mRNA_Ecto-sp13_S_contig6417.17179.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6417.17179.1 vs. uniprot
Match: D8LEV0_ECTSI (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEV0_ECTSI) HSP 1 Score: 349 bits (896), Expect = 1.760e-121 Identity = 181/184 (98.37%), Postives = 183/184 (99.46%), Query Frame = 1
Query: 1 MMRKTVLLLLCVLVSVAGFVPAPSICRNARSAVGTPARTSTSSLSMGFDFKGTLEKMSDTRYARVRHILVEEKGEEGRSKLEEAKEEIAGDLDKFSEVAEKMSTCTSAPRGGRLKLLARGETVPEFDDIAFNGELGVVHGPVETQFGTHLIYVESCNKPQNTWKMLFDDIVDKVSGKEEEGDKK 552
MMR+T+LLLLCVLVSVAGFVPAPSICRNARSAVGTPARTSTSSLSMGFDFKGTLEKMSD RYARVRHILVEEKGEEGRSKLEEAKEEIAGDLDKFSEVAEKMSTCTSAPRGGRLKLLARGETVPEFDDIAFNGELGVVHGPVETQFGTHLIYVESCNKPQNTWKMLFDDIVDKVSGKEEEGDKK
Sbjct: 1 MMRETILLLLCVLVSVAGFVPAPSICRNARSAVGTPARTSTSSLSMGFDFKGTLEKMSDPRYARVRHILVEEKGEEGRSKLEEAKEEIAGDLDKFSEVAEKMSTCTSAPRGGRLKLLARGETVPEFDDIAFNGELGVVHGPVETQFGTHLIYVESCNKPQNTWKMLFDDIVDKVSGKEEEGDKK 184
BLAST of mRNA_Ecto-sp13_S_contig6417.17179.1 vs. uniprot
Match: A0A6U8PGI0_EMIHU (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A6U8PGI0_EMIHU) HSP 1 Score: 97.8 bits (242), Expect = 1.830e-22 Identity = 49/109 (44.95%), Postives = 65/109 (59.63%), Query Frame = 1
Query: 160 LEKMSDTRYARVRHILVEEKGEEGRSKLEEAKEEIAGDLDKFSEVAEKMSTCTSAPRGGRLKLLARGETVPEFDDIAFNGELGVVHGPVETQFGTHLIYVESCNKPQNT 486
+++M+D R R HI++ + L E K EI D KF E A S C SAPRGG L + RG+ PEFD++ F E G V+GP++TQFG HLIY+ SC +P T
Sbjct: 46 MKQMTDQRVGRASHIMLRPSDDAAAELLREWKAEIGDDEAKFQERARASSECRSAPRGGDLGFVTRGKLSPEFDEVIFEEEPGFVYGPLQTQFGYHLIYLHSCREPSGT 154
BLAST of mRNA_Ecto-sp13_S_contig6417.17179.1 vs. uniprot
Match: A0A7S1Y1S1_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y1S1_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 2.520e-19 Identity = 55/116 (47.41%), Postives = 72/116 (62.07%), Query Frame = 1
Query: 115 TSTSSLSMGF-DFKGTLEKMSDTRYARVRHILVEEKGEEGRSKLEEAKEEIAGDLDKFSEVAEKMSTCTSAPRGGRLKLLARGETVPEFDDIAFNGELGVVHGPVETQFGTHLIYV 459
++T+ L GF D GT K T+ A HIL++ G E +KLEE K EI KF+E A + S+C SA +GG L G+ V EFD + FN ++GVVHGP++TQFG HLIYV
Sbjct: 23 STTTKLFGGFMDEVGTFFKRF-TQKASASHILIKG-GPEAANKLEELKVEIDNSPVKFAEAASRFSSCPSARKGGELGEFGPGQMVKEFDQVVFNDDVGVVHGPIKTQFGYHLIYV 136
BLAST of mRNA_Ecto-sp13_S_contig6417.17179.1 vs. uniprot
Match: A0A7S2HC75_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HC75_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 7.040e-19 Identity = 43/92 (46.74%), Postives = 56/92 (60.87%), Query Frame = 1
