prot_Ecto-sp13_S_contig652.17327.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig652.17327.1
Unique Nameprot_Ecto-sp13_S_contig652.17327.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length163
Homology
BLAST of mRNA_Ecto-sp13_S_contig652.17327.1 vs. uniprot
Match: D8LLC4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLC4_ECTSI)

HSP 1 Score: 263 bits (673), Expect = 3.600e-81
Identity = 134/161 (83.23%), Postives = 136/161 (84.47%), Query Frame = 0
Query:    3 EVYRACLDVVPHKSFTFAKIWLMLAKFEVRHKDLQAARKVLGQAIGMCPKEKLFKGYVQLERDLGEIDRCRKVYRRCLEAFPSDCGVWAQFAALEGSVGETERSRAVFELAIRQPVLDMPETLWKAYIDFEVGMGVGPDGEHTGQLFERLLERTQHVKVCV 163
            EVYRACLDVVPHKSFTFAKIWLMLAKFEVRHKDLQAARKVLGQAIGMCPKEKLFKGYVQLERDLGEIDRCRKVY +CLEAFPSDCGVWAQFAALEGSVGETERSRAVFELAIRQPVLDMPETLWK                       RLLERTQHVKV +
Sbjct:  385 EVYRACLDVVPHKSFTFAKIWLMLAKFEVRHKDLQAARKVLGQAIGMCPKEKLFKGYVQLERDLGEIDRCRKVYSKCLEAFPSDCGVWAQFAALEGSVGETERSRAVFELAIRQPVLDMPETLWKXXXXXXXXXXXXXXXXXXXX---RLLERTQHVKVWI 542          
BLAST of mRNA_Ecto-sp13_S_contig652.17327.1 vs. uniprot
Match: A0A1B0FNJ0_GLOMM (Uncharacterized protein n=1 Tax=Glossina morsitans morsitans TaxID=37546 RepID=A0A1B0FNJ0_GLOMM)

HSP 1 Score: 211 bits (538), Expect = 4.780e-65
Identity = 98/161 (60.87%), Postives = 124/161 (77.02%), Query Frame = 0
Query:    3 EVYRACLDVVPHKSFTFAKIWLMLAKFEVRHKDLQAARKVLGQAIGMCPKEKLFKGYVQLERDLGEIDRCRKVYRRCLEAFPSDCGVWAQFAALEGSVGETERSRAVFELAIRQPVLDMPETLWKAYIDFEVGMGVGPDGEHTGQLFERLLERTQHVKVCV 163
            ++YR CL+++PHK FTF+KIWL+ A+FE+R KDL  ARK LG AIGMCP++KLF+GY++LE  L E DRCR +Y + LE  P +C  W +FA LE  +G+TERSR ++ELAI+QP LDMPE LWKAYIDFEV  G   + E   QL+ERLLERTQHVKV +
Sbjct:   63 QIYRTCLELIPHKKFTFSKIWLLYAQFEIRCKDLNKARKTLGMAIGMCPRDKLFRGYIELEIQLREFDRCRLLYEKFLEYGPENCATWMKFAELENLLGDTERSRGIYELAIQQPRLDMPELLWKAYIDFEVSQG---ESELARQLYERLLERTQHVKVWI 220          
BLAST of mRNA_Ecto-sp13_S_contig652.17327.1 vs. uniprot
Match: A0A2R5GAY3_9STRA (Pre-mRNA-splicing factor clf1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GAY3_9STRA)

HSP 1 Score: 212 bits (539), Expect = 5.560e-62
Identity = 98/160 (61.25%), Postives = 123/160 (76.88%), Query Frame = 0
Query:    4 VYRACLDVVPHKSFTFAKIWLMLAKFEVRHKDLQAARKVLGQAIGMCPKEKLFKGYVQLERDLGEIDRCRKVYRRCLEAFPSDCGVWAQFAALEGSVGETERSRAVFELAIRQPVLDMPETLWKAYIDFEVGMGVGPDGEHTGQLFERLLERTQHVKVCV 163
            VYR CLD +PHK FTF+KIW++ A+ E+R KDL AARK+LG+AIG CP++K+FK Y+ LE  LG +DRCR +Y + LE  P +C VW ++AALE SVGET RSRA+FELAI QPVLDMPETLWK YIDFE+ +       +  +L+ERLLERT HVKV +
Sbjct:  417 VYRRCLDCIPHKIFTFSKIWILAAQLEIRDKDLTAARKLLGEAIGRCPRDKIFKMYLNLELQLGNVDRCRSIYEKYLEFAPQNCLVWERYAALEHSVGETRRSRAIFELAINQPVLDMPETLWKRYIDFEIKIDTTKSRANARKLYERLLERTDHVKVWI 576          
BLAST of mRNA_Ecto-sp13_S_contig652.17327.1 vs. uniprot
Match: A0A834FKI2_ORYME (Crooked neck-like protein 1 n=3 Tax=Ovalentaria TaxID=1489908 RepID=A0A834FKI2_ORYME)

