prot_Ecto-sp13_S_contig6417.17179.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6417.17179.1
Unique Nameprot_Ecto-sp13_S_contig6417.17179.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length185
Homology
BLAST of mRNA_Ecto-sp13_S_contig6417.17179.1 vs. uniprot
Match: D8LEV0_ECTSI (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEV0_ECTSI)

HSP 1 Score: 349 bits (896), Expect = 1.760e-121
Identity = 181/184 (98.37%), Postives = 183/184 (99.46%), Query Frame = 0
Query:    1 MMRKTVLLLLCVLVSVAGFVPAPSICRNARSAVGTPARTSTSSLSMGFDFKGTLEKMSDTRYARVRHILVEEKGEEGRSKLEEAKEEIAGDLDKFSEVAEKMSTCTSAPRGGRLKLLARGETVPEFDDIAFNGELGVVHGPVETQFGTHLIYVESCNKPQNTWKMLFDDIVDKVSGKEEEGDKK 184
            MMR+T+LLLLCVLVSVAGFVPAPSICRNARSAVGTPARTSTSSLSMGFDFKGTLEKMSD RYARVRHILVEEKGEEGRSKLEEAKEEIAGDLDKFSEVAEKMSTCTSAPRGGRLKLLARGETVPEFDDIAFNGELGVVHGPVETQFGTHLIYVESCNKPQNTWKMLFDDIVDKVSGKEEEGDKK
Sbjct:    1 MMRETILLLLCVLVSVAGFVPAPSICRNARSAVGTPARTSTSSLSMGFDFKGTLEKMSDPRYARVRHILVEEKGEEGRSKLEEAKEEIAGDLDKFSEVAEKMSTCTSAPRGGRLKLLARGETVPEFDDIAFNGELGVVHGPVETQFGTHLIYVESCNKPQNTWKMLFDDIVDKVSGKEEEGDKK 184          
BLAST of mRNA_Ecto-sp13_S_contig6417.17179.1 vs. uniprot
Match: A0A6U8PGI0_EMIHU (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A6U8PGI0_EMIHU)

HSP 1 Score: 97.8 bits (242), Expect = 1.830e-22
Identity = 49/109 (44.95%), Postives = 65/109 (59.63%), Query Frame = 0
Query:   54 LEKMSDTRYARVRHILVEEKGEEGRSKLEEAKEEIAGDLDKFSEVAEKMSTCTSAPRGGRLKLLARGETVPEFDDIAFNGELGVVHGPVETQFGTHLIYVESCNKPQNT 162
            +++M+D R  R  HI++    +     L E K EI  D  KF E A   S C SAPRGG L  + RG+  PEFD++ F  E G V+GP++TQFG HLIY+ SC +P  T
Sbjct:   46 MKQMTDQRVGRASHIMLRPSDDAAAELLREWKAEIGDDEAKFQERARASSECRSAPRGGDLGFVTRGKLSPEFDEVIFEEEPGFVYGPLQTQFGYHLIYLHSCREPSGT 154          
BLAST of mRNA_Ecto-sp13_S_contig6417.17179.1 vs. uniprot
Match: A0A7S1Y1S1_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y1S1_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 2.520e-19
Identity = 55/116 (47.41%), Postives = 72/116 (62.07%), Query Frame = 0
Query:   39 TSTSSLSMGF-DFKGTLEKMSDTRYARVRHILVEEKGEEGRSKLEEAKEEIAGDLDKFSEVAEKMSTCTSAPRGGRLKLLARGETVPEFDDIAFNGELGVVHGPVETQFGTHLIYV 153
            ++T+ L  GF D  GT  K   T+ A   HIL++  G E  +KLEE K EI     KF+E A + S+C SA +GG L     G+ V EFD + FN ++GVVHGP++TQFG HLIYV
Sbjct:   23 STTTKLFGGFMDEVGTFFKRF-TQKASASHILIKG-GPEAANKLEELKVEIDNSPVKFAEAASRFSSCPSARKGGELGEFGPGQMVKEFDQVVFNDDVGVVHGPIKTQFGYHLIYV 136          
BLAST of mRNA_Ecto-sp13_S_contig6417.17179.1 vs. uniprot
Match: A0A7S2HC75_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HC75_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 7.040e-19
Identity = 43/92 (46.74%), Postives = 56/92 (60.87%), Query Frame = 0
Query:   63 ARVRHILVEEKGEEGRSKLEEAKEEIAGDLDKFSEVAEKMSTCTSAPRGGRLKLLARGETVPEFDDIAFNGELGVVHGPVETQFGTHLIYVE 154
            A   HIL++    E   K++  KEEI  D+ KF+E A + S C S  +GG L    R   VPEFD + FN E+GVVHGP+ T FG HLI++E
Sbjct:   18 AEASHILIKGTDAEAEQKIKAIKEEIGNDVTKFAEAATQHSDCPSGRQGGSLGEFGRYSMVPEFDKVVFNEEVGVVHGPIRTSFGFHLIFIE 109          
BLAST of mRNA_Ecto-sp13_S_contig6417.17179.1 vs. uniprot
Match: A0A2E3DHP9_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E3DHP9_9PLAN)

