prot_Ecto-sp13_S_contig6512.17313.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6512.17313.1
Unique Nameprot_Ecto-sp13_S_contig6512.17313.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length276
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6512.17313.1 vs. uniprot
Match: A0A6H5L089_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L089_9PHAE)

HSP 1 Score: 269 bits (688), Expect = 1.370e-82
Identity = 141/214 (65.89%), Postives = 145/214 (67.76%), Query Frame = 0 
Query:  124 RGSPCLVEAIVKADGVGSMTMRHLAAKIFAEEVGCDWLIPSQWGMPAAGGGSGASVYCHSAATYEEQRRGFGNATKDEAESMVHRCSVVNWPEYFNLNTSSVEPPTNCAFRVVEA-------------------------------------------------------------DTSSNHDLEMALKEIDANGFDNIEWDRLKIVLRQPHAS 276
            +GSPCLV+A+VKADGVGSMTMRHLAAKIFAEEVGCDWL PSQWGMPAAG GSGASVYCHSAATYEEQRRGFGNATK EAESMVHRCSVVNWPEYFNLN SSVEPP NCA RVVE                                                              DTSSNHDLEMALKEIDANGFDN+ WDRLKIVLRQPHAS
Sbjct:   15 QGSPCLVDAVVKADGVGSMTMRHLAAKIFAEEVGCDWLTPSQWGMPAAGDGSGASVYCHSAATYEEQRRGFGNATKAEAESMVHRCSVVNWPEYFNLNASSVEPPANCALRVVEGQHGSGEGGSFSAAPIFEVARRRLGTRQYHSGFNQNRSSFYPNNVHENAMLAGLCAYFVVKVDTSSNHDLEMALKEIDANGFDNLGWDRLKIVLRQPHAS 228
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BLAST of mRNA_Ecto-sp13_S_contig6512.17313.1 vs. uniprot
Match: D7FRT1_ECTSI (Long-chain acyl-CoA synthetase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRT1_ECTSI)

HSP 1 Score: 258 bits (659), Expect = 8.320e-75
Identity = 122/135 (90.37%), Postives = 124/135 (91.85%), Query Frame = 0 
Query:  142 MTMRHLAAKIFAEEVGCDWLIPSQWGMPAAGGGSGASVYCHSAATYEEQRRGFGNATKDEAESMVHRCSVVNWPEYFNLNTSSVEPPTNCAFRVVEADTSSNHDLEMALKEIDANGFDNIEWDRLKIVLRQPHAS 276
            MTMRHLAAKIFAEEVGCDWL PSQWGMP AG GSGASVYCHSAATY+EQRRGFGNATKDEAE MVHRCSVVNWPEYFNLN SSVE P NC FRVVEADTS NHDLEMALKE DANGFDN+ WDRLKIVLRQPHAS
Sbjct:    1 MTMRHLAAKIFAEEVGCDWLTPSQWGMPVAGDGSGASVYCHSAATYDEQRRGFGNATKDEAEIMVHRCSVVNWPEYFNLNASSVELPANCTFRVVEADTSRNHDLEMALKETDANGFDNLGWDRLKIVLRQPHAS 135
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6512.17313.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L089_9PHAE1.370e-8265.89Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D7FRT1_ECTSI8.320e-7590.37Long-chain acyl-CoA synthetase n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6512contigEcto-sp13_S_contig6512:3021..4559 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6512.17313.1mRNA_Ecto-sp13_S_contig6512.17313.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6512 3021..4559 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6512.17313.1 ID=prot_Ecto-sp13_S_contig6512.17313.1|Name=mRNA_Ecto-sp13_S_contig6512.17313.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=276bp
TAHCLLQVTPCLPRVTSTATAAIAIEVKAEQQKRTLVPPQACQEFSHQQA
IAASDNDNVKNRSTRAAPVPLPSSPSPSSLDSYWSASDCMDVWASWTATL
PASLQPSYANRELLKERAADMRARGSPCLVEAIVKADGVGSMTMRHLAAK
IFAEEVGCDWLIPSQWGMPAAGGGSGASVYCHSAATYEEQRRGFGNATKD
EAESMVHRCSVVNWPEYFNLNTSSVEPPTNCAFRVVEADTSSNHDLEMAL
KEIDANGFDNIEWDRLKIVLRQPHAS
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