HSP 1 Score: 209 bits (533), Expect = 1.440e-61
Identity = 99/161 (61.49%), Postives = 124/161 (77.02%), Query Frame = 0
Query:    3 EVYRACLDVVPHKSFTFAKIWLMLAKFEVRHKDLQAARKVLGQAIGMCPKEKLFKGYVQLERDLGEIDRCRKVYRRCLEAFPSDCGVWAQFAALEGSVGETERSRAVFELAIRQPVLDMPETLWKAYIDFEVGMGVGPDGEHTGQLFERLLERTQHVKVCV 163
            +VY+ACLD++PHK FTFAKIWL+ A+FE+R K LQAARKV+G AIG CPK KL KGY++LE  L E DRCRK+Y + LE  P +C  W +FA LE  +G+ ERSRA+FELAI QP LDMPE LWK+YIDFE+      + E+T  L++RLL+RTQHVKV +
Sbjct:  394 QVYQACLDLIPHKKFTFAKIWLLFAQFEIRQKSLQAARKVMGTAIGKCPKNKLLKGYIELELQLREFDRCRKLYEKYLEFSPENCTTWIKFAELETILGDVERSRAIFELAIGQPRLDMPEVLWKSYIDFEIEQ---EEFENTRNLYKRLLQRTQHVKVWI 551          
BLAST of mRNA_Ecto-sp13_S_contig652.17327.1 vs. uniprot
Match: A0A1B0FPF4_GLOMM (Uncharacterized protein n=9 Tax=Glossina TaxID=7393 RepID=A0A1B0FPF4_GLOMM)

HSP 1 Score: 210 bits (535), Expect = 1.480e-61
Identity = 98/161 (60.87%), Postives = 124/161 (77.02%), Query Frame = 0
Query:    3 EVYRACLDVVPHKSFTFAKIWLMLAKFEVRHKDLQAARKVLGQAIGMCPKEKLFKGYVQLERDLGEIDRCRKVYRRCLEAFPSDCGVWAQFAALEGSVGETERSRAVFELAIRQPVLDMPETLWKAYIDFEVGMGVGPDGEHTGQLFERLLERTQHVKVCV 163
            ++YR CL+++PHK FTF+KIWL+ A+FE+R KDL  ARK LG AIGMCP++KLF+GY++LE  L E DRCR +Y + LE  P +C  W +FA LE  +G+TERSR ++ELAI+QP LDMPE LWKAYIDFEV  G   + E   QL+ERLLERTQHVKV +
Sbjct:  390 QIYRTCLELIPHKKFTFSKIWLLYAQFEIRCKDLNKARKTLGMAIGMCPRDKLFRGYIELEIQLREFDRCRLLYEKFLEYGPENCVTWMKFAELENLLGDTERSRGIYELAIQQPRLDMPELLWKAYIDFEVSQG---ESELARQLYERLLERTQHVKVWI 547          
BLAST of mRNA_Ecto-sp13_S_contig652.17327.1 vs. uniprot
Match: A0A3B3DWB2_ORYME (Crooked neck pre-mRNA splicing factor 1 n=1 Tax=Oryzias melastigma TaxID=30732 RepID=A0A3B3DWB2_ORYME)

HSP 1 Score: 209 bits (533), Expect = 7.080e-61
Identity = 99/161 (61.49%), Postives = 124/161 (77.02%), Query Frame = 0
Query:    3 EVYRACLDVVPHKSFTFAKIWLMLAKFEVRHKDLQAARKVLGQAIGMCPKEKLFKGYVQLERDLGEIDRCRKVYRRCLEAFPSDCGVWAQFAALEGSVGETERSRAVFELAIRQPVLDMPETLWKAYIDFEVGMGVGPDGEHTGQLFERLLERTQHVKVCV 163
            +VY+ACLD++PHK FTFAKIWL+ A+FE+R K LQAARKV+G AIG CPK KL KGY++LE  L E DRCRK+Y + LE  P +C  W +FA LE  +G+ ERSRA+FELAI QP LDMPE LWK+YIDFE+      + E+T  L++RLL+RTQHVKV +
Sbjct:  394 QVYQACLDLIPHKKFTFAKIWLLFAQFEIRQKSLQAARKVMGTAIGKCPKNKLLKGYIELELQLREFDRCRKLYEKYLEFSPENCTTWIKFAELETILGDVERSRAIFELAIGQPRLDMPEVLWKSYIDFEIEQ---EEFENTRNLYKRLLQRTQHVKVWI 551          
BLAST of mRNA_Ecto-sp13_S_contig652.17327.1 vs. uniprot
Match: A0A7S2FY15_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FY15_9STRA)

