prot_Ecto-sp13_S_contig6318.17059.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6318.17059.1
Unique Nameprot_Ecto-sp13_S_contig6318.17059.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length529
Homology
BLAST of mRNA_Ecto-sp13_S_contig6318.17059.1 vs. uniprot
Match: A0A6H5JPV4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPV4_9PHAE)

HSP 1 Score: 340 bits (872), Expect = 8.730e-105
Identity = 284/318 (89.31%), Postives = 286/318 (89.94%), Query Frame = 0
Query:  213 MPRADLLAEPSAAAAAGSPLTRGKATTTGAAPSP---SRLSXXXXXXXXXAGGSIGRAGSNRLLHGMATEAGIGGGSSSTDNSPRRPSVGRGVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGRTDGXXMXEGEEGRDGEAGAAATEDPKAARIEQLRKLTKDCLEENMSDTAAYYADKLVTFSNFDREAVLLLAKAQFSCGAYLRTVHLLAQHRLLDYADNFGLRACHLAARSLRAAEKTEESVSLLEKVLGHSDDHAEEVKARAKVCSRSV 527
            MPRADLLAEPSAAAAAGSPLTRGKAT           SRLS         AGGSIGRAGSNRLLHGMA EAGIGGGSSSTDNSPRRPS GRGV XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  RTDGXX XEGEEGRDG AGAAATEDPKAARIEQLRKLTK+CLEENMSDTAAYYADKLVTFSNFDREAVLLLAKAQF+CGAYLRTVHLLAQHRLLDYADNFGLRACHLAARSLRAAEKTEESVSLLEKVLGHSDDHA EVKARAKV    V
Sbjct:    1 MPRADLLAEPSAAAAAGSPLTRGKATAXXXXXXXXXXSRLSGGASSSRRRAGGSIGRAGSNRLLHGMAPEAGIGGGSSSTDNSPRRPSAGRGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-RTDGXXXXEGEEGRDGNAGAAATEDPKAARIEQLRKLTKNCLEENMSDTAAYYADKLVTFSNFDREAVLLLAKAQFACGAYLRTVHLLAQHRLLDYADNFGLRACHLAARSLRAAEKTEESVSLLEKVLGHSDDHAVEVKARAKVARSGV 317          
BLAST of mRNA_Ecto-sp13_S_contig6318.17059.1 vs. uniprot
Match: D8LN33_ECTSI (Putative subunit of the Anaphase Promoting Complex n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN33_ECTSI)

HSP 1 Score: 274 bits (701), Expect = 3.700e-79
Identity = 229/257 (89.11%), Postives = 236/257 (91.83%), Query Frame = 0
Query:  276 MATEAGIGGGSSSTDNSPRRPSVGRGVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----IGRTDGXXMXEGEEGRDGEAGAAATEDPKAARIEQLRKLTKDCLEENMSDTAAYYADKLVTFSNFDREAVLLLAKAQFSCGAYLRTVHLLAQHRLLDYADNFGLRACHLAARSLRAAEKTEESVSLLEKVLGHSDDHAEEVKARAKVCSRSVS 528
            MA EAGIGGGSSSTDNSPRRPS GR   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    X    IGRTDG  M +GEEGRDG+AGAAATEDPKAARIEQLR+LTK+CLEENMSDTAAYYADKLVTFSNFDREAVLLLAKAQF+CGAYLRTVHLLAQHRLLDYADNFGLRACHLAARSLRAAEKTEESVSLLEKVLGH+DDHAEEVKARAK     V+
Sbjct:    1 MAPEAGIGGGSSSTDNSPRRPSAGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSHAXXXXXIGRTDGGGMGDGEEGRDGQAGAAATEDPKAARIEQLRELTKNCLEENMSDTAAYYADKLVTFSNFDREAVLLLAKAQFACGAYLRTVHLLAQHRLLDYADNFGLRACHLAARSLRAAEKTEESVSLLEKVLGHTDDHAEEVKARAKAARSGVA 257          
BLAST of mRNA_Ecto-sp13_S_contig6318.17059.1 vs. uniprot
Match: A0A383WBY8_TETOB (Uncharacterized protein n=2 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383WBY8_TETOB)

HSP 1 Score: 62.8 bits (151), Expect = 1.060e-6
Identity = 36/94 (38.30%), Postives = 57/94 (60.64%), Query Frame = 0
Query:  409 EQLRKLTKDCLEENMSDTAAYYADKLVTFSNFDREAVLLLAKAQFSCGAYLRTVHLLAQHRLLDYADNFGLRACHLAARSLRAAEKTEESVSLL 502
            +QLR L +DC+ +++  TA +YADKLVT + +    V L+A+  F  G + R V LL  H L++      +R  +LAA+SL A +  +E ++LL
Sbjct:    6 DQLRSLVQDCIAKHLYSTAVFYADKLVTLTQYAPGDVYLVAQTYFVSGQHRRAVMLLKHHGLME-----DVRFRYLAAKSLAAVDDWDEVLALL 94          
BLAST of mRNA_Ecto-sp13_S_contig6318.17059.1 vs. uniprot
Match: A0A7J7PWQ9_9CHLO (Uncharacterized protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PWQ9_9CHLO)

HSP 1 Score: 57.8 bits (138), Expect = 3.750e-5
Identity = 34/93 (36.56%), Postives = 54/93 (58.06%), Query Frame = 0
Query:  410 QLRKLTKDCLEENMSDTAAYYADKLVTFSNFDREAVLLLAKAQFSCGAYLRTVHLLAQHRLLDYADNFGLRACHLAARSLRAAEKTEESVSLL 502
            QLR L +DC+ +++  TA +YADKLVT + +    V L+A+  F    + R V LL  H L++      +R  +LAA+ L   E+ +E ++LL
Sbjct:    5 QLRSLVQDCIAKHLYSTAVFYADKLVTLTQYAPGDVYLVAQTYFVSRQHRRAVMLLKHHGLME-----DVRFRYLAAKCLAEVEEWDECLTLL 92          
BLAST of mRNA_Ecto-sp13_S_contig6318.17059.1 vs. uniprot
Match: A0A061QQV3_9CHLO (Cell division n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061QQV3_9CHLO)

HSP 1 Score: 57.0 bits (136), Expect = 4.620e-5
Identity = 35/92 (38.04%), Postives = 55/92 (59.78%), Query Frame = 0
Query:  411 LRKLTKDCLEENMSDTAAYYADKLVTFSNFDREAVLLLAKAQFSCGAYLRTVHLLAQHRLLDYADNFGLRACHLAARSLRAAEKTEESVSLL 502
            LR L +DC+E+++  +AA++ADKLVT SN++   V LLA+  F    + R + LL Q + ++    F     +LAAR L    + EE +S+L
Sbjct:   10 LRSLIQDCIEKHLYTSAAFFADKLVTLSNYEPGDVYLLAQTFFLGRNFRRALKLLNQSKTVERDARFR----YLAARCLFECSEWEECLSML 97          
BLAST of mRNA_Ecto-sp13_S_contig6318.17059.1 vs. uniprot
Match: A0A061RDF5_9CHLO (Anaphase-promoting complex subunit 6 n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RDF5_9CHLO)

HSP 1 Score: 57.0 bits (136), Expect = 6.630e-5
Identity = 35/92 (38.04%), Postives = 55/92 (59.78%), Query Frame = 0
Query:  411 LRKLTKDCLEENMSDTAAYYADKLVTFSNFDREAVLLLAKAQFSCGAYLRTVHLLAQHRLLDYADNFGLRACHLAARSLRAAEKTEESVSLL 502
            LR L +DC+E+++  +AA++ADKLVT SN++   V LLA+  F    + R + LL Q + ++    F     +LAAR L    + EE +S+L
Sbjct:   10 LRSLIQDCIEKHLYTSAAFFADKLVTLSNYEPGDVYLLAQTFFLGRNFRRALKLLNQSKTVERDARFR----YLAARCLFECSEWEECLSML 97          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6318.17059.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5JPV4_9PHAE8.730e-10589.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LN33_ECTSI3.700e-7989.11Putative subunit of the Anaphase Promoting Complex... [more]
A0A383WBY8_TETOB1.060e-638.30Uncharacterized protein n=2 Tax=Tetradesmus obliqu... [more]
A0A7J7PWQ9_9CHLO3.750e-536.56Uncharacterized protein n=1 Tax=Scenedesmus sp. NR... [more]
A0A061QQV3_9CHLO4.620e-538.04Cell division n=1 Tax=Tetraselmis sp. GSL018 TaxID... [more]
A0A061RDF5_9CHLO6.630e-538.04Anaphase-promoting complex subunit 6 n=1 Tax=Tetra... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 386..525
e-value: 2.3E-16
score: 61.5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 15..528
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 10..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6318contigEcto-sp13_S_contig6318:3596..7860 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6318.17059.1mRNA_Ecto-sp13_S_contig6318.17059.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6318 3596..7860 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6318.17059.1 ID=prot_Ecto-sp13_S_contig6318.17059.1|Name=mRNA_Ecto-sp13_S_contig6318.17059.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=529bp
AAWFIFVLSSPSNAQQGIANNNNNNNNNNNEPNSARLRLKPPHPPPPLLP
SLFCRCRCQQQQQQQQHISFNHHHHHCCCCCCALPSLSKPRAPRAAAGGA
SAFHVVLWGGGPKSPTTSSHRDPRSGSGGGWAGRRRNSSSSSADGTAAAP
GLDDSYSSPPSQLPAKRKRVSSPSPEQQQEQVAVPDSCELPAAAEEERVG
EDLVVGGLPPARMPRADLLAEPSAAAAAGSPLTRGKATTTGAAPSPSRLS
GGASSSRRRAGGSIGRAGSNRLLHGMATEAGIGGGSSSTDNSPRRPSVGR
GVGGGVGNGSTAVGAAGRGGKGKGKARPRSVVVPSSTSASATANGGVATA
AAAAATSGNSGGGGGSRSHADGGGGIGRTDGGGMGEGEEGRDGEAGAAAT
EDPKAARIEQLRKLTKDCLEENMSDTAAYYADKLVTFSNFDREAVLLLAK
AQFSCGAYLRTVHLLAQHRLLDYADNFGLRACHLAARSLRAAEKTEESVS
LLEKVLGHSDDHAEEVKARAKVCSRSVS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf