prot_Ecto-sp13_S_contig6585.17418.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6585.17418.1
Unique Nameprot_Ecto-sp13_S_contig6585.17418.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length118
Homology
BLAST of mRNA_Ecto-sp13_S_contig6585.17418.1 vs. uniprot
Match: A0A6H5L6H2_9PHAE (Ubiquitin-like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6H2_9PHAE)

HSP 1 Score: 216 bits (549), Expect = 3.570e-66
Identity = 110/118 (93.22%), Postives = 113/118 (95.76%), Query Frame = 0
Query:    1 ASIYPGVDGGCVSSDPPWLSSHRTIANRRRSSTDFDNNVGEDGGGDATIDADIRLVFAGKDLQRGRPLLGYGLHAESTVHILGRLRGGAQLGKVVKGRSQVKKKGAEKPKEYAELQAK 118
            ASIYPG DGGCVSSDPPWLSSHRT ANRRRSSTD D NVGEDGGGDATIDADIRLVFAGKDLQ+GRPLLGYGL A+STVH+LGRLRGGAQLGKVVKGRSQVKKKGAEKPKEYAELQAK
Sbjct:   36 ASIYPGADGGCVSSDPPWLSSHRTRANRRRSSTDCDKNVGEDGGGDATIDADIRLVFAGKDLQKGRPLLGYGLQADSTVHVLGRLRGGAQLGKVVKGRSQVKKKGAEKPKEYAELQAK 153          
BLAST of mRNA_Ecto-sp13_S_contig6585.17418.1 vs. uniprot
Match: D7FVY5_ECTSI (Flagellar associated protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVY5_ECTSI)

HSP 1 Score: 211 bits (538), Expect = 7.350e-63
Identity = 107/118 (90.68%), Postives = 112/118 (94.92%), Query Frame = 0
Query:    1 ASIYPGVDGGCVSSDPPWLSSHRTIANRRRSSTDFDNNVGEDGGGDATIDADIRLVFAGKDLQRGRPLLGYGLHAESTVHILGRLRGGAQLGKVVKGRSQVKKKGAEKPKEYAELQAK 118
            A+IYPG DGGCVSSDPPWLSS RTIAN+RRSSTDFD +VGEDGGGD  IDADIRLVFAGKDLQRGRPLLGYGL A+STVH+LGRLRGGAQLGKVVKGRSQVKKKGAEKPKEYAELQAK
Sbjct:   48 ANIYPGADGGCVSSDPPWLSSQRTIANKRRSSTDFDKHVGEDGGGDTIIDADIRLVFAGKDLQRGRPLLGYGLQADSTVHVLGRLRGGAQLGKVVKGRSQVKKKGAEKPKEYAELQAK 165          
BLAST of mRNA_Ecto-sp13_S_contig6585.17418.1 vs. uniprot
Match: A0A835ZEY8_9STRA (Flagellar associated protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEY8_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 4.740e-14
Identity = 46/72 (63.89%), Postives = 52/72 (72.22%), Query Frame = 0
Query:   47 ATIDADIRLVFAGKDLQRGRPLLGYGLHAESTVHILGRLRGGAQLGKVVKGRSQVKKKGAEKPKEYAELQAK 118
            AT D D  LVFAGK +     L  YGL   ST+H+LGRLRGGAQLGKVVKGRSQVKKK   K K++ +LQAK
Sbjct:   23 ATADGDCCLVFAGKCMVPDVSLEEYGLQEGSTIHVLGRLRGGAQLGKVVKGRSQVKKKDG-KSKDFGDLQAK 93          
BLAST of mRNA_Ecto-sp13_S_contig6585.17418.1 vs. uniprot
Match: B0R193_DANRE (Ubiquitin B n=1 Tax=Danio rerio TaxID=7955 RepID=B0R193_DANRE)

HSP 1 Score: 48.5 bits (114), Expect = 4.650e-5
Identity = 22/38 (57.89%), Postives = 29/38 (76.32%), Query Frame = 0
Query:   54 RLVFAGKDLQRGRPLLGYGLHAESTVHILGRLRGGAQL 91
            RL+FAGK L+ GR L  Y +  EST+H++ RLRGGAQ+
Sbjct:   42 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAQI 79          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6585.17418.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5L6H2_9PHAE3.570e-6693.22Ubiquitin-like domain-containing protein n=1 Tax=E... [more]
D7FVY5_ECTSI7.350e-6390.68Flagellar associated protein n=1 Tax=Ectocarpus si... [more]
A0A835ZEY8_9STRA4.740e-1463.89Flagellar associated protein n=1 Tax=Tribonema min... [more]
B0R193_DANRE4.650e-557.89Ubiquitin B n=1 Tax=Danio rerio TaxID=7955 RepID=B... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.20.90coord: 47..114
e-value: 6.4E-8
score: 34.1
IPR000626Ubiquitin domainPROSITEPS50053UBIQUITIN_2coord: 52..88
score: 10.832
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 52..89

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6585contigEcto-sp13_S_contig6585:4497..5609 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6585.17418.1mRNA_Ecto-sp13_S_contig6585.17418.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6585 4497..5609 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6585.17418.1 ID=prot_Ecto-sp13_S_contig6585.17418.1|Name=mRNA_Ecto-sp13_S_contig6585.17418.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=118bp
ASIYPGVDGGCVSSDPPWLSSHRTIANRRRSSTDFDNNVGEDGGGDATID
ADIRLVFAGKDLQRGRPLLGYGLHAESTVHILGRLRGGAQLGKVVKGRSQ
VKKKGAEKPKEYAELQAK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000626Ubiquitin_dom
IPR029071Ubiquitin-like_domsf