLLQHESTAKLAWDIVMMILIIFSSFVNPLKIGFDIPSRGALLVIEVLVDFAFIFYIGLTFRTTVMDPETKETITDVREISARQGQKMMGWFVLDVASSLPVALIAHTMDVTGQEIFFYMLKLLRTLKLHQLSVISTAVLQLFEDRDFNPSMFRIYIFVFTFVLVVHFIACGYWFVS-RTMDPEFEGLWVPEQEYLDAALYEKYARALYFSLV----ITYGN 500
            ++ RF++        +W+  ++IL+I+S++V+P + GF    +GAL V++ +V+  F   I LTF    +D  T   I D ++I+ +    +  WFVLDV S++P  L    +    +   F+       L+L +L  +S    +L +DR+FN    R    +   +  VH   C Y+ ++ R  +P    + V   ++ + +L+ +Y  ++Y+S+     + YG+
Sbjct:   51 KLRRFIVSPYERRYRSWETFLIILVIYSAWVSPFEFGFLEKEKGALPVMDNIVNGFFAVDIILTFFVAFIDRVTYLLIDDPKQIAWKY---ITSWFVLDVVSTIPTELARKILPPKLRSYGFF-----NMLRLWRLRRVSALFARLEKDRNFNYFWVRCVKLICVTLFAVHCAGCFYYLLAARNHNPSKTWIGVYMPDFHERSLWIRYVTSMYWSITTLTTVGYGD 268          
BLAST of mRNA_Ecto-sp13_S_contig6704.17596.1 vs. uniprot
Match: A0A8J5FI41_ZINOF (Potassium channel n=5 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5FI41_ZINOF)

HSP 1 Score: 77.0 bits (188), Expect = 3.160e-11
Identity = 57/216 (26.39%), Postives = 104/216 (48.15%), Query Frame = 0
Query:  280 EVTRFLLQHESTAKLAWDIVMMILIIFSSFVNPLKIGFDIPSRGALLVIEVLVDFAFIFYIGLTFRTTVMDPETKETITDVREISARQGQKMMGWFVLDVASSLPVALIAHTMDVTGQEIFFYMLKLLRTLKLHQLSVISTAVLQLFEDRDFNPSMFRIYIFVFTFVLVVHFIAC-GYWFVSRTMDPEFEGLWVPEQEYLDAALYEKYARALYFSL 494
            ++ RF++        AW + +++L+I+S+++ P ++ F       LL IE +++  F   I LTF    +D ++   I D + I+ R  + +  WFV DV S+ P   I+      G ++ F   K+L  L+L +L  +S+   +L +D  FN  + R    V   +  VH   C  Y    R  DP    +      +  ++L+ +Y  A+Y+S+
Sbjct:   45 KLRRFMISPFDPRYRAWQMFLILLVIYSAWICPFELAFLRYLPAKLLWIENILNSFFAIDIVLTFFVACLDRKSYVLIDDPKRIAVRSYRYLSSWFVFDVLSTAPFEAISLLFRGNGNDLGF---KILNMLRLWRLRRVSSLFSRLEKDIRFNYFLTRCTKLVLVTLFAVHCAGCFNYLIADRYPDPRRTWIGATMPNFRSSSLWVRYVTAIYWSI 257          
BLAST of mRNA_Ecto-sp13_S_contig6704.17596.1 vs. uniprot
Match: UPI000C1D7F4C (potassium channel KAT3-like n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1D7F4C)

