prot_Ecto-sp13_S_contig6573.17401.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6573.17401.1
Unique Nameprot_Ecto-sp13_S_contig6573.17401.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length245
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6573.17401.1 vs. uniprot
Match: D8LJW2_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJW2_ECTSI)

HSP 1 Score: 387 bits (993), Expect = 8.360e-135
Identity = 193/197 (97.97%), Postives = 195/197 (98.98%), Query Frame = 0 
Query:    1 VFGVEAVVFPVSNPYAPGVPVRTFHDPSARRATARGVLVNPAEGDVDQRGSSGISAAGLPSYTSSLLPIRFTNEEVQLNEGCLFRVHIDADWVETDVIAIEFRLLTTPLPENDAAPTEDVIAPAGATVAPDKKPITLKEVGKVTLHTKCASSKGGLHRYHPLVFKQPHLCVVDITLHMALTSVNHPGGPAGLAAAIA 197
            VFGVEAVVFPVSNPYAPGVPVRTFHDPSARR+TARGVLVNPAEGDVDQRGSSGISAAGLPSYTSSLLPIRFTNEEVQLNEGCLFRVHIDADWVETDVIAIEFRLLTTPLPENDAAPTEDVIA AGATV P+KKPITLKEVGKVTLHTKCASSKGGLHRYHPLVFKQPHLCVVDITLHMALTSVNHPGGPAGLAAAIA
Sbjct:   13 VFGVEAVVFPVSNPYAPGVPVRTFHDPSARRSTARGVLVNPAEGDVDQRGSSGISAAGLPSYTSSLLPIRFTNEEVQLNEGCLFRVHIDADWVETDVIAIEFRLLTTPLPENDAAPTEDVIAAAGATVTPEKKPITLKEVGKVTLHTKCASSKGGLHRYHPLVFKQPHLCVVDITLHMALTSVNHPGGPAGLAAAIA 209
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BLAST of mRNA_Ecto-sp13_S_contig6573.17401.1 vs. uniprot
Match: A0A6H5K5V1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5V1_9PHAE)

HSP 1 Score: 121 bits (303), Expect = 3.260e-28
Identity = 67/68 (98.53%), Postives = 67/68 (98.53%), Query Frame = 0 
Query:  178 MALTSVNHPGGPAGLAAAIAANAFPSEEVGAPPAPRGGESPARRASSASLSTPPRSEGRRRSVSGREL 245
            MALTSV HPGGPAGLAAAIAANAFPSEEVGAPPAPRGGESPARRASSASLSTPPRSEGRRRSVSGREL
Sbjct:    1 MALTSVTHPGGPAGLAAAIAANAFPSEEVGAPPAPRGGESPARRASSASLSTPPRSEGRRRSVSGREL 68
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BLAST of mRNA_Ecto-sp13_S_contig6573.17401.1 vs. uniprot
Match: A0A7R9YF49_9STRA (Hypothetical protein n=4 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YF49_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 7.800e-6
Identity = 34/124 (27.42%), Postives = 62/124 (50.00%), Query Frame = 0 
Query:   61 SYTSSLLPIRFTNEEVQLNEGCLFRVHIDADWVETDVIAIEFRLLTTPLPEN-DAAPTEDVIAPAGATVAPDKKPITLKEVGKVTLHTKCASSKGGLHRYHPLVFKQPHLCVVDITLHMALTSV 183
            SY + ++PIR+ +E V+LNEG  F++   AD  +TD   +   L   P  +  ++    D+I P         + + +++V +            GLH ++P+ F   HLC V++T H  +T++
Sbjct:   81 SYVTRVIPIRYRDETVELNEGAHFQLTFPADQADTDA-ELHVALFFCPFVKGVESRSLADLIPPQPQFECVATQRLLIRQVAR------------GLHAFYPVTFDDMHLCEVEMTFHTLVTNL 191
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6573.17401.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LJW2_ECTSI8.360e-13597.97Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5K5V1_9PHAE3.260e-2898.53Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A7R9YF49_9STRA7.800e-627.42Hypothetical protein n=4 Tax=Pinguiococcus pyrenoi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022122Protein FAM135PFAMPF12394DUF3657coord: 137..179
e-value: 2.3E-5
score: 24.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6573contigEcto-sp13_S_contig6573:1395..3899 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6573.17401.1mRNA_Ecto-sp13_S_contig6573.17401.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6573 1393..3899 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6573.17401.1 ID=prot_Ecto-sp13_S_contig6573.17401.1|Name=mRNA_Ecto-sp13_S_contig6573.17401.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=245bp
VFGVEAVVFPVSNPYAPGVPVRTFHDPSARRATARGVLVNPAEGDVDQRG
SSGISAAGLPSYTSSLLPIRFTNEEVQLNEGCLFRVHIDADWVETDVIAI
EFRLLTTPLPENDAAPTEDVIAPAGATVAPDKKPITLKEVGKVTLHTKCA
SSKGGLHRYHPLVFKQPHLCVVDITLHMALTSVNHPGGPAGLAAAIAANA
FPSEEVGAPPAPRGGESPARRASSASLSTPPRSEGRRRSVSGREL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022122DUF3657