prot_Ecto-sp13_S_contig6306.17051.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6306.17051.1
Unique Nameprot_Ecto-sp13_S_contig6306.17051.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length317
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6306.17051.1 vs. uniprot
Match: D7FJ24_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ24_ECTSI)

HSP 1 Score: 442 bits (1136), Expect = 1.050e-153
Identity = 248/295 (84.07%), Postives = 257/295 (87.12%), Query Frame = 0 
Query:    1 MVERSAHDMGLADLRELMLDLAAASLDEEVNGSCETETCRALVAVVDAIPSREYGDAFSSLVAGLCDPSARGLEARMTTFTWPLLARNVPFKRSSSSSPHGSRGEGVVIGXXXXXXXXXATEAADGVGITIAAAAANSAVVPSLSHEVCHRLLKERFLKDTSYVDAKESPEGLGRALKALDVLLENEDDVLESETQEGYKRQYVVVALANEMAAGSMAVSRTAKPDGNECRKMVRLLEGINRELTSVMQNSVQMSKTLLDLMKSKYTPFLPASSGVQSKLSFGGKTVTSFVGENS 295
            MVERSAHDMGLADLRELMLDLAAASLDEEVNGSCETETCRALVAVVDA+P+REYGDAFSSLVAGLCDPSARGLE+R+TTFTWPLLARNVPFKRSS               XXXXXXXXX                    VVPSLSHEVCHRLLKERFLKDTSY DA+ESP+GLGRALKALDVLLENEDDVLESETQEGYKRQYVVVALANEMAAGSMAVSRTAKPDG+EC+KMVRLLE INRELTSVMQNSVQMSKTLLDLMKSKYTPFLPASSGVQSKLSFGGKTVTSF GE+S
Sbjct:    1 MVERSAHDMGLADLRELMLDLAAASLDEEVNGSCETETCRALVAVVDAMPAREYGDAFSSLVAGLCDPSARGLESRVTTFTWPLLARNVPFKRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVPSLSHEVCHRLLKERFLKDTSYADAEESPQGLGRALKALDVLLENEDDVLESETQEGYKRQYVVVALANEMAAGSMAVSRTAKPDGDECKKMVRLLEAINRELTSVMQNSVQMSKTLLDLMKSKYTPFLPASSGVQSKLSFGGKTVTSFGGEDS 295
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6306.17051.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FJ24_ECTSI1.050e-15384.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6306contigEcto-sp13_S_contig6306:2604..6733 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6306.17051.1mRNA_Ecto-sp13_S_contig6306.17051.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6306 1382..6733 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6306.17051.1 ID=prot_Ecto-sp13_S_contig6306.17051.1|Name=mRNA_Ecto-sp13_S_contig6306.17051.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=317bp
MVERSAHDMGLADLRELMLDLAAASLDEEVNGSCETETCRALVAVVDAIP
SREYGDAFSSLVAGLCDPSARGLEARMTTFTWPLLARNVPFKRSSSSSPH
GSRGEGVVIGGGEGGNNNNATEAADGVGITIAAAAANSAVVPSLSHEVCH
RLLKERFLKDTSYVDAKESPEGLGRALKALDVLLENEDDVLESETQEGYK
RQYVVVALANEMAAGSMAVSRTAKPDGNECRKMVRLLEGINRELTSVMQN
SVQMSKTLLDLMKSKYTPFLPASSGVQSKLSFGGKTVTSFVGENSSDDDD
DDDDDDEEEEDETESQ*
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