|
|
Homology
BLAST of mRNA_Ecto-sp13_S_contig661.17458.1 vs. uniprot
Match: A0A6H5J6K8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6K8_9PHAE) HSP 1 Score: 1106 bits (2860), Expect = 0.000e+0 Identity = 717/815 (87.98%), Postives = 742/815 (91.04%), Query Frame = 2
Query: 467 QVAAWCSESAGCDVADGSVLVRISSNEEPGLGYFVQVTDRNSSVSGRSSYFELLEAPSTSSSVVVPEYQDEAGGTGVGDMSLALLVVAGICGIAIIAALLAVCFITCRRRSAEKMKTAGEVHDLEQGGVLDRTTPGRSNDLNTSEGRGFSMGNPLKGRAASRSTDGGITSYGASPAGTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQVSATSRSPGEDGAYTPGRSGSFRTPRRTMSHGRDDLRGHQMYDYSVDEGYDGGRGRRSSRSPRAFVSRSRSAGRSRRPPRGDEFDRAERHMSVTPGRRRSNGISPDEGFSRSPHVFGMRRSKSEGRADDHSQDSARHKTAEEDVDASRWEHDGMMPSVGTIERGRRSQRMSLANSRRSKSMHDTSKSGRLDSKGQYDWEDNARSKSATPSRQTYRNGMPDIGQEFPSDVSWEELRSTHLRNKSKVRVRKASSLPPSYGDAMDGGVGRNGSPDDRPPPPSYGTRDANNFTSQLSIGIPDGPSPSSFQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLSPGTRAVSARKAARDAQLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMIADDSDQDQEVVMSPRSTSSAGGEVEGSSVREKIKVFSGRSESIGSADKMGRGSRALPRGRSPYAQGLARGWSQADEEEVKARAEQSSANAKEALALMGRSNSSIGKPDNSWVKNEVRGPDTAGGSTDEGGRAVGGNRNLSSAITAPVPAVPSDPEQLAMKRRAFVKQYSQSGTSDYAEDSDYSVFDNATAVTAGKSGT 2911
+VAAWCSES GCDVADGSVLVRIS+NEE GLGYF++VTDR SVSGRSSYFELLE PS SSSVVVPEYQDEAGGTGVGDMSLALL+VAGICG+AIIAALLA CFI CRRRSAEK KTA E HDLE GGVLDRTTPGRSNDLNTSEGRGFSMGNPLKGR ASRSTD SYGASPAGTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQVSATS SPG +GAYTP RSGS RTPRRTMS GR DLRG QMYD+SVDEGYDGGRGRRS RSPRA+VSRSRSAGRSRRPPRGDEFDR ER +SVTPGRRR +GISPD SRSPHV GMRRSKSEGRADDHSQDSAR++T EEDVDASRWEHDGMMP+VGTIERGRRSQR+++ANS RSKSMHDTSK GRLDSK QYDWE NARSKSATPSRQTYRN PD+ QEFPSDVSWEELRSTHLRNKSKVRVRK SSLPPSYGDAMDGG G NGSPDDRPPPPSYG RDAN+FTSQLSIGIPDGPSPSSFQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GLSPGTRAVSARKAARDAQLS XXXXXXXXXXXXXXXXXXXXX +D+DQEVVMSPRSTSSAGGEVEGSSVREKIKVFSGRSES GS DKMGRGS ALPRGRSPYA+GLARGWSQADEEEVKARAEQSSANAKEALALMG SNSS GKPDNSWVKNEVRGPDTAGGST+EGGRAVGG+RNLS AITAPVPAVPSD EQLA+KRRAFVKQYSQSGTSDYAEDSDYSVFDN A AGKSGT
Sbjct: 46 EVAAWCSESVGCDVADGSVLVRISANEEAGLGYFIEVTDRILSVSGRSSYFELLEPPSNSSSVVVPEYQDEAGGTGVGDMSLALLIVAGICGVAIIAALLAGCFIMCRRRSAEKAKTADEAHDLELGGVLDRTTPGRSNDLNTSEGRGFSMGNPLKGRTASRSTDADKMSYGASPAGTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQVSATSGSPGAEGAYTPVRSGSSRTPRRTMSSGRHDLRGRQMYDHSVDEGYDGGRGRRSFRSPRAYVSRSRSAGRSRRPPRGDEFDRGERQLSVTPGRRRPSGISPDGRRSRSPHVLGMRRSKSEGRADDHSQDSARYETVEEDVDASRWEHDGMMPAVGTIERGRRSQRLAMANSWRSKSMHDTSKLGRLDSKSQYDWEANARSKSATPSRQTYRNEQPDVDQEFPSDVSWEELRSTHLRNKSKVRVRKTSSLPPSYGDAMDGGAGGNGSPDDRPPPPSYGPRDANSFTSQLSIGIPDGPSPSSFQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFGLSPGTRAVSARKAARDAQLSAERALAAXXXXXXXXXXXXXXXXXXXXX---------ADEDQEVVMSPRSTSSAGGEVEGSSVREKIKVFSGRSESTGSVDKMGRGSPALPRGRSPYARGLARGWSQADEEEVKARAEQSSANAKEALALMGHSNSSTGKPDNSWVKNEVRGPDTAGGSTNEGGRAVGGDRNLSPAITAPVPAVPSDLEQLAIKRRAFVKQYSQSGTSDYAEDSDYSVFDNTAAAAAGKSGT 851
