prot_Ecto-sp13_S_contig661.17458.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig661.17458.1
Unique Nameprot_Ecto-sp13_S_contig661.17458.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length1004
Homology
BLAST of mRNA_Ecto-sp13_S_contig661.17458.1 vs. uniprot
Match: A0A6H5J6K8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6K8_9PHAE)

HSP 1 Score: 1106 bits (2860), Expect = 0.000e+0
Identity = 717/815 (87.98%), Postives = 742/815 (91.04%), Query Frame = 0
Query:  101 QVAAWCSESAGCDVADGSVLVRISSNEEPGLGYFVQVTDRNSSVSGRSSYFELLEAPSTSSSVVVPEYQDEAGGTGVGDMSLALLVVAGICGIAIIAALLAVCFITCRRRSAEKMKTAGEVHDLEQGGVLDRTTPGRSNDLNTSEGRGFSMGNPLKGRAASRSTDGGITSYGASPAGTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQVSATSRSPGEDGAYTPGRSGSFRTPRRTMSHGRDDLRGHQMYDYSVDEGYDGGRGRRSSRSPRAFVSRSRSAGRSRRPPRGDEFDRAERHMSVTPGRRRSNGISPDEGFSRSPHVFGMRRSKSEGRADDHSQDSARHKTAEEDVDASRWEHDGMMPSVGTIERGRRSQRMSLANSRRSKSMHDTSKSGRLDSKGQYDWEDNARSKSATPSRQTYRNGMPDIGQEFPSDVSWEELRSTHLRNKSKVRVRKASSLPPSYGDAMDGGVGRNGSPDDRPPPPSYGTRDANNFTSQLSIGIPDGPSPSSFQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLSPGTRAVSARKAARDAQLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMIADDSDQDQEVVMSPRSTSSAGGEVEGSSVREKIKVFSGRSESIGSADKMGRGSRALPRGRSPYAQGLARGWSQADEEEVKARAEQSSANAKEALALMGRSNSSIGKPDNSWVKNEVRGPDTAGGSTDEGGRAVGGNRNLSSAITAPVPAVPSDPEQLAMKRRAFVKQYSQSGTSDYAEDSDYSVFDNATAVTAGKSGT 915
            +VAAWCSES GCDVADGSVLVRIS+NEE GLGYF++VTDR  SVSGRSSYFELLE PS SSSVVVPEYQDEAGGTGVGDMSLALL+VAGICG+AIIAALLA CFI CRRRSAEK KTA E HDLE GGVLDRTTPGRSNDLNTSEGRGFSMGNPLKGR ASRSTD    SYGASPAGTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQVSATS SPG +GAYTP RSGS RTPRRTMS GR DLRG QMYD+SVDEGYDGGRGRRS RSPRA+VSRSRSAGRSRRPPRGDEFDR ER +SVTPGRRR +GISPD   SRSPHV GMRRSKSEGRADDHSQDSAR++T EEDVDASRWEHDGMMP+VGTIERGRRSQR+++ANS RSKSMHDTSK GRLDSK QYDWE NARSKSATPSRQTYRN  PD+ QEFPSDVSWEELRSTHLRNKSKVRVRK SSLPPSYGDAMDGG G NGSPDDRPPPPSYG RDAN+FTSQLSIGIPDGPSPSSFQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  GLSPGTRAVSARKAARDAQLS       XXXXXXXXXXXXXXXXXXXXX         +D+DQEVVMSPRSTSSAGGEVEGSSVREKIKVFSGRSES GS DKMGRGS ALPRGRSPYA+GLARGWSQADEEEVKARAEQSSANAKEALALMG SNSS GKPDNSWVKNEVRGPDTAGGST+EGGRAVGG+RNLS AITAPVPAVPSD EQLA+KRRAFVKQYSQSGTSDYAEDSDYSVFDN  A  AGKSGT