HSP 1 Score: 87.4 bits (215), Expect = 2.960e-18
Identity = 50/95 (52.63%), Postives = 59/95 (62.11%), Query Frame = 0
Query:   63 ARVRHILVEEKGEEGRSKLEEAKEEIAGDLDKFSEVAEKMSTCTSAPRGGRLKLLARGETVPEFDDIAFNGELGVVHGPVETQFGTHLIYVESCN 157
            A  RHILVE K        EE K +IAG LD F+  A + S C S+ +GG L    RG+ VPEFD + F  E+GVVHGPVETQFG HLI + S N
Sbjct:   97 AAARHILVETK-----EACEELKSKIAGGLD-FAAAAAEHSKCPSSSQGGELGTFGRGQMVPEFDKVVFEEEVGVVHGPVETQFGFHLIEITSRN 185          
BLAST of mRNA_Ecto-sp13_S_contig6417.17179.1 vs. uniprot
Match: A0A7R9W6N6_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W6N6_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 3.850e-18
Identity = 44/98 (44.90%), Postives = 58/98 (59.18%), Query Frame = 0
Query:   60 TRYARVRHILVEEKGEEGRSKLEEAKEEIAGDLDKFSEVAEKMSTCTSAPRGGRLKLLARGETVPEFDDIAFNGELGVVHGPVETQFGTHLIYVESCN 157
            T  A   HIL++      + K+++ K+EI  D DKF+E+A   S C S  +GG L    R   VPEFD + FN E+GVVHGP+ET FG HLI +   N
Sbjct:   71 TMRAEASHILIKGTDSGAKRKIDDIKKEIGNDSDKFAELAALTSDCPSGQQGGSLGEFGRYSMVPEFDKVVFNEEVGVVHGPIETSFGYHLILIHRRN 168          
BLAST of mRNA_Ecto-sp13_S_contig6417.17179.1 vs. uniprot
Match: A0A2D8J063_9ALTE (Peptidylprolyl isomerase n=2 Tax=Alteromonadaceae TaxID=72275 RepID=A0A2D8J063_9ALTE)

HSP 1 Score: 83.6 bits (205), Expect = 8.590e-18
Identity = 46/93 (49.46%), Postives = 59/93 (63.44%), Query Frame = 0
Query:   63 ARVRHILVEEKGEEGRSKLEEAKEEIAGDLDKFSEVAEKMSTCTSAPRGGRLKLLARGETVPEFDDIAFNGELGVVHGPVETQFGTHLIYVES 155
            A  RHILV++K +      E  K+EI G  D F+ VA + STC S  +GG L    RG+ VPEFD + F+G+L  VHGPV+TQFG HL+ V S
Sbjct:    4 ASARHILVKDKAQ-----CENLKKEIEGGRD-FAAVAREHSTCPSGKQGGDLGEFGRGQMVPEFDQVVFSGDLNTVHGPVQTQFGYHLLEVTS 90          
BLAST of mRNA_Ecto-sp13_S_contig6417.17179.1 vs. uniprot
Match: S0JGD6_9FIRM (Peptidylprolyl isomerase n=1 Tax=Eubacterium sp. 14-2 TaxID=1235790 RepID=S0JGD6_9FIRM)

HSP 1 Score: 87.4 bits (215), Expect = 1.110e-17
Identity = 52/121 (42.98%), Postives = 72/121 (59.50%), Query Frame = 0
Query:   54 LEKMSDTRYARVRHILVEEKGEEGRSKLEEAKEEIAGDLDKFSEVAEKMSTCTSAPRGGRLKLLARGETVPEFDDIAFNGELGVVHGPVETQFGTHLIYVESCNKPQNTWKMLFDDIVDKV 174
            +E+  +    R RHILV+      R + E   +E+   LD F+E AEK STC S  +GG L    RG+ VPEF+  AF GE+G + GPVETQFG HLI VE  +K + + K  FD + +++
Sbjct:  107 MEQFQEKAQVRARHILVDT-----RQQAESVSQELEQGLD-FAEAAEKYSTCPSREKGGDLGYFTRGQMVPEFEKAAFEGEIGKLIGPVETQFGCHLILVE--DKKEGSVKP-FDQVQEQI 218          
BLAST of mRNA_Ecto-sp13_S_contig6417.17179.1 vs. uniprot
Match: UPI0012644084 (peptidylprolyl isomerase n=1 Tax=Sulfurimonas indica TaxID=2508707 RepID=UPI0012644084)

