prot_Ecto-sp13_S_contig65990.17442.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig65990.17442.1
Unique Nameprot_Ecto-sp13_S_contig65990.17442.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length67
Homology
BLAST of mRNA_Ecto-sp13_S_contig65990.17442.1 vs. uniprot
Match: D7FGX0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGX0_ECTSI)

HSP 1 Score: 128 bits (322), Expect = 5.140e-33
Identity = 64/66 (96.97%), Postives = 66/66 (100.00%), Query Frame = 0
Query:    2 QADGFDVAGSFLLRSLAKPSLNVDLALRMPSECIVSRDSLNHRYLDKRALYAGHLAKTAMDAAGSL 67
            +ADGFDVAGSFLLRSLAKPSLNVDLALRMPSECIVSRDSLNHRYLDKRALYAGH+AKTAMDAAGSL
Sbjct:  177 EADGFDVAGSFLLRSLAKPSLNVDLALRMPSECIVSRDSLNHRYLDKRALYAGHVAKTAMDAAGSL 242          
BLAST of mRNA_Ecto-sp13_S_contig65990.17442.1 vs. uniprot
Match: A0A6H5JEV9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEV9_9PHAE)

HSP 1 Score: 126 bits (317), Expect = 2.430e-32
Identity = 63/66 (95.45%), Postives = 66/66 (100.00%), Query Frame = 0
Query:    2 QADGFDVAGSFLLRSLAKPSLNVDLALRMPSECIVSRDSLNHRYLDKRALYAGHLAKTAMDAAGSL 67
            +A+GFDVAGSFLLRSLAKPSLNVDLALRMPSECIVSRDSLNHRYLDKRALYAGHLAKTAMDAAG+L
Sbjct:  182 EANGFDVAGSFLLRSLAKPSLNVDLALRMPSECIVSRDSLNHRYLDKRALYAGHLAKTAMDAAGAL 247          
BLAST of mRNA_Ecto-sp13_S_contig65990.17442.1 vs. uniprot
Match: A0A2R5G2X0_9STRA (Nucleolar protein 6 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G2X0_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 5.310e-13
Identity = 33/56 (58.93%), Postives = 42/56 (75.00%), Query Frame = 0
Query:    4 DGFDVAGSFLLRSLAKPSLNVDLALRMPSECIVSRDSLNHRYLDKRALYAGHLAKT 59
            +  DV GS+LL ++ KPS  VDLA+RMP++C   +D LNHRYLDKR LY G LAK+
Sbjct:  192 EAVDVVGSYLLGTVTKPSRTVDLAIRMPADCFKRKDYLNHRYLDKRRLYLGVLAKS 247          
BLAST of mRNA_Ecto-sp13_S_contig65990.17442.1 vs. uniprot
Match: L1JNQ1_GUITC (Uncharacterized protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JNQ1_GUITC)

HSP 1 Score: 64.7 bits (156), Expect = 1.460e-10
Identity = 27/52 (51.92%), Postives = 41/52 (78.85%), Query Frame = 0
Query:    7 DVAGSFLLRSLAKPSLNVDLALRMPSECIVSRDSLNHRYLDKRALYAGHLAK 58
            ++ GSFLLR+L KP LNVD+A+ MP++C+ ++D LN R++ KR +Y  H+AK
Sbjct:  170 ELVGSFLLRTLVKPDLNVDMAVEMPADCLHAKDFLNGRFMYKRNMYLSHIAK 221          
BLAST of mRNA_Ecto-sp13_S_contig65990.17442.1 vs. uniprot
Match: A0A444CCS9_ENSVE (Nrap domain-containing protein n=1 Tax=Ensete ventricosum TaxID=4639 RepID=A0A444CCS9_ENSVE)

HSP 1 Score: 61.2 bits (147), Expect = 1.700e-9
Identity = 28/56 (50.00%), Postives = 37/56 (66.07%), Query Frame = 0
Query:    4 DGFDVAGSFLLRSLAKPSLNVDLALRMPSECIVSRDSLNHRYLDKRALYAGHLAKT 59
            +   V GS+ +RS+AKP +NVDL +RMP EC   +D LNHRY  KR LY   + K+
Sbjct:   72 ESIQVGGSYSIRSVAKPDINVDLLVRMPKECFHEKDYLNHRYHAKRLLYLRVIEKS 127          
BLAST of mRNA_Ecto-sp13_S_contig65990.17442.1 vs. uniprot
Match: A0A427APH3_ENSVE (Nrap domain-containing protein n=1 Tax=Ensete ventricosum TaxID=4639 RepID=A0A427APH3_ENSVE)

HSP 1 Score: 60.8 bits (146), Expect = 3.250e-9
Identity = 27/49 (55.10%), Postives = 34/49 (69.39%), Query Frame = 0
Query:    4 DGFDVAGSFLLRSLAKPSLNVDLALRMPSECIVSRDSLNHRYLDKRALY 52
            +   V GS+ +RS+AKP +NVDL +RMP EC   +D LNHRY  KR LY
Sbjct:  261 ESIQVGGSYSIRSVAKPDINVDLLVRMPKECFHEKDYLNHRYHAKRLLY 309          
BLAST of mRNA_Ecto-sp13_S_contig65990.17442.1 vs. uniprot
Match: A0A7S3ZGA4_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3ZGA4_9EUKA)

HSP 1 Score: 57.8 bits (138), Expect = 3.460e-9
Identity = 27/51 (52.94%), Postives = 39/51 (76.47%), Query Frame = 0
Query:    8 VAGSFLLRSLAKPSLNVDLALRMPSECIVSRDSLNHRYLDKRALYAGHLAK 58
            V GS++LR +AKP  NVDLAL +PS+ ++ +D LN++YL KRA YA  +A+
Sbjct:   22 VVGSYILRVVAKPVTNVDLALEIPSDSLMQKDYLNYKYLAKRARYAEAVAE 72          
BLAST of mRNA_Ecto-sp13_S_contig65990.17442.1 vs. uniprot
Match: A0A803Q1Y2_CANSA (Uncharacterized protein n=4 Tax=Cannabis sativa TaxID=3483 RepID=A0A803Q1Y2_CANSA)

HSP 1 Score: 60.5 bits (145), Expect = 4.550e-9
Identity = 25/47 (53.19%), Postives = 34/47 (72.34%), Query Frame = 0
Query:    6 FDVAGSFLLRSLAKPSLNVDLALRMPSECIVSRDSLNHRYLDKRALY 52
            F++ GS+ ++ +AKP +NVDL LR+P EC   +D LNHRY  KR LY
Sbjct:   71 FEIGGSYSIKCIAKPDINVDLFLRLPKECFHEKDYLNHRYHGKRCLY 117          
BLAST of mRNA_Ecto-sp13_S_contig65990.17442.1 vs. uniprot
Match: A0A0M0JU12_9EUKA (Nucleolar protein 6 n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JU12_9EUKA)

HSP 1 Score: 60.1 bits (144), Expect = 5.090e-9
Identity = 28/61 (45.90%), Postives = 40/61 (65.57%), Query Frame = 0
Query:    7 DVAGSFLLRSLAKPSLNVDLALRMPSECIVSRDSLNHRYLDKRALYAGHLAKTAMDAAGSL 67
            D+ GS+LLR++  P LNVD+A+ +P+   + +D L+ RY DKR LY  HLA     AA S+
Sbjct:  112 DLVGSYLLRTVTAPELNVDVAVELPASMFLEKDYLDQRYADKRLLYLTHLAHLLSTAAASV 172          
BLAST of mRNA_Ecto-sp13_S_contig65990.17442.1 vs. uniprot
Match: B9ST37_RICCO (Nucleolar RNA-associated protein, putative n=2 Tax=Ricinus communis TaxID=3988 RepID=B9ST37_RICCO)

HSP 1 Score: 60.1 bits (144), Expect = 6.230e-9
Identity = 28/61 (45.90%), Postives = 40/61 (65.57%), Query Frame = 0
Query:    6 FDVAGSFLLRSLAKPSLNVDLALRMPSECIVSRDSLNHRYLDKRALYAGHLAKTAMDAAGS 66
            F++ GS+ ++ +AKPS+NVDL L +P EC   +D LNHRY  KR LY   + K  M ++ S
Sbjct:   77 FEIRGSYSIKCIAKPSINVDLFLHLPKECFHEKDYLNHRYHAKRFLYLCMVKKYLMKSSSS 137          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig65990.17442.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FGX0_ECTSI5.140e-3396.97Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JEV9_9PHAE2.430e-3295.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2R5G2X0_9STRA5.310e-1358.93Nucleolar protein 6 n=1 Tax=Hondaea fermentalgiana... [more]
L1JNQ1_GUITC1.460e-1051.92Uncharacterized protein n=2 Tax=Guillardia theta T... [more]
A0A444CCS9_ENSVE1.700e-950.00Nrap domain-containing protein n=1 Tax=Ensete vent... [more]
A0A427APH3_ENSVE3.250e-955.10Nrap domain-containing protein n=1 Tax=Ensete vent... [more]
A0A7S3ZGA4_9EUKA3.460e-952.94Hypothetical protein (Fragment) n=1 Tax=Lotharella... [more]
A0A803Q1Y2_CANSA4.550e-953.19Uncharacterized protein n=4 Tax=Cannabis sativa Ta... [more]
A0A0M0JU12_9EUKA5.090e-945.90Nucleolar protein 6 n=1 Tax=Chrysochromulina tobin... [more]
B9ST37_RICCO6.230e-945.90Nucleolar RNA-associated protein, putative n=2 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035082Nrap protein domain 1PFAMPF03813Nrapcoord: 24..61
e-value: 2.9E-10
score: 40.4
NoneNo IPR availableGENE3D3.30.460.10coord: 2..66
e-value: 1.8E-14
score: 55.8
IPR005554NOL6/Upt22PANTHERPTHR17972NUCLEOLAR RNA-ASSOCIATED PROTEINcoord: 6..60

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig65990contigEcto-sp13_S_contig65990:545..745 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig65990.17442.1mRNA_Ecto-sp13_S_contig65990.17442.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig65990 545..745 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig65990.17442.1 ID=prot_Ecto-sp13_S_contig65990.17442.1|Name=mRNA_Ecto-sp13_S_contig65990.17442.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=67bp
VQADGFDVAGSFLLRSLAKPSLNVDLALRMPSECIVSRDSLNHRYLDKRA
LYAGHLAKTAMDAAGSL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035082Nrap_D1
IPR005554NOL6/Upt22