BLAST of mRNA_Ecto-sp13_S_contig661.17458.1 vs. uniprot
Match: D7FSX2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSX2_ECTSI) HSP 1 Score: 583 bits (1504), Expect = 2.610e-190 Identity = 365/417 (87.53%), Postives = 382/417 (91.61%), Query Frame = 2
Query: 545 EEPGLGYFVQVTDRNSSVSGRSSYFELLEAPSTSSSVVVPEYQDEAGGTGVGDMSLALLVVAGICGIAIIAALLAVCFITCRRRSAEKMKTAGEVHDLEQGGVLDRTTPGRSNDLNTSEGRGFSMGNPLKGRAASRSTDGGITSYGASPAGTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQVSATSRSPGEDGAYTPGRSGSFRTPRRTMSHGRDDLRGHQMYDYSVDEGYDGGRGRRSSRSPRAFVSRSRSAGRSRRPPRGDEFDRAERHMSVTPGRRRSNGISPDEGFSRSPHVFGMRRSKSEGRADDHSQDSARHKTAEEDVDASRWEHDGMMPSVGTIERGRRSQRMSLANSRRSKSMHDTSKSGRLDSKGQYDWEDNARSKSATPSRQTYRNGMPDIG 1795
EEPGLGYFV+VTDRNSSVSGRSS+FELLEA ST SSV VPEYQDEAGGTGVGDMSLALL+VAG+CG+AIIAALLAVCFI CRRRSAEKMKTA E HDLE GGVL RTTPGRSND NTSEGRGFSMGNPLKGR+ASRSTDGGITSYGASPAGTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQVSATSRSP +GAYTPGRSGSFRTPR+T S+GRDDLRG MY++SVDEGYDGGR SPRAFVSRSRS GRSR PPRGD FDR ER +SVTPGRRRS+GISPD SRSP V GMRRSKSEGRADDHSQDSARH+T EEDVDASRWEHDGMMP+VGTIERGRRSQR+S+ANSRRSKSMHDTSKSGRLDSKGQYD EDNARSKSATPSRQTYRNGM G
Sbjct: 59 EEPGLGYFVEVTDRNSSVSGRSSFFELLEAQSTPSSVEVPEYQDEAGGTGVGDMSLALLIVAGVCGVAIIAALLAVCFIMCRRRSAEKMKTADEAHDLELGGVLGRTTPGRSNDFNTSEGRGFSMGNPLKGRSASRSTDGGITSYGASPAGTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQVSATSRSPAAEGAYTPGRSGSFRTPRQTTSNGRDDLRGRHMYEHSVDEGYDGGR------SPRAFVSRSRSVGRSRGPPRGDGFDRGERQLSVTPGRRRSSGISPDGRLSRSPFVLGMRRSKSEGRADDHSQDSARHETVEEDVDASRWEHDGMMPAVGTIERGRRSQRLSMANSRRSKSMHDTSKSGRLDSKGQYDLEDNARSKSATPSRQTYRNGMVRFG 469
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 4776 |
| Hectar predicted targeting category | other localisation |
| Exons | 8 |
| Ec32 ortholog description | expressed unknown protein |
| Ec32 ortholog | Ec-27_006690.1 |
| Cds size | 3012 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681463910.6565874-UTR-Ecto-sp13_S_contig661:3886..4052 | 1681463910.6565874-UTR-Ecto-sp13_S_contig661:3886..4052 | Ectocarpus species13 EcNAP12_S_4_19m | UTR | Ecto-sp13_S_contig661 3887..4052 + |
| 1681463910.7550764-UTR-Ecto-sp13_S_contig661:12821..14419 | 1681463910.7550764-UTR-Ecto-sp13_S_contig661:12821..14419 | Ectocarpus species13 EcNAP12_S_4_19m | UTR | Ecto-sp13_S_contig661 12822..14419 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681463910.6660912-CDS-Ecto-sp13_S_contig661:4052..4164 | 1681463910.6660912-CDS-Ecto-sp13_S_contig661:4052..4164 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig661 4053..4164 + |
| 1681463910.6750364-CDS-Ecto-sp13_S_contig661:4883..4968 | 1681463910.6750364-CDS-Ecto-sp13_S_contig661:4883..4968 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig661 4884..4968 + |
| 1681463910.6864305-CDS-Ecto-sp13_S_contig661:6035..6141 | 1681463910.6864305-CDS-Ecto-sp13_S_contig661:6035..6141 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig661 6036..6141 + |