HSP 1 Score: 199 bits (505), Expect = 9.320e-61
Identity = 98/177 (55.37%), Postives = 123/177 (69.49%), Query Frame = 0
Query:    6 RACLDVVPHKSFTFAKIWLMLAKFEVRHKDLQAARKVLGQAIGMCPK---EKLFKGYVQLERDLGEIDRCRKVYRRCLEAFPSDCGVWAQFAALEGSVGETERSRAVFELAIRQPVLDMPETLWKAYIDFEV----------------GMGVGPDGEHTGQLFERLLERTQHVKVCV 163
            + CL V+PH+ F+F KIW+M A FEVR +D+ AARKV+GQAIG C K   EK FK Y+ LER LGE+DRCR +Y + LEA P++C  W +FAALE ++GET RSRAVFE+A+ QPVLDMPE LWKAYIDFE+                G   G  G+   +L+ RLL+RT+HVKV V
Sbjct:    1 KKCLAVIPHEEFSFTKIWVMYAHFEVRQRDVTAARKVMGQAIGRCAKLGKEKPFKEYIHLERQLGEVDRCRTLYTKYLEAVPTNCAAWGRFAALESALGETARSRAVFEIAVNQPVLDMPEALWKAYIDFEIEQAKAIINGEADEDEEGEAPGEPGDRVRELYNRLLDRTKHVKVWV 177          
BLAST of mRNA_Ecto-sp13_S_contig652.17327.1 vs. uniprot
Match: A0A3S2LKX8_ORYJA (Uncharacterized protein n=1 Tax=Oryzias javanicus TaxID=123683 RepID=A0A3S2LKX8_ORYJA)

HSP 1 Score: 209 bits (531), Expect = 1.340e-60
Identity = 98/161 (60.87%), Postives = 125/161 (77.64%), Query Frame = 0
Query:    3 EVYRACLDVVPHKSFTFAKIWLMLAKFEVRHKDLQAARKVLGQAIGMCPKEKLFKGYVQLERDLGEIDRCRKVYRRCLEAFPSDCGVWAQFAALEGSVGETERSRAVFELAIRQPVLDMPETLWKAYIDFEVGMGVGPDGEHTGQLFERLLERTQHVKVCV 163
            +VY+ACLD++PHK FTFAKIWL+ A+FE+R K+LQAARK++G AIG CPK KL KGY++LE  L E DRCRK+Y + LE  P +C  W +FA LE  +G+ ERSRA+FELAI QP LDMPE LWK+YIDFE+      + E+T  L++RLL+RTQHVKV +
Sbjct:  394 QVYQACLDLMPHKKFTFAKIWLLFAQFEIRQKNLQAARKIMGTAIGKCPKNKLLKGYIELELQLREFDRCRKLYEKYLEFSPENCTTWIKFAELETILGDVERSRAIFELAIGQPRLDMPEVLWKSYIDFEIEQ---EEFENTRNLYKRLLQRTQHVKVWI 551          
BLAST of mRNA_Ecto-sp13_S_contig652.17327.1 vs. uniprot
Match: A0A3B3IGK4_ORYLA (Crooked neck pre-mRNA splicing factor 1 n=8 Tax=Oryzias TaxID=8089 RepID=A0A3B3IGK4_ORYLA)

HSP 1 Score: 209 bits (531), Expect = 1.360e-60
Identity = 98/161 (60.87%), Postives = 125/161 (77.64%), Query Frame = 0
Query:    3 EVYRACLDVVPHKSFTFAKIWLMLAKFEVRHKDLQAARKVLGQAIGMCPKEKLFKGYVQLERDLGEIDRCRKVYRRCLEAFPSDCGVWAQFAALEGSVGETERSRAVFELAIRQPVLDMPETLWKAYIDFEVGMGVGPDGEHTGQLFERLLERTQHVKVCV 163
            +VY+ACLD++PHK FTFAKIWL+ A+FE+R K+LQAARK++G AIG CPK KL KGY++LE  L E DRCRK+Y + LE  P +C  W +FA LE  +G+ ERSRA+FELAI QP LDMPE LWK+YIDFE+      + E+T  L++RLL+RTQHVKV +
Sbjct:  394 QVYQACLDLMPHKKFTFAKIWLLFAQFEIRQKNLQAARKIMGTAIGKCPKNKLLKGYIELELQLREFDRCRKLYEKYLEFSPENCTTWIKFAELETILGDVERSRAIFELAIGQPRLDMPEVLWKSYIDFEIEQ---EEFENTRNLYKRLLQRTQHVKVWI 551          
BLAST of mRNA_Ecto-sp13_S_contig652.17327.1 vs. uniprot
Match: B3SCA0_TRIAD (Uncharacterized protein n=2 Tax=Trichoplax TaxID=10227 RepID=B3SCA0_TRIAD)

