prot_Ecto-sp13_S_contig6664.17535.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6664.17535.1 vs. uniprot
Match: A0A6H5JYA8_9PHAE (Sm domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JYA8_9PHAE) HSP 1 Score: 171 bits (433), Expect = 3.520e-52 Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0
Query: 65 PAQTGGGKRSPSDFLKTVLGRPVVVKLNSGIDYRGVLVCLDGYMNIAMEQTEEYVNGQLKATFGDCFIRGNNVLYISTQRRR 146
PAQTGGGKRSPSDFLKTVLGRPVVVKLNSGIDYRGVLVCLDGYMNIAMEQTEEYVNGQLKATFGDCFIRGNNVLYISTQRRR
Sbjct: 64 PAQTGGGKRSPSDFLKTVLGRPVVVKLNSGIDYRGVLVCLDGYMNIAMEQTEEYVNGQLKATFGDCFIRGNNVLYISTQRRR 145
BLAST of mRNA_Ecto-sp13_S_contig6664.17535.1 vs. uniprot
Match: A0A7S2UQ42_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UQ42_9STRA) HSP 1 Score: 141 bits (355), Expect = 6.710e-41 Identity = 66/75 (88.00%), Postives = 71/75 (94.67%), Query Frame = 0
Query: 72 KRSPSDFLKTVLGRPVVVKLNSGIDYRGVLVCLDGYMNIAMEQTEEYVNGQLKATFGDCFIRGNNVLYISTQRRR 146
KRSPSDFLK+VLGRPV V+LNSG DYRGVL CLDGYMNIAMEQTEEYV+GQLKA +GDCFIRGNNVLYISTQ+RR
Sbjct: 28 KRSPSDFLKSVLGRPVSVRLNSGTDYRGVLACLDGYMNIAMEQTEEYVDGQLKAKYGDCFIRGNNVLYISTQKRR 102
BLAST of mRNA_Ecto-sp13_S_contig6664.17535.1 vs. uniprot
Match: A0A7S2ATC3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2ATC3_9STRA) HSP 1 Score: 140 bits (354), Expect = 1.140e-40 Identity = 67/75 (89.33%), Postives = 68/75 (90.67%), Query Frame = 0
Query: 72 KRSPSDFLKTVLGRPVVVKLNSGIDYRGVLVCLDGYMNIAMEQTEEYVNGQLKATFGDCFIRGNNVLYISTQRRR 146
K PSDFLKTVLGRPVVVKLNSG DYRGVL CLDGYMNIAMEQTEEYVNGQLKA +GDCFIRGNNVLYIS RRR
Sbjct: 33 KCQPSDFLKTVLGRPVVVKLNSGTDYRGVLACLDGYMNIAMEQTEEYVNGQLKAKYGDCFIRGNNVLYISASRRR 107
BLAST of mRNA_Ecto-sp13_S_contig6664.17535.1 vs. uniprot
Match: A0A7S2IZG2_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2IZG2_9EUKA) HSP 1 Score: 140 bits (353), Expect = 1.480e-40 Identity = 66/75 (88.00%), Postives = 71/75 (94.67%), Query Frame = 0
Query: 72 KRSPSDFLKTVLGRPVVVKLNSGIDYRGVLVCLDGYMNIAMEQTEEYVNGQLKATFGDCFIRGNNVLYISTQRRR 146
K +PSDFLKTVLGRPVVVKLNSG+DYRGVL CLDGYMNIAMEQTEEYV+GQLKA +GD FIRGNNVLYISTQ+RR
Sbjct: 30 KSNPSDFLKTVLGRPVVVKLNSGVDYRGVLACLDGYMNIAMEQTEEYVDGQLKAKYGDTFIRGNNVLYISTQKRR 104
BLAST of mRNA_Ecto-sp13_S_contig6664.17535.1 vs. uniprot
Match: A0A448Z717_9STRA (Sm domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z717_9STRA) HSP 1 Score: 139 bits (350), Expect = 4.110e-40 Identity = 65/81 (80.25%), Postives = 76/81 (93.83%), Query Frame = 0
Query: 67 QTGGGKRSPSDFLKTVLGRPVVVKLNSGIDYRGVLVCLDGYMNIAMEQTEEY-VNGQLKATFGDCFIRGNNVLYISTQRRR 146
QTGG KRSPSDFLK+VLGRP +VKLNSGI+YRGVL CLDGY+NIAMEQT+EY ++GQLKAT+GDCFIRGNNVL+IS+Q +R
Sbjct: 20 QTGGKKRSPSDFLKSVLGRPAIVKLNSGIEYRGVLACLDGYLNIAMEQTQEYGLDGQLKATYGDCFIRGNNVLHISSQAKR 100
BLAST of mRNA_Ecto-sp13_S_contig6664.17535.1 vs. uniprot
Match: A0A0L8G189_OCTBM (Sm domain-containing protein n=2 Tax=Octopus TaxID=6643 RepID=A0A0L8G189_OCTBM) HSP 1 Score: 138 bits (347), Expect = 5.740e-40 Identity = 63/77 (81.82%), Postives = 71/77 (92.21%), Query Frame = 0