HSP 1 Score: 83.2 bits (204), Expect = 1.180e-17
Identity = 45/92 (48.91%), Postives = 59/92 (64.13%), Query Frame = 0
Query:   62 YARVRHILVEEKGEEGRSKLEEAKEEIAGDLDKFSEVAEKMSTCTSAPRGGRLKLLARGETVPEFDDIAFNGELGVVHGPVETQFGTHLIYV 153
            +A  RHILVE +     +K  E KEEI    D F E+A++ STC S+  GG L     G+ VPEFD   FNG++GVV+GP++TQFG HL+ V
Sbjct:    3 WATARHILVESE-----AKCNELKEEIENGAD-FGEIAKQYSTCPSSRNGGDLGQFGPGQMVPEFDKAVFNGDVGVVYGPIQTQFGYHLLEV 88          
BLAST of mRNA_Ecto-sp13_S_contig6417.17179.1 vs. uniprot
Match: A0A1W1BRN3_9ZZZZ (Peptidyl-prolyl cis-trans isomerase PpiC n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A1W1BRN3_9ZZZZ)

HSP 1 Score: 83.2 bits (204), Expect = 1.210e-17
Identity = 43/91 (47.25%), Postives = 57/91 (62.64%), Query Frame = 0
Query:   63 ARVRHILVEEKGEEGRSKLEEAKEEIAGDLDKFSEVAEKMSTCTSAPRGGRLKLLARGETVPEFDDIAFNGELGVVHGPVETQFGTHLIYV 153
            A  RHILV ++     SK  + KE+I      F EVA   S C S  +GG L + ++G+ VPEFD + FN E+GVVHGP++TQFG HLI +
Sbjct:    4 ASARHILVNDE-----SKCMDLKEQIVSGQKTFVEVARDQSLCPSGVKGGDLGIFSQGQMVPEFDKVVFNDEVGVVHGPIQTQFGYHLIEI 89          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6417.17179.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEV0_ECTSI1.760e-12198.37Peptidyl-prolyl cis-trans isomerase n=2 Tax=Ectoca... [more]
A0A6U8PGI0_EMIHU1.830e-2244.95Peptidyl-prolyl cis-trans isomerase n=2 Tax=Emilia... [more]
A0A7S1Y1S1_9STRA2.520e-1947.41Peptidyl-prolyl cis-trans isomerase n=1 Tax=Gramma... [more]
A0A7S2HC75_9STRA7.040e-1946.74Peptidyl-prolyl cis-trans isomerase n=1 Tax=Helico... [more]
A0A2E3DHP9_9PLAN2.960e-1852.63Uncharacterized protein n=1 Tax=Planctomycetaceae ... [more]
A0A7R9W6N6_9STRA3.850e-1844.90Peptidyl-prolyl cis-trans isomerase n=1 Tax=Pseudi... [more]
A0A2D8J063_9ALTE8.590e-1849.46Peptidylprolyl isomerase n=2 Tax=Alteromonadaceae ... [more]
S0JGD6_9FIRM1.110e-1742.98Peptidylprolyl isomerase n=1 Tax=Eubacterium sp. 1... [more]
UPI00126440841.180e-1748.91peptidylprolyl isomerase n=1 Tax=Sulfurimonas indi... [more]
A0A1W1BRN3_9ZZZZ1.210e-1747.25Peptidyl-prolyl cis-trans isomerase PpiC n=1 Tax=h... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.50.40coord: 49..154
e-value: 2.6E-22
score: 81.4
NoneNo IPR availablePANTHERPTHR43629:SF2RHODANESE-LIKE/PPIC DOMAIN-CONTAINING PROTEIN 12, CHLOROPLASTICcoord: 41..158
NoneNo IPR availablePANTHERPTHR43629FAMILY NOT NAMEDcoord: 41..158
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..184
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.86
NoneNo IPR availableSUPERFAMILY54534FKBP-likecoord: 61..154
NoneNo IPR availableTMHMMTMhelixcoord: 7..25
IPR000297Peptidyl-prolyl cis-trans isomerase, PpiC-typePFAMPF00639Rotamasecoord: 68..154
e-value: 2.3E-16
score: 60.5
IPR000297Peptidyl-prolyl cis-trans isomerase, PpiC-typePROSITEPS50198PPIC_PPIASE_2coord: 60..155
score: 21.619

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6417contigEcto-sp13_S_contig6417:530..2915 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6417.17179.1mRNA_Ecto-sp13_S_contig6417.17179.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6417 530..2915 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6417.17179.1 ID=prot_Ecto-sp13_S_contig6417.17179.1|Name=mRNA_Ecto-sp13_S_contig6417.17179.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=185bp
MMRKTVLLLLCVLVSVAGFVPAPSICRNARSAVGTPARTSTSSLSMGFDF
KGTLEKMSDTRYARVRHILVEEKGEEGRSKLEEAKEEIAGDLDKFSEVAE
KMSTCTSAPRGGRLKLLARGETVPEFDDIAFNGELGVVHGPVETQFGTHL
IYVESCNKPQNTWKMLFDDIVDKVSGKEEEGDKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000297PPIase_PpiC