Sbjct:   46 EVAAWCSESVGCDVADGSVLVRISANEEAGLGYFIEVTDRILSVSGRSSYFELLEPPSNSSSVVVPEYQDEAGGTGVGDMSLALLIVAGICGVAIIAALLAGCFIMCRRRSAEKAKTADEAHDLELGGVLDRTTPGRSNDLNTSEGRGFSMGNPLKGRTASRSTDADKMSYGASPAGTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQVSATSGSPGAEGAYTPVRSGSSRTPRRTMSSGRHDLRGRQMYDHSVDEGYDGGRGRRSFRSPRAYVSRSRSAGRSRRPPRGDEFDRGERQLSVTPGRRRPSGISPDGRRSRSPHVLGMRRSKSEGRADDHSQDSARYETVEEDVDASRWEHDGMMPAVGTIERGRRSQRLAMANSWRSKSMHDTSKLGRLDSKSQYDWEANARSKSATPSRQTYRNEQPDVDQEFPSDVSWEELRSTHLRNKSKVRVRKTSSLPPSYGDAMDGGAGGNGSPDDRPPPPSYGPRDANSFTSQLSIGIPDGPSPSSFQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFGLSPGTRAVSARKAARDAQLSAERALAAXXXXXXXXXXXXXXXXXXXXX---------ADEDQEVVMSPRSTSSAGGEVEGSSVREKIKVFSGRSESTGSVDKMGRGSPALPRGRSPYARGLARGWSQADEEEVKARAEQSSANAKEALALMGHSNSSTGKPDNSWVKNEVRGPDTAGGSTNEGGRAVGGDRNLSPAITAPVPAVPSDLEQLAIKRRAFVKQYSQSGTSDYAEDSDYSVFDNTAAAAAGKSGT 851          
BLAST of mRNA_Ecto-sp13_S_contig661.17458.1 vs. uniprot
Match: D7FSX2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSX2_ECTSI)

HSP 1 Score: 583 bits (1504), Expect = 1.170e-196
Identity = 365/417 (87.53%), Postives = 382/417 (91.61%), Query Frame = 0
Query:  127 EEPGLGYFVQVTDRNSSVSGRSSYFELLEAPSTSSSVVVPEYQDEAGGTGVGDMSLALLVVAGICGIAIIAALLAVCFITCRRRSAEKMKTAGEVHDLEQGGVLDRTTPGRSNDLNTSEGRGFSMGNPLKGRAASRSTDGGITSYGASPAGTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQVSATSRSPGEDGAYTPGRSGSFRTPRRTMSHGRDDLRGHQMYDYSVDEGYDGGRGRRSSRSPRAFVSRSRSAGRSRRPPRGDEFDRAERHMSVTPGRRRSNGISPDEGFSRSPHVFGMRRSKSEGRADDHSQDSARHKTAEEDVDASRWEHDGMMPSVGTIERGRRSQRMSLANSRRSKSMHDTSKSGRLDSKGQYDWEDNARSKSATPSRQTYRNGMPDIG 543
            EEPGLGYFV+VTDRNSSVSGRSS+FELLEA ST SSV VPEYQDEAGGTGVGDMSLALL+VAG+CG+AIIAALLAVCFI CRRRSAEKMKTA E HDLE GGVL RTTPGRSND NTSEGRGFSMGNPLKGR+ASRSTDGGITSYGASPAGTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQVSATSRSP  +GAYTPGRSGSFRTPR+T S+GRDDLRG  MY++SVDEGYDGGR      SPRAFVSRSRS GRSR PPRGD FDR ER +SVTPGRRRS+GISPD   SRSP V GMRRSKSEGRADDHSQDSARH+T EEDVDASRWEHDGMMP+VGTIERGRRSQR+S+ANSRRSKSMHDTSKSGRLDSKGQYD EDNARSKSATPSRQTYRNGM   G