| 1681463910.6961496-CDS-Ecto-sp13_S_contig661:7451..7525 | 1681463910.6961496-CDS-Ecto-sp13_S_contig661:7451..7525 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig661 7452..7525 + |
| 1681463910.7052522-CDS-Ecto-sp13_S_contig661:8002..8199 | 1681463910.7052522-CDS-Ecto-sp13_S_contig661:8002..8199 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig661 8003..8199 + |
| 1681463910.715811-CDS-Ecto-sp13_S_contig661:9229..10272 | 1681463910.715811-CDS-Ecto-sp13_S_contig661:9229..10272 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig661 9230..10272 + |
| 1681463910.7259502-CDS-Ecto-sp13_S_contig661:11150..11654 | 1681463910.7259502-CDS-Ecto-sp13_S_contig661:11150..11654 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig661 11151..11654 + |
| 1681463910.7424345-CDS-Ecto-sp13_S_contig661:11930..12821 | 1681463910.7424345-CDS-Ecto-sp13_S_contig661:11930..12821 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig661 11931..12821 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig661.17458.1 >prot_Ecto-sp13_S_contig661.17458.1 ID=prot_Ecto-sp13_S_contig661.17458.1|Name=mRNA_Ecto-sp13_S_contig661.17458.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1004bp
MTLLERDMASEANEESGRKPFRTTRKWRNLNLGPVLLAAAVGCLVERAAL
VEAQAEETITVTSPTSDDTIYGGESVLVEFTTTGETVVGPYDIDLFKGTN
QVAAWCSESAGCDVADGSVLVRISSNEEPGLGYFVQVTDRNSSVSGRSSY
FELLEAPSTSSSVVVPEYQDEAGGTGVGDMSLALLVVAGICGIAIIAALL
AVCFITCRRRSAEKMKTAGEVHDLEQGGVLDRTTPGRSNDLNTSEGRGFS
MGNPLKGRAASRSTDGGITSYGASPAGTDGPSSQTHPSPGRCIAMGENQR
GRSLSRGRSEGPRMYRSSPGQVSATSRSPGEDGAYTPGRSGSFRTPRRTM
SHGRDDLRGHQMYDYSVDEGYDGGRGRRSSRSPRAFVSRSRSAGRSRRPP
RGDEFDRAERHMSVTPGRRRSNGISPDEGFSRSPHVFGMRRSKSEGRADD
HSQDSARHKTAEEDVDASRWEHDGMMPSVGTIERGRRSQRMSLANSRRSK
SMHDTSKSGRLDSKGQYDWEDNARSKSATPSRQTYRNGMPDIGQEFPSDV
SWEELRSTHLRNKSKVRVRKASSLPPSYGDAMDGGVGRNGSPDDRPPPPS
YGTRDANNFTSQLSIGIPDGPSPSSFQSIRSSRSARPGLFGAFGSARRSV
TSAGSSGKFGNFGLSPGTRAVSARKAARDAQLSAERALAAAAMASRAADL
AAQAALEAEAEADAEMIADDSDQDQEVVMSPRSTSSAGGEVEGSSVREKI
KVFSGRSESIGSADKMGRGSRALPRGRSPYAQGLARGWSQADEEEVKARA
EQSSANAKEALALMGRSNSSIGKPDNSWVKNEVRGPDTAGGSTDEGGRAV
GGNRNLSSAITAPVPAVPSDPEQLAMKRRAFVKQYSQSGTSDYAEDSDYS
VFDNATAVTAGKSGTPHGRDKAAAMASGQREQDGKVAEAEMKGTPKRGRP
AEDRGRNSERGRAAVKRRSSPGHKTTKEAHAPVGTSAMMANASESGSPRA
DLP* back to topmRNA from alignment at Ecto-sp13_S_contig661:3887..14419+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp13_S_contig661.17458.1 ID=mRNA_Ecto-sp13_S_contig661.17458.1|Name=mRNA_Ecto-sp13_S_contig661.17458.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=10533bp|location=Sequence derived from alignment at Ecto-sp13_S_contig661:3887..14419+ (Ectocarpus species13 EcNAP12_S_4_19m)
TCCCCTCTCTGCTGCGGTGGGCCGCCAACCAACCTCCACCGACAACCCGA
ACAAGCACCTATCCCCGAAGCGAGGCTCACCCTTTGTCTCCAGAGGGCAT
TGCTGCCGCGGACAGACGAACAATCTGCAAGAAGCGCGACAATCTGACCC
CCCTGTCCGCTACTTCATGACCTTACTTGAACGGGATATGGCGTCGGAGG
CCAACGAGGAGAGCGGCAGAAAGCCCTTTCGCACAACGAGGAAGTGGCGA
AATCTTAATTTGGGGCCAGTTTTGCTAGGTGAGGGACGCTATTCGCACAC
CAAGCAGCAGCCGCTCAATCTTGTATTTACTCGGTGATTGGTTGCTTCCC
CACATACAACACTCCCAGTCAAGTTTGTTGTCAACTGCTGACTGACTGAC
TGCTGTCGACTGGACGAGAGCAAGTTAGAAAAATTCATTCAAAACTTCAG
GTCCGGTGCAGACACAGCCGTAAACCCGTCAACAATCAAGCAGTTCAGAG
TCTAGAGAGGGCCGGCGGCAACATAAACAGTCCGAAAATCTCTGTCCGTG
ACGCCTTCCTCGAGATCCATGTGCCGTATCGTGGTCTGCGGCTGACCGTC
CCGGAAACGCACCCTGCCCTCTGCATACCCCTGTGAAGAATGCACCCATG
CCAAGAGCTGTCGTAAATATTCCTGTTTGTATCTAACAGCAGCGGTTAGT
ACCAAAGAGTCCCTTTTTTTGTTTGTCCACTTGGAACTGCTGTAGAAAAT
TCAACAACGGAAAACCAAACCGAGTAGGTACTCTCGCGGCACCAGTGGCC
AGAGTCACCAACGCGACACACACGTAAAGGGCGAGAAGCGGCCATTCACG
CCCCTTCGATTTTTTTTTAACTTACAACTATTATTTTAAGTTTGAAGTGC
GATCGGGTGTGTTGCCGTTGCCTTGTTTGAATTTGCTCGCCTCCCCGTTT
CGTCCGTTGGATTGATGCTGTCCTCGTGGTGGCGGCGTTGGCAACAGCAG
CAGCGGTAGGGTGCCTGGTGGAAAGAGCTGCCCTTGTCGAGGCTCAAGCC
GAAGAGACCATCACCGTCACCTCCCCGACCAGGTTGAGAAGACATTCAAG
TTTGCATACTCCTGTTGTAATTACTGCAGACAGTTGTTACATCGCATAGC
GCGCAGAGGGATTGGAGGACTCCAGAATATCTGTCGTTGATTTCTATTGA
CTTGCGGACCCCTCGGGGCCAGTTTATTTGAGTGTACCTTTTAAGGGTAA
GTTAACCTGCGACCACGGGAATCGACCGCGTCGAGTATTGGATCAGTGCG
GACATTCGAAGGTACTGGGTAGAGAGAGATCGGAACGGTTTTTAATGTGA
AGACAACAACAACAACAACAACAAGACTCCTTGTTTACTCTACTTTTTTA
CGGTAGCCAGCTATGGTATTTTTTTTTATTTTTACCGAGGAAGGAGGTCT
GTGATTGTCTACTCATGCGTATGCATACTGCTGCAGTCTTCTAAGGGGCA
ACAACGTGCGCTTCTTTCCCTACTCGCTTGTTTGTCATGATGCGTACATC
ACATGCATAAAAAGTGTTGTGCGCTGTGTGCGTATTCTGTCGGGGTGTTT
TGGCGGCTTGGGCCACGCTTGCTGTGGTGTCCAGAAGTCCAGAAGCTGTC
ACAACACTTCCTACAAGTAAAGTAAGCAAAGTCGAAAACTGGTTCCAGTA
AGTTTGGTTCAGAACCTTGGTTCGGGTGGCTCCAAACCAATGTAATACAA
TGATTCGTTGGGTCGCACGGTCATATTGATGAAATAAAAACATAATTGGA
TTTACTCAAATTCCCTGGGCCGAGTACTGTGGAAAGGAAATTCGCTTAAC
TCGGGGTAGAACGTTCAATTTCAATAACTTCGCGCAGAATTTCGCAGTAA
GAGGCAAAGCAATACCCTGAGTGAAAGATGTGGAAAGGGAAGACGTGATG
CTTCCACAGATTTTTCCGGTGGGTGCATGCCACGTTGTGATTTCTAATTG
CGCAGCAGTATATCTACGATCAGCTGAAGTGGGATTCTCGTGTAGAGATT
TCCCAGCCCCCACAACCGTGCTTACTCGATTCCAACGGCTGTCTCTGGGC
TCTTGCTGCCCTCCTCCCGCCCCCGTCTCCTTCGTGTGCATGCACCCAGT
GATGATACCATCTACGGCGGAGAATCCGTTTTGGTTGAGTTCACGACCAC
TGGAGAGACTGTGGTTGGCCCGTACGACATCGACCTCTTCAAAGGAACCA
ATCAGGTGCGGGTAATGTAGGAGAGAGGTAAAGCAGCCGCTTTTCGTGTC
TTCATTATTAGGGAAAATAAAAGCAAACACAGCAAGACTACCCGTTCGAG
ACATGACCACGGTCGAACGTGAGGTGTTGGAGTCTTTGCATAATATTATC
ACAGGATGCGTTCCTGTGTGACTCTGCCTGACTTGGTTGATTGTACAGCA
GTATCAGCAGCTATTGCTACTGGTAGTTCGTTACACGAGTGAGAATCGAA
GCAAGTGCTACTCATTTCTACAGCAGGAGAACCTTTTCTTGTGCATAGGC
ATGCATGCCAAGGGGAAGACACTCCGAGATGCATGGTCTGCCGGAACTGT
AACATGTGTCAAGAGGATGTTTCATGGACTGGTTGTTGTGAACACGGAAG
TGCAGAACAGCAGTTGTGTTTGCCGCAACACGTCGTACTGATACATTTCA
TCATCGTGTAGCACATGTGCCGTTACGAGGTCGGGATCAACGACGGTCTC
GCTGTCGGTGCAGCTCGTGTAACGGCTGATCAACTCATGATTGTTTCCGT
GACGTGGGTTGTCGAGTGGTAGCCTTGCCGCATTGTGTGCGGTTGTTCTC
CGCCCTCTAGCGAGAGCTGTGTCTGCTGATCATCATACATACGGAACACA
