prot_Ecto-sp13_S_contig6516.17318.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6516.17318.1
Unique Nameprot_Ecto-sp13_S_contig6516.17318.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length494
Homology
BLAST of mRNA_Ecto-sp13_S_contig6516.17318.1 vs. uniprot
Match: D7G9C3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9C3_ECTSI)

HSP 1 Score: 791 bits (2043), Expect = 1.140e-272
Identity = 410/501 (81.84%), Postives = 423/501 (84.43%), Query Frame = 0
Query:    1 ISLSNPLTIPVSFRVETSGPFVINPSPPKKRLNSGKTYFETQVRGGRGGGDAARCQGRRRQQSQLADNNSQATRS------GDGASCAYIGQRTASMMDTQDHNQHQKQHHPECQHRRTKDLISLLPGQNLQLEVVFLPSRASAEMSECLKSSFSPGTEDIPRLVLRTTGELTIAFCTGHVQRIFLRGEVLRPMITVAPATHSFGTIHTERRGNATLFLGNPTFADAEWSLVHIPTPPSKKRLIHNNNAAKATAAGTTPTSNPARAASGAYAKGRHTGKPGGTNGRGSHGRGPAAGLFNPLVVDDPSVFVFDEEGGVLTGVKLPLKSSAACLPEDWNRFENACWPQQRSRVTWGGVTDCCSVYYPKNKISHHECFPGRSVQGSPRRSVRKDTRPMNNVFLVPG--ARPAMPAAVVWRDEPHGQRQVVGPTLNLEIFLTRKEETAEGYRAPRPLEVVFVPKHNVLYRSRFRLTVKGGESAEVVLEGCGTYREDFRPGKLPRV 493
            ISLSNPLTIPVSFRVETSGPFVIN  PPKKRLNSGKT FETQ+ G        RCQGRRRQQSQLADN++QA RS      GDGASCA  GQRTAS+MDTQDHNQHQKQH PE QHRRT DLISLLPGQN QLEVVFLP RASA+M ECLKSSFSPGTE IPRLVLRTTGELTIAFCTGHVQRIFLRGEVLRPMITVAPATHSFGTIHTERRGNATLFLGNPTFADAEWSLVHIP PP KKRLIH+NNA KATA GTTPTSNPARAASGAY KGRHTGKPGGT+G GS G    AGLFNPLVVDDPSVFVF EEGGVLTGVKLPLKSSAACLPEDWNRFENACWPQQ SRVTWGGV DCCSV+YP  ++    C         P+ S     R + N     G  ARPAM AAVVWR+EPHGQRQVVGPTL LE FLTRKEET EGYRAPRPLEVVF PKHNVLYRSRFRLTVKGGESAEVVLEGCGTYRED RPGKLPRV
Sbjct:  925 ISLSNPLTIPVSFRVETSGPFVINRCPPKKRLNSGKTSFETQLSGXXXXXXXXRCQGRRRQQSQLADNHNQAMRSPKRRRAGDGASCANRGQRTASVMDTQDHNQHQKQHRPERQHRRTNDLISLLPGQNRQLEVVFLPLRASAKMLECLKSSFSPGTEGIPRLVLRTTGELTIAFCTGHVQRIFLRGEVLRPMITVAPATHSFGTIHTERRGNATLFLGNPTFADAEWSLVHIPAPPPKKRLIHSNNADKATATGTTPTSNPARAASGAYVKGRHTGKPGGTDGSGSSGCSSVAGLFNPLVVDDPSVFVFGEEGGVLTGVKLPLKSSAACLPEDWNRFENACWPQQPSRVTWGGVIDCCSVHYPAQELGRRSC-QNHPYGPPPQGSFHSQRRELPNTLSPAGTGARPAMSAAVVWRNEPHGQRQVVGPTLKLETFLTRKEETTEGYRAPRPLEVVFAPKHNVLYRSRFRLTVKGGESAEVVLEGCGTYREDSRPGKLPRV 1424          
BLAST of mRNA_Ecto-sp13_S_contig6516.17318.1 vs. uniprot
Match: A0A7S2V4H4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4H4_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 1.050e-17
Identity = 62/186 (33.33%), Postives = 85/186 (45.70%), Query Frame = 0
Query:  162 TTGELTIAFCTGHVQRIFLRGEVLRPMITVAPATHSFGTIHTERRGNATLFLGNPTFADAEWSLVHIPTPPSKKRLIHNNNAAKATAAGTTPTSNPARAASGAYAKGRHTGKPGGTNGRGSHGRGPAAGLFNPLVVDDPSVFVFDEEGGVLTGVKLPLKSSAACLPEDWNRFENACWPQQRSRVTW 347
            T G LT+ F TGH Q + L G +LRPMI  +P  + FG +         + L NPT  +A WSL H+ +  S K +  +     +   G      P+ A   A A+                    A     P   DDPSVF F +E GVL+G  +PLK++  CLP D NR  +A + Q  + V W
Sbjct:    1 TKGTLTVQFSTGHQQTLQLVGNLLRPMIVASPPKYYFGVVRVGAVQKIDIALSNPTEVEAHWSLSHVRSLTSGKGMRASRERPVSKLGG-----KPSAALRAALAE------------------EDAIIEAPPSSHDDPSVFQFSQEEGVLSGPTMPLKATGVCLPTDMNRTTDAVFNQTITTVKW 163          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6516.17318.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G9C3_ECTSI1.140e-27281.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2V4H4_9STRA1.050e-1733.33Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033304Deleted in lung and esophageal cancer protein 1PANTHERPTHR46348FAMILY NOT NAMEDcoord: 2..484

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6516contigEcto-sp13_S_contig6516:2538..5808 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6516.17318.1mRNA_Ecto-sp13_S_contig6516.17318.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6516 2538..5808 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6516.17318.1 ID=prot_Ecto-sp13_S_contig6516.17318.1|Name=mRNA_Ecto-sp13_S_contig6516.17318.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=494bp
ISLSNPLTIPVSFRVETSGPFVINPSPPKKRLNSGKTYFETQVRGGRGGG
DAARCQGRRRQQSQLADNNSQATRSGDGASCAYIGQRTASMMDTQDHNQH
QKQHHPECQHRRTKDLISLLPGQNLQLEVVFLPSRASAEMSECLKSSFSP
GTEDIPRLVLRTTGELTIAFCTGHVQRIFLRGEVLRPMITVAPATHSFGT
IHTERRGNATLFLGNPTFADAEWSLVHIPTPPSKKRLIHNNNAAKATAAG
TTPTSNPARAASGAYAKGRHTGKPGGTNGRGSHGRGPAAGLFNPLVVDDP
SVFVFDEEGGVLTGVKLPLKSSAACLPEDWNRFENACWPQQRSRVTWGGV
TDCCSVYYPKNKISHHECFPGRSVQGSPRRSVRKDTRPMNNVFLVPGARP
AMPAAVVWRDEPHGQRQVVGPTLNLEIFLTRKEETAEGYRAPRPLEVVFV
PKHNVLYRSRFRLTVKGGESAEVVLEGCGTYREDFRPGKLPRV*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033304DLEC1