prot_Ecto-sp13_S_contig64479.17215.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig64479.17215.1
Unique Nameprot_Ecto-sp13_S_contig64479.17215.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length57
Homology
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BLAST of mRNA_Ecto-sp13_S_contig64479.17215.1 vs. uniprot
Match: A0A6H5K0G0_9PHAE (Nucleotid_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0G0_9PHAE)

HSP 1 Score: 115 bits (289), Expect = 9.520e-29
Identity = 52/54 (96.30%), Postives = 53/54 (98.15%), Query Frame = 0 
Query:    1 QWGDEIFKHETVVRPDILLSIMAQGYKVLWTDVDIVWLGNPLPLLPDTHKNATA 54
            QWGDEIFKHETVVRPDILLSIMAQGYKVLWTDVDIVWLGNPLPLLPDT KN+TA
Sbjct: 1288 QWGDEIFKHETVVRPDILLSIMAQGYKVLWTDVDIVWLGNPLPLLPDTQKNSTA 1341
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BLAST of mRNA_Ecto-sp13_S_contig64479.17215.1 vs. uniprot
Match: D8LU02_ECTSI (Xylosyltransferase, family GT77 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU02_ECTSI)

HSP 1 Score: 79.0 bits (193), Expect = 9.080e-16
Identity = 35/53 (66.04%), Postives = 40/53 (75.47%), Query Frame = 0 
Query:    1 QWGDEIFKHETVVRPDILLSIMAQGYKVLWTDVDIVWLGNPLPLLPDTHKNAT 53
            QWGD IFK +TV RPDILL I+ QGYK L+TDVDI WLGN L LLP++    T
Sbjct:  348 QWGDNIFKQQTVARPDILLPILRQGYKALYTDVDIFWLGNVLSLLPNSRVTQT 400
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BLAST of mRNA_Ecto-sp13_S_contig64479.17215.1 vs. uniprot
Match: A0A6P4CS42_ARADU (Glycosyltransferase n=8 Tax=Arachis TaxID=3817 RepID=A0A6P4CS42_ARADU)

HSP 1 Score: 47.8 bits (112), Expect = 8.960e-5
Identity = 22/49 (44.90%), Postives = 31/49 (63.27%), Query Frame = 0 
Query:    1 QWGDEIFKHETVVRPDILLSIMAQGYKVLWTDVDIVWLGNPLPLLPDTH 49
            ++G + F + T  RP  LL I+  GY V++ DVD+VWLG+PL  L   H
Sbjct:  156 KFGSKGFFNFTARRPSHLLKILELGYSVMYNDVDMVWLGDPLLQLEGNH 204
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig64479.17215.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K0G0_9PHAE9.520e-2996.30Nucleotid_trans domain-containing protein n=1 Tax=... [more]
D8LU02_ECTSI9.080e-1666.04Xylosyltransferase, family GT77 n=1 Tax=Ectocarpus... [more]
A0A6P4CS42_ARADU8.960e-544.90Glycosyltransferase n=8 Tax=Arachis TaxID=3817 Rep... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005069Nucleotide-diphospho-sugar transferasePFAMPF03407Nucleotid_transcoord: 2..48
e-value: 3.9E-9
score: 36.8
NoneNo IPR availablePANTHERPTHR47032FAMILY NOT NAMEDcoord: 2..49

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig64479contigEcto-sp13_S_contig64479:6..176 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig64479.17215.1mRNA_Ecto-sp13_S_contig64479.17215.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig64479 6..176 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig64479.17215.1 ID=prot_Ecto-sp13_S_contig64479.17215.1|Name=mRNA_Ecto-sp13_S_contig64479.17215.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=57bp
QWGDEIFKHETVVRPDILLSIMAQGYKVLWTDVDIVWLGNPLPLLPDTHK
NATAVS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005069Nucl-diP-sugar_transferase