HSP 1 Score: 76.6 bits (187), Expect = 4.990e-11
Identity = 63/262 (24.05%), Postives = 120/262 (45.80%), Query Frame = 0
Query:  235 LKLQTVGMLPGLTRPHVASYAEEHDQDISAEINSLSTIAAHEDVEEVTRFLLQHESTAKLAWDIVMMILIIFSSFVNPLKIGFDIPSRGALLVIEVLVDFAFIFYIGLTFRTTVMDPETKETITDVREISARQGQKMMGWFVLDVASSLPVALIAHTMDVTGQEIFFYMLKLLRTLKLHQLSVISTAVLQLFEDRDFNPSMFRIYIFVFTFVLVVHFIAC-GYWFVSRTMDPEFEGLWVPEQEYLDAALYEKYARALYFSLV 495
            L+   V   P  T+ +   ++ +    + A IN  + +  H         ++   S    AW++ +++L+I+S++++P +  F    + AL V + +V+  F   I LTF    +D +T   + D R+I+ R    +  WF+ D+ S++P   I+         + F   KLL  L+L +L  +S+   +L +D  FN    R    +   +  VH   C  Y    R  DP+   +      +   +L+++Y  A+Y+S+V
Sbjct:   10 LRRFCVEEFPTNTQTYSGFFSNDLLPSLGARINQATILRRH---------IVSPFSPHYRAWEMFLVLLVIYSAWISPFEFAFLTYKQDALFVFDNIVNSFFAMDILLTFFVAYLDSQTYLLVDDPRKIAIRY---LSTWFIFDICSTIPFRAISLLFKKHSGGLGF---KLLSMLRLWRLRRVSSLFARLEKDIRFNYFWTRCTKLISVTLFTVHCAGCFNYIIADRYPDPKSTWIGAMYPNFKKISLWDRYVTAIYWSIV 256          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6704.17596.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LN47_ECTSI1.530e-25080.99Cyclic nucleotide-binding domain-containing protei... [more]
A0A6H5JQN9_9PHAE3.690e-21780.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JMZ2_9PHAE3.490e-3091.18Cyclic nucleotide-binding domain-containing protei... [more]
A0A7S4DBZ5_HETAK4.540e-1931.13Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
UPI000B8CB2372.800e-1226.37potassium channel KAT3 n=1 Tax=Carica papaya TaxID... [more]
A0A251S905_HELAN3.750e-1227.72Potassium channel n=2 Tax=Helianthus annuus TaxID=... [more]
A0A804IMN3_MUSAM2.180e-1126.87Potassium channel n=1 Tax=Musa acuminata subsp. ma... [more]
A0A6I9RLW8_ELAGV3.080e-1126.11Potassium channel n=3 Tax=Arecaceae TaxID=4710 Rep... [more]
A0A8J5FI41_ZINOF3.160e-1126.39Potassium channel n=5 Tax=Zingiber officinale TaxI... [more]
UPI000C1D7F4C4.990e-1124.05potassium channel KAT3-like n=1 Tax=Olea europaea ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR10217VOLTAGE AND LIGAND GATED POTASSIUM CHANNELcoord: 283..497
NoneNo IPR availablePANTHERPTHR10217:SF435POTASSIUM VOLTAGE-GATED CHANNEL PROTEIN EAGcoord: 283..497
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 323..342
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 312..322
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 427..437
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 438..459
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 410..426
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 343..370
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 294..311
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 390..409
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 460..510
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..293
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 371..389
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 293..496
NoneNo IPR availableTMHMMTMhelixcoord: 325..344
NoneNo IPR availableTMHMMTMhelixcoord: 438..460
NoneNo IPR availableTMHMMTMhelixcoord: 294..313

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6704contigEcto-sp13_S_contig6704:2193..7505 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6704.17596.1mRNA_Ecto-sp13_S_contig6704.17596.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6704 1462..7505 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6704.17596.1 ID=prot_Ecto-sp13_S_contig6704.17596.1|Name=mRNA_Ecto-sp13_S_contig6704.17596.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=511bp
MSSKIVPTTTVTTGDSDDLTRERRSSRSLERLLSSVEGSTGLPSRPQSPL
ASWRASEVLSEPDSADGNASETGLEVGLPTTSGAGVSLSCLASTATPLGR
YQREADHSTRGGSIGDGHRVGSSLPNVVARGSGRDQLSLPPVGAAGYSAL
KPSATVSAPGPSSSEQAAAAVEEPPPGGKDKFVDTKADAVASAKLSQAAL
LQVSGAIGRGQAYEVADAKEEGEAGPEGRDKQTHLKLQTVGMLPGLTRPH
VASYAEEHDQDISAEINSLSTIAAHEDVEEVTRFLLQHESTAKLAWDIVM
MILIIFSSFVNPLKIGFDIPSRGALLVIEVLVDFAFIFYIGLTFRTTVMD
PETKETITDVREISARQGQKMMGWFVLDVASSLPVALIAHTMDVTGQEIF
FYMLKLLRTLKLHQLSVISTAVLQLFEDRDFNPSMFRIYIFVFTFVLVVH
FIACGYWFVSRTMDPEFEGLWVPEQEYLDAALYEKYARALYFSLVITYGN
DLSEGQILAR*
back to top