Query: 70 GGKRSPSDFLKTVLGRPVVVKLNSGIDYRGVLVCLDGYMNIAMEQTEEYVNGQLKATFGDCFIRGNNVLYISTQRRR 146
G K++PSDFLK ++GRPVVVKLNSG+DYRGVL CLDGYMNIA+EQTEEYVNGQLK +GD FIRGNNVLYISTQ+RR
Sbjct: 3 GRKQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEYVNGQLKNRYGDAFIRGNNVLYISTQKRR 79
BLAST of mRNA_Ecto-sp13_S_contig6664.17535.1 vs. uniprot
Match: A0A836CMP0_9STRA (Sm domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMP0_9STRA) HSP 1 Score: 138 bits (348), Expect = 1.230e-39 Identity = 65/81 (80.25%), Postives = 71/81 (87.65%), Query Frame = 0
Query: 66 AQTGGGKRSPSDFLKTVLGRPVVVKLNSGIDYRGVLVCLDGYMNIAMEQTEEYVNGQLKATFGDCFIRGNNVLYISTQRRR 146
A+ +SPSDFLK VLGR V+VKLNSG+DYRGVL CLDGYMNIAMEQTEEYVNGQLKA +GDCFIRGNNVLYIST +RR
Sbjct: 37 AKAASKVKSPSDFLKGVLGRSVIVKLNSGVDYRGVLACLDGYMNIAMEQTEEYVNGQLKAKYGDCFIRGNNVLYISTTKRR 117
BLAST of mRNA_Ecto-sp13_S_contig6664.17535.1 vs. uniprot
Match: V4A3S6_LOTGI (Sm domain-containing protein n=19 Tax=Protostomia TaxID=33317 RepID=V4A3S6_LOTGI) HSP 1 Score: 136 bits (343), Expect = 2.260e-39 Identity = 62/75 (82.67%), Postives = 70/75 (93.33%), Query Frame = 0
Query: 72 KRSPSDFLKTVLGRPVVVKLNSGIDYRGVLVCLDGYMNIAMEQTEEYVNGQLKATFGDCFIRGNNVLYISTQRRR 146
K++PSDFLK ++GRPVVVKLNSG+DYRGVL CLDGYMNIA+EQTEEYVNGQLK +GD FIRGNNVLYISTQ+RR
Sbjct: 4 KQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEYVNGQLKNKYGDAFIRGNNVLYISTQKRR 78
BLAST of mRNA_Ecto-sp13_S_contig6664.17535.1 vs. uniprot
Match: LSM6_HUMAN (U6 snRNA-associated Sm-like protein LSm6 n=406 Tax=Sarcopterygii TaxID=8287 RepID=LSM6_HUMAN) HSP 1 Score: 136 bits (343), Expect = 2.330e-39 Identity = 62/75 (82.67%), Postives = 70/75 (93.33%), Query Frame = 0
Query: 72 KRSPSDFLKTVLGRPVVVKLNSGIDYRGVLVCLDGYMNIAMEQTEEYVNGQLKATFGDCFIRGNNVLYISTQRRR 146
K++PSDFLK ++GRPVVVKLNSG+DYRGVL CLDGYMNIA+EQTEEYVNGQLK +GD FIRGNNVLYISTQ+RR
Sbjct: 5 KQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEYVNGQLKNKYGDAFIRGNNVLYISTQKRR 79
BLAST of mRNA_Ecto-sp13_S_contig6664.17535.1 vs. uniprot
Match: K4FT18_CALMI (U6 snRNA-associated Sm-like protein LSm6 n=12 Tax=Vertebrata TaxID=7742 RepID=K4FT18_CALMI) HSP 1 Score: 136 bits (343), Expect = 2.330e-39 Identity = 62/75 (82.67%), Postives = 70/75 (93.33%), Query Frame = 0
Query: 72 KRSPSDFLKTVLGRPVVVKLNSGIDYRGVLVCLDGYMNIAMEQTEEYVNGQLKATFGDCFIRGNNVLYISTQRRR 146
K++PSDFLK ++GRPVVVKLNSG+DYRGVL CLDGYMNIA+EQTEEYVNGQLK +GD FIRGNNVLYISTQ+RR
Sbjct: 5 KQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEYVNGQLKNKYGDAFIRGNNVLYISTQKRR 79 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6664.17535.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp13_S_contig6664.17535.1 ID=prot_Ecto-sp13_S_contig6664.17535.1|Name=mRNA_Ecto-sp13_S_contig6664.17535.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=147bpback to top |