ACTCTCCCATTGTCTCCTGCAAAAGTGTTTTTTGTTGAAGGTACTGAATG
GACACACGAAAACAATGTCGAGTGGTCCACGTTTACATTATTTGGGTGCC
GCACACCTGACACACTACTTCACGATGATCATATTGACCAATTCTCATTC
CGATAGAGTTGAATACAGGGGTACGAAGGTTCGTAGAATATCCCGAGTTG
AGAAGAAAATCGACAAGTAGAGTTGATACGGCACAACATAAGCTACGCAT
ACGCTCCACGTCGTTGCACTTGGATACTGTAGTCATTGGGAACCAGGGTC
CCTAAGTCCACTCTACATATGTTGCGCGGTGGCGTAGCATGAACATGGGT
TCGATATGTGTGGGCCCGCTCCGCAGGGTTCAAGCATTTCTTGCTGCAGT
TTTGCATGTTCCACAGCTGTTGTGTTGCCGGTGCTGCAGAAGGCGTGGGT
GGGCGCGGCGACCGGTGTCGCCTGTTTTAAAGAAGTACTAAATGGAGAGC
GGGCAAGGTGTTTCCAACAAATTACCGGGTCAAACATGTTGCTTTCTTCA
ACACAACCAAAAGAGTACCAATGGCAGAATGCAATGCTTCCTCCACATCA
GTTCTGTCTCTTGCTGTGTGAAAATTTACATCTCTGCCGTTCTCTCTCCC
CCCCCCACCCCCTAGGTGGCTGCTTGGTGCAGCGAGTCGGCAGGTTGCGA
CGTCGCCGATGGCTCGGTGTTGGTGAGAATATCATCCAAGTGAGTGCGGA
AAACGTGGGTGGGTGGTTGTTGCTGTTGTGCTCATGTCGAAGGGCTGGGC
ACTAAACATCTGGTACCGAGTGTGACCCCGGCTGGTGTCCCCGAGTAAAG
GGTACAGCATATCGCACAATCCACTTGCACGCTTCTTCGGGCCTCGAATT
TCTGAGCTCACAGAGTTGTAATCTTAAAACGACAATGGGCTGGTTTTTCT
GCCAGCTGGTACTTGTATCGGTCTGCGCAGCATGTGTGTCCACTGCTAGG
ATGACGACAAGTATTTAGCTTGGTTCTCCGCATCACAACCGCGCAGCAGC
GCTGCCCGTGACAAGCTCTGTTCGCCGACTCCGTGCAGAACCGTTCCGTT
TTTCTTGGCCCCTCCCCACCTTGCCCCCGCTTCCCTCCCATCCTGTTACC
TTGTTTGTTATTCTAACAACCATCCTTTGCTTCGCACGGTCTCTGGTGTT
TGTAATCATCGTGCAGCGAAGAACCTGGACTTGGCTATTTCGTCCAAGTG
ACAGACCGAAATTCATCCGTTTCGGGACGGAGCTCGTACTTCGAACTCCT
GGAGGCACCAAGCACCTCTTCCTCCGTCGTGGTACCAGAGTACCAAGATG
AGGCAGGAGGAACGGGTGTCGGAGACATGAGCCTGGCGTTGCTCGTCGTG
GCCGGAATCTGCGGTGAGCATTCCAGTCGCGGGCCTTATGGTGCTTTTAT
TCTCCGTTACGATGCTCGGTGCGGGCAGGAGCTCGCTTTTAGTTCGAAGT
GGTCTCGGGGCTTGGTGATGATGATCCATGTTTTCTCAAGGCCAAGCGCC
GTCACAAGGAGTAAGTTATTCTTCGCAATATCAACACTCGATTCTAATGT
TGATTTAAACCATCTTTGTATCTGCGTTACTCCTGGCAAACGGCCGACTT
CTGCTTTTGTACCCGCACCGCAACTACTTTCCCCGTGCCCTAACCTGTTG
TGACCAGTGTGGTGTGAAACGCGCGCGTTGCCCAACCACTGCTGCGGAGC
GTCTCCCGCACGTCGGCAACAGCAAGCGTTCTTCGCAGGACGATTGACAA
CTTTGTAGCTTTGTTTTTGTCTCCGCAAGCTTCGCGGGGAGGCTCGAAAC
CGTGCGTTTTTGTAGGCGCTCACCGCTCCCGCCGCGGGGGGTAGACATCA
CGGCGAAGGGCCCCGACGGGCGGGGAATGTAGATAACGGGCCCTACGCCC
GACGCGAGAGCGGGGCGAGAACGGGCGACGCCGTCTAGAAATCGGCGAAC
TGCTTATGTTTGATATTTGTTGTCTCCCGCATCCCTTTTTTTTCGGTCTT
AGCTGCGTTGACGAAGAGCCTGTACTGGAGGTCAAAAGAACGACTCCTTT
GCGTTGCATTACCTTCGTTTTTGGAGCCGCGTAAAGCTTGATCCGTTCCT
TCCTCGAGGGTAGTTGCGATCAACCGCATCTTTGTACCTCTGTCGCAGTG
TTGTTGTGGAATGCGAGAATAACACTTCGTCGACGACTTCTGAACCTCGC
CGCTAGGAAACTTAGACTGGGGCACCAACTTGACCACGCCAGGGCGACCG
GCGTCTGCCAAGTGTTGCCTTGGCGATTGCCGTGTCTCCCCCTATCCGTT
CCCACGCCCCTTTTTTAAGACACGAGCGCCGTCCCGCTCCCCTGCCCCTC
GACCTGCGTGCTGCTATTTTGTTGCTTCTACACCTTCCGCTAGGCATCGC
CATTATTGCCGCCCTATTAGCGGTTTGCTTCATTACGTGCCGTCGCCGCA
GCGCCGAGAAAATGAAGACCGCGGGTGAAGTCCACGATCTCGAGCAAGGT
GGCGTGCTCGACCGCACGACCCCCGGCAGATCGAACGACTTGAACACGTC
AGAGGGACGCGGCTTCAGCATGGGCAACCCTCTCAAGGGGCGCGCGGCGT
CGCGATCAACCGACGGCGGTATAACGTCGTACGGCGCCAGCCCCGCTGGA
ACGGATGGGCCGTCGAGTCAAACCCACCCCAGCCCCGGGAGATGCATAGC
CATGGGCGAGAACCAGCGCGGCCGCTCGCTGTCACGGGGCCGCTCCGAGG
GGCCCCGCATGTACAGGTCTAGCCCAGGCCAGGTCTCCGCCACCTCACGT
TCGCCCGGGGAAGATGGCGCATACACCCCAGGAAGGTCTGGAAGTTTCAG
GACCCCCCGTCGGACCATGTCCCACGGTAGAGACGACCTTCGTGGGCACC
AGATGTACGACTACTCGGTTGATGAGGGCTACGACGGTGGAAGAGGTAGG
AGGTCCTCTAGATCCCCCAGAGCTTTTGTTTCCAGGTCCAGGAGCGCCGG
ACGCTCGCGAAGACCCCCCAGAGGCGACGAGTTTGATCGCGCGGAACGCC
ACATGTCAGTGACGCCAGGCCGCAGGCGTTCCAACGGCATCAGCCCAGAT
GAAGGGTTTTCTCGTTCTCCTCACGTCTTTGGTATGCGCCGTAGCAAGTC
CGAGGGCCGCGCGGATGATCATTCGCAGGATTCGGCACGCCACAAGACGG
CGGAAGAGGATGTCGATGCCTCACGTTGGGAGCATGACGGTATGATGCCC
TCGGTGGGGACGATTGAACGGGGCCGAAGGAGTCAGCGCATGTCGCTGGC
CAATTCACGGAGGTCCAAGTCGATGCACGACACATCGAAGTCGGGCAGGC
TAGACAGCAAGGGTCAGTACGACTGGGAAGATAACGCGAGGAGCAAATCT
GCCACACCTTCCCGTCAGACCTACAGGAATGGAATGGTGCGTTTCAGATT
TCGAATTGCTGTAGTAGGCCCAAAAAATTAGCAGGTTGGCTCGGTGCAAC
ATCTTGGTTGAAGTGCCTTAAGCGTTTCCCACAGTCAAAGCCCGTTGTGT
TTCTTGGCTCTATAAACGCCCCCCCCCGTTGGAGCCTGGTCCGGTGAGAA
CCCGGCGTGCTGCGTCCCGGCTTTGTAGGGATGCGAGGTCAATGGTCGAA
CGACTACGGCATGCACGATTATGAGCACACCCCCCCCCGTTGGGTTTACG
GACGCCATCAGGCAGAAAACAGCAGAGAAAAGCGAAAACCAACTTGCCGC
GGTAGCGATAACCAAGTCGAGGTGAGGGCGCGAAAATGCGGTCTGTCTTC
GTGGAGAAGCCTCATTTGGTGTCTTGCATATTATTTCTTGTTGGCTTACG
GCGCTCATCCTCGACTAAAGCGAGTATTAATGATGGTCGAATAATTAGAG
CCAGTACACAATGTGGAAGTTCTGGGGTGCCGGTTGGCCTCTCGTTATAA
TCTGGTAGCCGGCCCTCGGATACAACCTAGCGCCCCCTTGTAATCCTTTG
CAACATCGGAAACGGACTTTCCAGTTGAGTTGGTTAATGGGAGCTTTGCT
TCAGCGTGAAATAATCTCGAGGCTTGTTTATTACGAATCATGTTCTCTTA
AAACCAAACCAATGACCGTCACATGCAGTACGTTGTTCTTCGCAATGTAA
ACACTGGATTATGATGTGGGTTTCAACCGCATGTGCACCCGCGCTACACC
TGATAGCACCGTCCCTTGCACTCCCGTTGCAATCCACTTCGTTACACTAC
CTCACCCCACACTACGCTTCTTTCCTTCTATCCTTCTTCCCTCCGCCCTC
CGGCCATTTCAAAGCCTGATATCGGCCAAGAATTTCCTTCAGATGTGAGC
TGGGAAGAGCTACGTTCCACTCACCTCAGGAACAAGAGCAAGGTCCGCGT
CCGCAAGGCGTCCTCTCTACCGCCGTCCTACGGCGACGCTATGGACGGCG
GTGTAGGCCGCAATGGCTCCCCTGATGACCGCCCCCCTCCCCCTTCTTAC
GGCACCCGCGACGCCAACAACTTCACCTCGCAGCTGTCGATCGGCATCCC
CGACGGCCCCTCGCCTAGCTCGTTCCAAAGTATCAGGAGCTCCAGGTCCG
CCCGCCCCGGTCTGTTCGGCGCTTTCGGAAGCGCTAGGCGGTCTGTTACT
TCTGCCGGATCGTCCGGCAAGTTCGGGAACTTCGGGCTTTCGCCTGGCAC
GCGTGCGGTTAGCGCCAGAAAGGCGGCGAGGGATGCACAGCTCTCGGCCG
AGAGGGCGCTGGCCGCCGCCGCGATGGCGTCGCGAGCGGCGGATCTCGCA
GCGCAGGCGGCGTTGGAGGTTGGTGTTACTTTACGTCTGTGTTCATCATT
GCCTCTCTGGCGGCGTGTTACTTGTTGGGCGAAACGTGGGTTGGATGGGT
ACAACAAGATAGACCATTCTTAGTTTTCGGCCTATTGACGTCAAGAGTGT
GCCCTGGTATTTGCAATAGTTCGTAGCGGGGCTTGGAACTCATTTGTCTC
TCTTTCTTTAACGCGCCAAACAGTATCTGCGGTCGGTGGGAATACCAACT
TGCATTCCCTTTGGATTTTTTCTCTCAAAACCACTTGGAGTCAGGCGGAA
GCTGAGGCCGACGCGGAGATGATCGCCGATGACTCCGATCAGGATCAGGA
GGTGGTGATGTCTCCTCGATCAACGTCTTCGGCGGGCGGCGAGGTCGAGG
GCTCGTCTGTTCGCGAAAAGATCAAGGTCTTCAGCGGTAGGAGCGAGAGC
ATCGGTAGCGCCGACAAGATGGGCCGCGGCAGCCGTGCCCTTCCTCGGGG
AAGGTCGCCGTATGCACAAGGCCTTGCTCGGGGCTGGTCCCAGGCCGACG
AGGAAGAGGTTAAGGCTAGGGCGGAGCAGTCCTCGGCTAATGCCAAAGAG
GCTCTGGCCTTGATGGGTCGTTCGAACAGCAGCATAGGCAAACCTGACAA
TAGTTGGGTCAAGAATGAGGTGAGGGGGCCGGACACCGCTGGGGGGAGTA
CCGACGAGGGCGGTCGCGCCGTTGGTGGCAACCGAAACCTTTCTTCTGCC
ATCACCGCGCCCGTGCCCGCGGTTCCCAGCGACCCGGAGCAGCTCGCCAT
GAAGCGGAGGGCGTTCGTAAAGCAGTACAGCCAAAGCGGCACAAGCGATT
ATGCTGAGGATTCGGATTACTCTGTCTTTGACAATGCTACGGCTGTTACG
GCCGGGAAGTCAGGTACGCCGCACGGACGCGATAAGGCTGCGGCCATGGC
TTCGGGGCAACGGGAGCAGGATGGCAAAGTCGCCGAAGCCGAAATGAAAG
GAACCCCCAAGCGGGGACGCCCAGCCGAAGATCGCGGAAGGAACTCTGAA
CGCGGAAGGGCCGCGGTCAAAAGGCGATCTTCCCCTGGCCACAAAACCAC
AAAGGAAGCCCACGCGCCCGTCGGGACGTCGGCGATGATGGCAAATGCGT
CCGAGTCCGGCAGCCCGAGGGCAGATCTCCCGTAGTCAGGCACGGCACAA
CAGGGCGATTGATTCGGTGTTGGGGCGATGGATTCGGGGCTTGAACACGC
CCAATCCCATGAAAGCTGGTGCGTTCTGTCGAGCCCTCAAACTACACAAC
AAATGTGGGGCTTGTTTTTTTTTTGCCGTGTAGAACATCAAGGTTGTCCA
TTTGATGGCCATGGTACCGCCGTGAGCGTATGCCACTTTCGTTTAGCCCG
AAAACACGAGAAAGCTAGCGGGTGGGTAGCCTGCCCCAATTTTCAAAAGC
TGAAGTAGTCTGGTGCTCCTGGTTTACTCTGTAGCGCGATTTTTAAATTC
GCTTTTATGACATGGTGTGCACGCTCTACCACACCCGATGTTGGGTACAC
TTGCGAGAGGTTGGGTGGGTACCTGGCACGCTCACGTGAGTACACTATTT
TTCATGTATTGCCTTGACGGCGAGGAATGTCGCACCGATCTATTTGATCT
TGTGCGACCCCCTGTGTTTTAGTCCAGGTAGAATCCGGGAGGTTTTTTCC
TGTGCGGGGTTGTGTACATGCGCCATTATGGTTCACCAGTTTTTGATGGC
GTATCTCTGTCGTTGCGTGTGTTGTGAGGTGTTTCGCTGTTGTGTTTTCT
TCTGCAAAAAATCCAAGTCGGGCGTCTTCTGGGAGAGACCTCGGGGGTAC
GTGTAATTTTGTTGGGTGATGTTTTTGTCGGTTACGTCTCTTCGTTGCAC
TTGTTCGCTTAGGTTCCACGGAATCTGATTTGGATTATTCGGTAAGAGAG
AGCTAGTGGGTGCTGAACGTGCAAACAAAGTACGGTGGATGCGAAATTTT
ATGTACTAGCGTCCTGTTGTTGATGTGTGATCGTCTGCACATTGTATTTT
TGGAGGGCGTTGGGCGTGCCGGTTGATCAAGAGCAGCTGTCATAGAGGCT
GCCGGGGGCTTCCTAGTTAGCTGTCCTTTTCAAACCCCGTGTTTTGAAAC
CTTGTCTTGCCTGTCGTACCCTGTATACCTGTTGCATGTGGCGTTGACCA
GCGCTGCAATGTTTCTTTATTTTTCGGAAGGCGGTCTGTGGATCTGGGAG
GGTCGGAAAATATGAAATTGACTTGTCTAGTTGAATGTGACGGGTGAGCC
AAAATAGGATGTTACCCGGTAGAATACAAGTTGGTGCACGTACAGCATAC
AAGGCCAGAGTTGTTTAGTCCCGTAATTCCGTATATTTGTCTACTCTGGC
GTGATAGTAATCTAACGCACACCGTCGTCTACTCTTTTGTCAGCCGTCGG
TGACTCGTATTTCGTATTTACTGGTGCTGCTGATTCCGCCGCCGCCGCCG
CTTCGAGGATGGTATATGACGGACAGCGTATGTATGTATGACAAGCCGGG
GGTAGCCTTTGTTCTCGGTTGAGGTCCCACTATCTATTTTTGCAGGTTTT
TGCTTGTGGCCGCTTGTGTGGGATGGCAGGAGACAGGCTAGCGCAGGCGG
AGTTTTTAGAACTTGCCGTCACTTTTCAACGAGATGAGTTAGTCTCTCGT
GGGTGGTAATGGGTTGGGGCGGAATATGTGTACCATATGTGTTGAAGATG
AAAAGAGTTATCTCGTGACAGATTTGAATGGGA back to topCoding sequence (CDS) from alignment at Ecto-sp13_S_contig661:3887..14419+ >mRNA_Ecto-sp13_S_contig661.17458.1 ID=mRNA_Ecto-sp13_S_contig661.17458.1|Name=mRNA_Ecto-sp13_S_contig661.17458.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=3012bp|location=Sequence derived from alignment at Ecto-sp13_S_contig661:3887..14419+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGACCTTACTTGAACGGGATATGGCGTCGGAGGCCAACGAGGAGAGCGG
CAGAAAGCCCTTTCGCACAACGAGGAAGTGGCGAAATCTTAATTTGGGGC
CAGTTTTGCTAGCAGCAGCGGTAGGGTGCCTGGTGGAAAGAGCTGCCCTT
GTCGAGGCTCAAGCCGAAGAGACCATCACCGTCACCTCCCCGACCAGTGA
TGATACCATCTACGGCGGAGAATCCGTTTTGGTTGAGTTCACGACCACTG
GAGAGACTGTGGTTGGCCCGTACGACATCGACCTCTTCAAAGGAACCAAT
CAGGTGGCTGCTTGGTGCAGCGAGTCGGCAGGTTGCGACGTCGCCGATGG
CTCGGTGTTGGTGAGAATATCATCCAACGAAGAACCTGGACTTGGCTATT
TCGTCCAAGTGACAGACCGAAATTCATCCGTTTCGGGACGGAGCTCGTAC
TTCGAACTCCTGGAGGCACCAAGCACCTCTTCCTCCGTCGTGGTACCAGA
GTACCAAGATGAGGCAGGAGGAACGGGTGTCGGAGACATGAGCCTGGCGT
TGCTCGTCGTGGCCGGAATCTGCGGCATCGCCATTATTGCCGCCCTATTA
GCGGTTTGCTTCATTACGTGCCGTCGCCGCAGCGCCGAGAAAATGAAGAC
CGCGGGTGAAGTCCACGATCTCGAGCAAGGTGGCGTGCTCGACCGCACGA
CCCCCGGCAGATCGAACGACTTGAACACGTCAGAGGGACGCGGCTTCAGC
ATGGGCAACCCTCTCAAGGGGCGCGCGGCGTCGCGATCAACCGACGGCGG
TATAACGTCGTACGGCGCCAGCCCCGCTGGAACGGATGGGCCGTCGAGTC
AAACCCACCCCAGCCCCGGGAGATGCATAGCCATGGGCGAGAACCAGCGC
GGCCGCTCGCTGTCACGGGGCCGCTCCGAGGGGCCCCGCATGTACAGGTC
TAGCCCAGGCCAGGTCTCCGCCACCTCACGTTCGCCCGGGGAAGATGGCG
CATACACCCCAGGAAGGTCTGGAAGTTTCAGGACCCCCCGTCGGACCATG
TCCCACGGTAGAGACGACCTTCGTGGGCACCAGATGTACGACTACTCGGT
TGATGAGGGCTACGACGGTGGAAGAGGTAGGAGGTCCTCTAGATCCCCCA
GAGCTTTTGTTTCCAGGTCCAGGAGCGCCGGACGCTCGCGAAGACCCCCC
AGAGGCGACGAGTTTGATCGCGCGGAACGCCACATGTCAGTGACGCCAGG
CCGCAGGCGTTCCAACGGCATCAGCCCAGATGAAGGGTTTTCTCGTTCTC
CTCACGTCTTTGGTATGCGCCGTAGCAAGTCCGAGGGCCGCGCGGATGAT
CATTCGCAGGATTCGGCACGCCACAAGACGGCGGAAGAGGATGTCGATGC
CTCACGTTGGGAGCATGACGGTATGATGCCCTCGGTGGGGACGATTGAAC
GGGGCCGAAGGAGTCAGCGCATGTCGCTGGCCAATTCACGGAGGTCCAAG
TCGATGCACGACACATCGAAGTCGGGCAGGCTAGACAGCAAGGGTCAGTA
CGACTGGGAAGATAACGCGAGGAGCAAATCTGCCACACCTTCCCGTCAGA
CCTACAGGAATGGAATGCCTGATATCGGCCAAGAATTTCCTTCAGATGTG
AGCTGGGAAGAGCTACGTTCCACTCACCTCAGGAACAAGAGCAAGGTCCG
CGTCCGCAAGGCGTCCTCTCTACCGCCGTCCTACGGCGACGCTATGGACG
GCGGTGTAGGCCGCAATGGCTCCCCTGATGACCGCCCCCCTCCCCCTTCT
TACGGCACCCGCGACGCCAACAACTTCACCTCGCAGCTGTCGATCGGCAT
CCCCGACGGCCCCTCGCCTAGCTCGTTCCAAAGTATCAGGAGCTCCAGGT
CCGCCCGCCCCGGTCTGTTCGGCGCTTTCGGAAGCGCTAGGCGGTCTGTT
ACTTCTGCCGGATCGTCCGGCAAGTTCGGGAACTTCGGGCTTTCGCCTGG
CACGCGTGCGGTTAGCGCCAGAAAGGCGGCGAGGGATGCACAGCTCTCGG
CCGAGAGGGCGCTGGCCGCCGCCGCGATGGCGTCGCGAGCGGCGGATCTC
GCAGCGCAGGCGGCGTTGGAGGCGGAAGCTGAGGCCGACGCGGAGATGAT
CGCCGATGACTCCGATCAGGATCAGGAGGTGGTGATGTCTCCTCGATCAA
CGTCTTCGGCGGGCGGCGAGGTCGAGGGCTCGTCTGTTCGCGAAAAGATC
AAGGTCTTCAGCGGTAGGAGCGAGAGCATCGGTAGCGCCGACAAGATGGG
CCGCGGCAGCCGTGCCCTTCCTCGGGGAAGGTCGCCGTATGCACAAGGCC
TTGCTCGGGGCTGGTCCCAGGCCGACGAGGAAGAGGTTAAGGCTAGGGCG
GAGCAGTCCTCGGCTAATGCCAAAGAGGCTCTGGCCTTGATGGGTCGTTC
GAACAGCAGCATAGGCAAACCTGACAATAGTTGGGTCAAGAATGAGGTGA
GGGGGCCGGACACCGCTGGGGGGAGTACCGACGAGGGCGGTCGCGCCGTT
GGTGGCAACCGAAACCTTTCTTCTGCCATCACCGCGCCCGTGCCCGCGGT
TCCCAGCGACCCGGAGCAGCTCGCCATGAAGCGGAGGGCGTTCGTAAAGC
AGTACAGCCAAAGCGGCACAAGCGATTATGCTGAGGATTCGGATTACTCT
GTCTTTGACAATGCTACGGCTGTTACGGCCGGGAAGTCAGGTACGCCGCA
CGGACGCGATAAGGCTGCGGCCATGGCTTCGGGGCAACGGGAGCAGGATG
GCAAAGTCGCCGAAGCCGAAATGAAAGGAACCCCCAAGCGGGGACGCCCA
GCCGAAGATCGCGGAAGGAACTCTGAACGCGGAAGGGCCGCGGTCAAAAG
GCGATCTTCCCCTGGCCACAAAACCACAAAGGAAGCCCACGCGCCCGTCG
GGACGTCGGCGATGATGGCAAATGCGTCCGAGTCCGGCAGCCCGAGGGCA
GATCTCCCGTAG back to top
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