HSP 1 Score: 207 bits (527), Expect = 1.610e-60
Identity = 95/161 (59.01%), Postives = 124/161 (77.02%), Query Frame = 0
Query:    3 EVYRACLDVVPHKSFTFAKIWLMLAKFEVRHKDLQAARKVLGQAIGMCPKEKLFKGYVQLERDLGEIDRCRKVYRRCLEAFPSDCGVWAQFAALEGSVGETERSRAVFELAIRQPVLDMPETLWKAYIDFEVGMGVGPDGEHTGQLFERLLERTQHVKVCV 163
            EVY ACL+++PHK FTFAKIW+MLA FE+R KD  +ARK+LG AIG CPKEKL+K Y++LE  L E DRCR++Y + L+  PS C  W ++A LE  +G+ ER+RA+FELAI QP++DMPE LWK+YIDFE+G     + E+   L+E+LLERTQHVKV +
Sbjct:  389 EVYTACLNLIPHKKFTFAKIWIMLANFEIRQKDATSARKILGNAIGRCPKEKLYKSYIELELQLREFDRCRQLYEKFLQFNPSCCTSWVKYAELETILGDVERARAIFELAINQPIMDMPEVLWKSYIDFEIGQ---EEYENARSLYEKLLERTQHVKVWI 546          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig652.17327.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLC4_ECTSI3.600e-8183.23Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A1B0FNJ0_GLOMM4.780e-6560.87Uncharacterized protein n=1 Tax=Glossina morsitans... [more]
A0A2R5GAY3_9STRA5.560e-6261.25Pre-mRNA-splicing factor clf1 n=1 Tax=Hondaea ferm... [more]
A0A834FKI2_ORYME1.440e-6161.49Crooked neck-like protein 1 n=3 Tax=Ovalentaria Ta... [more]
A0A1B0FPF4_GLOMM1.480e-6160.87Uncharacterized protein n=9 Tax=Glossina TaxID=739... [more]
A0A3B3DWB2_ORYME7.080e-6161.49Crooked neck pre-mRNA splicing factor 1 n=1 Tax=Or... [more]
A0A7S2FY15_9STRA9.320e-6155.37Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A3S2LKX8_ORYJA1.340e-6060.87Uncharacterized protein n=1 Tax=Oryzias javanicus ... [more]
A0A3B3IGK4_ORYLA1.360e-6060.87Crooked neck pre-mRNA splicing factor 1 n=8 Tax=Or... [more]
B3SCA0_TRIAD1.610e-6059.01Uncharacterized protein n=2 Tax=Trichoplax TaxID=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003107HAT (Half-A-TPR) repeatSMARTSM00386hat_new_1coord: 67..99
e-value: 0.0069
score: 25.6
coord: 3..32
e-value: 150.0
score: 6.7
coord: 101..135
e-value: 0.0013
score: 28.1
coord: 34..65
e-value: 2.4
score: 17.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 2..160
e-value: 2.3E-29
score: 104.6
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 11..154
NoneNo IPR availablePANTHERPTHR11246:SF3CROOKED NECK-LIKE PROTEIN 1coord: 2..162
NoneNo IPR availablePANTHERPTHR11246PRE-MRNA SPLICING FACTORcoord: 2..162

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig652contigEcto-sp13_S_contig652:20885..22648 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig652.17327.1mRNA_Ecto-sp13_S_contig652.17327.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig652 20885..22648 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig652.17327.1 ID=prot_Ecto-sp13_S_contig652.17327.1|Name=mRNA_Ecto-sp13_S_contig652.17327.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=163bp
RSEVYRACLDVVPHKSFTFAKIWLMLAKFEVRHKDLQAARKVLGQAIGMC
PKEKLFKGYVQLERDLGEIDRCRKVYRRCLEAFPSDCGVWAQFAALEGSV
GETERSRAVFELAIRQPVLDMPETLWKAYIDFEVGMGVGPDGEHTGQLFE
RLLERTQHVKVCV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003107HAT
IPR011990TPR-like_helical_dom_sf