Sbjct:   59 EEPGLGYFVEVTDRNSSVSGRSSFFELLEAQSTPSSVEVPEYQDEAGGTGVGDMSLALLIVAGVCGVAIIAALLAVCFIMCRRRSAEKMKTADEAHDLELGGVLGRTTPGRSNDFNTSEGRGFSMGNPLKGRSASRSTDGGITSYGASPAGTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQVSATSRSPAAEGAYTPGRSGSFRTPRQTTSNGRDDLRGRHMYEHSVDEGYDGGR------SPRAFVSRSRSVGRSRGPPRGDGFDRGERQLSVTPGRRRSSGISPDGRLSRSPFVLGMRRSKSEGRADDHSQDSARHETVEEDVDASRWEHDGMMPAVGTIERGRRSQRLSMANSRRSKSMHDTSKSGRLDSKGQYDLEDNARSKSATPSRQTYRNGMVRFG 469          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig661.17458.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5J6K8_9PHAE0.000e+087.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FSX2_ECTSI1.170e-19687.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 182..207
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 208..1003
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..181
NoneNo IPR availableTMHMMTMhelixcoord: 184..206

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig661contigEcto-sp13_S_contig661:4053..12821 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig661.17458.1mRNA_Ecto-sp13_S_contig661.17458.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig661 3887..14419 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig661.17458.1 ID=prot_Ecto-sp13_S_contig661.17458.1|Name=mRNA_Ecto-sp13_S_contig661.17458.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1004bp
MTLLERDMASEANEESGRKPFRTTRKWRNLNLGPVLLAAAVGCLVERAAL
VEAQAEETITVTSPTSDDTIYGGESVLVEFTTTGETVVGPYDIDLFKGTN
QVAAWCSESAGCDVADGSVLVRISSNEEPGLGYFVQVTDRNSSVSGRSSY
FELLEAPSTSSSVVVPEYQDEAGGTGVGDMSLALLVVAGICGIAIIAALL
AVCFITCRRRSAEKMKTAGEVHDLEQGGVLDRTTPGRSNDLNTSEGRGFS
MGNPLKGRAASRSTDGGITSYGASPAGTDGPSSQTHPSPGRCIAMGENQR
GRSLSRGRSEGPRMYRSSPGQVSATSRSPGEDGAYTPGRSGSFRTPRRTM
SHGRDDLRGHQMYDYSVDEGYDGGRGRRSSRSPRAFVSRSRSAGRSRRPP
RGDEFDRAERHMSVTPGRRRSNGISPDEGFSRSPHVFGMRRSKSEGRADD
HSQDSARHKTAEEDVDASRWEHDGMMPSVGTIERGRRSQRMSLANSRRSK
SMHDTSKSGRLDSKGQYDWEDNARSKSATPSRQTYRNGMPDIGQEFPSDV
SWEELRSTHLRNKSKVRVRKASSLPPSYGDAMDGGVGRNGSPDDRPPPPS
YGTRDANNFTSQLSIGIPDGPSPSSFQSIRSSRSARPGLFGAFGSARRSV
TSAGSSGKFGNFGLSPGTRAVSARKAARDAQLSAERALAAAAMASRAADL
AAQAALEAEAEADAEMIADDSDQDQEVVMSPRSTSSAGGEVEGSSVREKI
KVFSGRSESIGSADKMGRGSRALPRGRSPYAQGLARGWSQADEEEVKARA
EQSSANAKEALALMGRSNSSIGKPDNSWVKNEVRGPDTAGGSTDEGGRAV
GGNRNLSSAITAPVPAVPSDPEQLAMKRRAFVKQYSQSGTSDYAEDSDYS
VFDNATAVTAGKSGTPHGRDKAAAMASGQREQDGKVAEAEMKGTPKRGRP
AEDRGRNSERGRAAVKRRSSPGHKTTKEAHAPVGTSAMMANASESGSPRA
DLP*
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