Query: 187 ARVRHILVEEKGEEGRSKLEEAKEEIAGDLDKFSEVAEKMSTCTSAPRGGRLKLLARGETVPEFDDIAFNGELGVVHGPVETQFGTHLIYVE 462
A HIL++ E K++ KEEI D+ KF+E A + S C S +GG L R VPEFD + FN E+GVVHGP+ T FG HLI++E
Sbjct: 18 AEASHILIKGTDAEAEQKIKAIKEEIGNDVTKFAEAATQHSDCPSGRQGGSLGEFGRYSMVPEFDKVVFNEEVGVVHGPIRTSFGFHLIFIE 109
BLAST of mRNA_Ecto-sp13_S_contig6417.17179.1 vs. uniprot
Match: A0A2E3DHP9_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E3DHP9_9PLAN) HSP 1 Score: 87.4 bits (215), Expect = 2.960e-18 Identity = 50/95 (52.63%), Postives = 59/95 (62.11%), Query Frame = 1
Query: 187 ARVRHILVEEKGEEGRSKLEEAKEEIAGDLDKFSEVAEKMSTCTSAPRGGRLKLLARGETVPEFDDIAFNGELGVVHGPVETQFGTHLIYVESCN 471
A RHILVE K EE K +IAG LD F+ A + S C S+ +GG L RG+ VPEFD + F E+GVVHGPVETQFG HLI + S N
Sbjct: 97 AAARHILVETK-----EACEELKSKIAGGLD-FAAAAAEHSKCPSSSQGGELGTFGRGQMVPEFDKVVFEEEVGVVHGPVETQFGFHLIEITSRN 185
BLAST of mRNA_Ecto-sp13_S_contig6417.17179.1 vs. uniprot
Match: A0A7R9W6N6_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W6N6_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 3.850e-18 Identity = 44/98 (44.90%), Postives = 58/98 (59.18%), Query Frame = 1
Query: 178 TRYARVRHILVEEKGEEGRSKLEEAKEEIAGDLDKFSEVAEKMSTCTSAPRGGRLKLLARGETVPEFDDIAFNGELGVVHGPVETQFGTHLIYVESCN 471
T A HIL++ + K+++ K+EI D DKF+E+A S C S +GG L R VPEFD + FN E+GVVHGP+ET FG HLI + N
Sbjct: 71 TMRAEASHILIKGTDSGAKRKIDDIKKEIGNDSDKFAELAALTSDCPSGQQGGSLGEFGRYSMVPEFDKVVFNEEVGVVHGPIETSFGYHLILIHRRN 168
BLAST of mRNA_Ecto-sp13_S_contig6417.17179.1 vs. uniprot
Match: A0A2D8J063_9ALTE (Peptidylprolyl isomerase n=2 Tax=Alteromonadaceae TaxID=72275 RepID=A0A2D8J063_9ALTE) HSP 1 Score: 83.6 bits (205), Expect = 8.590e-18 Identity = 46/93 (49.46%), Postives = 59/93 (63.44%), Query Frame = 1
Query: 187 ARVRHILVEEKGEEGRSKLEEAKEEIAGDLDKFSEVAEKMSTCTSAPRGGRLKLLARGETVPEFDDIAFNGELGVVHGPVETQFGTHLIYVES 465
A RHILV++K + E K+EI G D F+ VA + STC S +GG L RG+ VPEFD + F+G+L VHGPV+TQFG HL+ V S
Sbjct: 4 ASARHILVKDKAQ-----CENLKKEIEGGRD-FAAVAREHSTCPSGKQGGDLGEFGRGQMVPEFDQVVFSGDLNTVHGPVQTQFGYHLLEVTS 90
BLAST of mRNA_Ecto-sp13_S_contig6417.17179.1 vs. uniprot
Match: S0JGD6_9FIRM (Peptidylprolyl isomerase n=1 Tax=Eubacterium sp. 14-2 TaxID=1235790 RepID=S0JGD6_9FIRM) HSP 1 Score: 87.4 bits (215), Expect = 1.110e-17 Identity = 52/121 (42.98%), Postives = 72/121 (59.50%), Query Frame = 1
Query: 160 LEKMSDTRYARVRHILVEEKGEEGRSKLEEAKEEIAGDLDKFSEVAEKMSTCTSAPRGGRLKLLARGETVPEFDDIAFNGELGVVHGPVETQFGTHLIYVESCNKPQNTWKMLFDDIVDKV 522
+E+ + R RHILV+ R + E +E+ LD F+E AEK STC S +GG L RG+ VPEF+ AF GE+G + GPVETQFG HLI VE +K + + K FD + +++
Sbjct: 107 MEQFQEKAQVRARHILVDT-----RQQAESVSQELEQGLD-FAEAAEKYSTCPSREKGGDLGYFTRGQMVPEFEKAAFEGEIGKLIGPVETQFGCHLILVE--DKKEGSVKP-FDQVQEQI 218
BLAST of mRNA_Ecto-sp13_S_contig6417.17179.1 vs. uniprot
Match: UPI0012644084 (peptidylprolyl isomerase n=1 Tax=Sulfurimonas indica TaxID=2508707 RepID=UPI0012644084) HSP 1 Score: 83.2 bits (204), Expect = 1.180e-17 Identity = 45/92 (48.91%), Postives = 59/92 (64.13%), Query Frame = 1
Query: 184 YARVRHILVEEKGEEGRSKLEEAKEEIAGDLDKFSEVAEKMSTCTSAPRGGRLKLLARGETVPEFDDIAFNGELGVVHGPVETQFGTHLIYV 459
+A RHILVE + +K E KEEI D F E+A++ STC S+ GG L G+ VPEFD FNG++GVV+GP++TQFG HL+ V
Sbjct: 3 WATARHILVESE-----AKCNELKEEIENGAD-FGEIAKQYSTCPSSRNGGDLGQFGPGQMVPEFDKAVFNGDVGVVYGPIQTQFGYHLLEV 88
BLAST of mRNA_Ecto-sp13_S_contig6417.17179.1 vs. uniprot
Match: A0A1W1BRN3_9ZZZZ (Peptidyl-prolyl cis-trans isomerase PpiC n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A1W1BRN3_9ZZZZ) HSP 1 Score: 83.2 bits (204), Expect = 1.210e-17 Identity = 43/91 (47.25%), Postives = 57/91 (62.64%), Query Frame = 1
Query: 187 ARVRHILVEEKGEEGRSKLEEAKEEIAGDLDKFSEVAEKMSTCTSAPRGGRLKLLARGETVPEFDDIAFNGELGVVHGPVETQFGTHLIYV 459
A RHILV ++ SK + KE+I F EVA S C S +GG L + ++G+ VPEFD + FN E+GVVHGP++TQFG HLI +
Sbjct: 4 ASARHILVNDE-----SKCMDLKEQIVSGQKTFVEVARDQSLCPSGVKGGDLGIFSQGQMVPEFDKVVFNDEVGVVHGPIQTQFGYHLIEI 89 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6417.17179.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6417.17179.1 >prot_Ecto-sp13_S_contig6417.17179.1 ID=prot_Ecto-sp13_S_contig6417.17179.1|Name=mRNA_Ecto-sp13_S_contig6417.17179.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=185bp MMRKTVLLLLCVLVSVAGFVPAPSICRNARSAVGTPARTSTSSLSMGFDFback to top mRNA from alignment at Ecto-sp13_S_contig6417:530..2915+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6417.17179.1 ID=mRNA_Ecto-sp13_S_contig6417.17179.1|Name=mRNA_Ecto-sp13_S_contig6417.17179.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2386bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6417:530..2915+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6417:530..2915+ >mRNA_Ecto-sp13_S_contig6417.17179.1 ID=mRNA_Ecto-sp13_S_contig6417.17179.1|Name=mRNA_Ecto-sp13_S_contig6417.17179.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=555bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6417:530..2915+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |