prot_Ecto-sp13_S_contig6547.17363.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6547.17363.1
Unique Nameprot_Ecto-sp13_S_contig6547.17363.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length47
Homology
BLAST of mRNA_Ecto-sp13_S_contig6547.17363.1 vs. uniprot
Match: D8LHJ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHJ0_ECTSI)

HSP 1 Score: 90.9 bits (224), Expect = 2.890e-23
Identity = 43/46 (93.48%), Postives = 45/46 (97.83%), Query Frame = 0
Query:    1 MFEKFGVPAEFMSKDAVLACFSLGRTTASLVDVGGDSAVVTPVYDG 46
            MF+KFGVPAEFMSKDAVLACFS+GRTTASLVDVGGD AVVTPVYDG
Sbjct:    7 MFDKFGVPAEFMSKDAVLACFSIGRTTASLVDVGGDIAVVTPVYDG 52          
BLAST of mRNA_Ecto-sp13_S_contig6547.17363.1 vs. uniprot
Match: D8LHI8_ECTSI (Protein binding protein, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHI8_ECTSI)

HSP 1 Score: 94.4 bits (233), Expect = 1.860e-21
Identity = 45/46 (97.83%), Postives = 46/46 (100.00%), Query Frame = 0
Query:    1 MFEKFGVPAEFMSKDAVLACFSLGRTTASLVDVGGDSAVVTPVYDG 46
            MFEKFGVPAEFMSKDAVLACFS+GRTTASLVDVGGDSAVVTPVYDG
Sbjct:  177 MFEKFGVPAEFMSKDAVLACFSIGRTTASLVDVGGDSAVVTPVYDG 222          
BLAST of mRNA_Ecto-sp13_S_contig6547.17363.1 vs. uniprot
Match: A0A6H5KHN4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHN4_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 5.000e-18
Identity = 39/46 (84.78%), Postives = 43/46 (93.48%), Query Frame = 0
Query:    1 MFEKFGVPAEFMSKDAVLACFSLGRTTASLVDVGGDSAVVTPVYDG 46
            MFE+FGVPAEF+SKD VL CFS+GRTTASLVDVGGDSAV TPV+DG
Sbjct:  233 MFEEFGVPAEFVSKDGVLPCFSIGRTTASLVDVGGDSAVATPVFDG 278          
BLAST of mRNA_Ecto-sp13_S_contig6547.17363.1 vs. uniprot
Match: D8LHJ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHJ1_ECTSI)

HSP 1 Score: 68.2 bits (165), Expect = 3.310e-14
Identity = 32/36 (88.89%), Postives = 35/36 (97.22%), Query Frame = 0
Query:    3 EKFGVPAEFMSKDAVLACFSLGRTTASLVDVGGDSA 38
            E+FGVPAEFMSKDAVLACFS+GRTTASLVDVGG +A
Sbjct:    9 EEFGVPAEFMSKDAVLACFSIGRTTASLVDVGGGTA 44          
BLAST of mRNA_Ecto-sp13_S_contig6547.17363.1 vs. uniprot
Match: A0A835Z589_9STRA (Actin family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z589_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 6.010e-11
Identity = 32/46 (69.57%), Postives = 37/46 (80.43%), Query Frame = 0
Query:    1 MFEKFGVPAEFMSKDAVLACFSLGRTTASLVDVGGDSAVVTPVYDG 46
            MFEKF VPA FM +DAVL+CFSLG+TT + VDVGG + V TPV DG
Sbjct:  112 MFEKFDVPALFMGRDAVLSCFSLGKTTGTAVDVGGHTTV-TPVTDG 156          
BLAST of mRNA_Ecto-sp13_S_contig6547.17363.1 vs. uniprot
Match: A0A7S3UN21_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UN21_HETAK)

HSP 1 Score: 62.8 bits (151), Expect = 2.290e-10
Identity = 29/45 (64.44%), Postives = 35/45 (77.78%), Query Frame = 0
Query:    2 FEKFGVPAEFMSKDAVLACFSLGRTTASLVDVGGDSAVVTPVYDG 46
            FEK+ VPA F+SKDAVL+CF+ GRTT  + DVG + A VTPV DG
Sbjct:  102 FEKYDVPALFISKDAVLSCFAAGRTTGLVADVGAELATVTPVSDG 146          
BLAST of mRNA_Ecto-sp13_S_contig6547.17363.1 vs. uniprot
Match: A0A7S0VUY7_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VUY7_9CRYP)

HSP 1 Score: 60.1 bits (144), Expect = 2.010e-9
Identity = 28/46 (60.87%), Postives = 37/46 (80.43%), Query Frame = 0
Query:    1 MFEKFGVPAEFMSKDAVLACFSLGRTTASLVDVGGDSAVVTPVYDG 46
            MFEK+ VPA F+SK+AVL+ FS GR+TA ++D GG S  V+PV+DG
Sbjct:   38 MFEKYKVPAVFVSKNAVLSAFSCGRSTAVVLDSGGGSTCVSPVHDG 83          
BLAST of mRNA_Ecto-sp13_S_contig6547.17363.1 vs. uniprot
Match: A0A7S3HMC5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HMC5_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 2.240e-9
Identity = 27/46 (58.70%), Postives = 34/46 (73.91%), Query Frame = 0
Query:    1 MFEKFGVPAEFMSKDAVLACFSLGRTTASLVDVGGDSAVVTPVYDG 46
            MFEK+ VPA F+SKDAVLA ++ G+T   ++DVG    VVTPV DG
Sbjct:   54 MFEKYSVPAFFLSKDAVLASYACGKTGGLVIDVGASGTVVTPVQDG 99          
BLAST of mRNA_Ecto-sp13_S_contig6547.17363.1 vs. uniprot
Match: B8CAA7_THAPS (Actin related protein centractin-like protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CAA7_THAPS)

HSP 1 Score: 60.1 bits (144), Expect = 2.470e-9
Identity = 26/46 (56.52%), Postives = 36/46 (78.26%), Query Frame = 0
Query:    1 MFEKFGVPAEFMSKDAVLACFSLGRTTASLVDVGGDSAVVTPVYDG 46
            +FE   +PA F  +DAV AC+++GRTTA++VDVG  S +VTPVY+G
Sbjct:   75 LFETHNLPATFFLRDAVAACYAVGRTTATVVDVGYSSTMVTPVYEG 120          
BLAST of mRNA_Ecto-sp13_S_contig6547.17363.1 vs. uniprot
Match: A0A2H2ICF7_CAEJA (Uncharacterized protein n=1 Tax=Caenorhabditis japonica TaxID=281687 RepID=A0A2H2ICF7_CAEJA)

HSP 1 Score: 58.5 bits (140), Expect = 8.770e-9
Identity = 27/46 (58.70%), Postives = 33/46 (71.74%), Query Frame = 0
Query:    1 MFEKFGVPAEFMSKDAVLACFSLGRTTASLVDVGGDSAVVTPVYDG 46
            MFEKF VPA ++SK+AVL+CF+ GRT   +VD G     V PVYDG
Sbjct:  146 MFEKFQVPAYYLSKNAVLSCFAQGRTHGLMVDSGATQTSVVPVYDG 191          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6547.17363.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHJ0_ECTSI2.890e-2393.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LHI8_ECTSI1.860e-2197.83Protein binding protein, putative n=2 Tax=Ectocarp... [more]
A0A6H5KHN4_9PHAE5.000e-1884.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHJ1_ECTSI3.310e-1488.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z589_9STRA6.010e-1169.57Actin family n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A7S3UN21_HETAK2.290e-1064.44Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S0VUY7_9CRYP2.010e-960.87Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A7S3HMC5_9STRA2.240e-958.70Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
B8CAA7_THAPS2.470e-956.52Actin related protein centractin-like protein n=1 ... [more]
A0A2H2ICF7_CAEJA8.770e-958.70Uncharacterized protein n=1 Tax=Caenorhabditis jap... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004000Actin familyPFAMPF00022Actincoord: 1..46
e-value: 1.3E-12
score: 47.1
NoneNo IPR availableGENE3D3.30.420.40coord: 18..46
e-value: 6.1E-13
score: 50.4
NoneNo IPR availableGENE3D3.30.420.40coord: 1..17
e-value: 6.1E-13
score: 50.4
NoneNo IPR availableSUPERFAMILY53067Actin-like ATPase domaincoord: 1..30

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6547contigEcto-sp13_S_contig6547:2207..2347 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6547.17363.1mRNA_Ecto-sp13_S_contig6547.17363.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6547 2207..2359 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6547.17363.1 ID=prot_Ecto-sp13_S_contig6547.17363.1|Name=mRNA_Ecto-sp13_S_contig6547.17363.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=47bp
MFEKFGVPAEFMSKDAVLACFSLGRTTASLVDVGGDSAVVTPVYDG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004000Actin