prot_Ecto-sp13_S_contig62448.16972.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig62448.16972.1
Unique Nameprot_Ecto-sp13_S_contig62448.16972.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length77
Homology
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BLAST of mRNA_Ecto-sp13_S_contig62448.16972.1 vs. uniprot
Match: D7FPC4_ECTSI (Ubiquitin activating enzyme E1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPC4_ECTSI)

HSP 1 Score: 120 bits (302), Expect = 3.950e-30
Identity = 67/77 (87.01%), Postives = 70/77 (90.91%), Query Frame = 0 
Query:    1 MRSSARGSGVSPRRERERESAEGAVAAEVTEGRRGLLGRVWGAFFGPFQAGAGGSNVRGEIAGDSEE-EEWSESQED 76
            MRSSARGSG SPRRERE ESAEGAVAAEV EGRRGL+GRVWGAFFGP QAG GGS+V GE+AGDSEE EEWSESQED
Sbjct: 1070 MRSSARGSGASPRREREEESAEGAVAAEVREGRRGLVGRVWGAFFGPLQAGVGGSSVEGEMAGDSEEDEEWSESQED 1146
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BLAST of mRNA_Ecto-sp13_S_contig62448.16972.1 vs. uniprot
Match: A0A6H5KE41_9PHAE (UBA_e1_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE41_9PHAE)

HSP 1 Score: 68.6 bits (166), Expect = 9.640e-12
Identity = 44/75 (58.67%), Postives = 49/75 (65.33%), Query Frame = 0 
Query:    1 MRSSARGSGVSPRRERERESAEGAVAAEVTEGRRGLLGRVWGAFFGPFQAGAGGSNVRGEIAGDSEEEE---WSE 72
            MRSSARGSG SPRRER                   L+GRVWGAFFGP QAG+GGS+V GE+A DSEEEE   WS+
Sbjct:  685 MRSSARGSGASPRRERXXXXXXXXXXXXXXXXXX-LVGRVWGAFFGPLQAGSGGSSVEGEMARDSEEEEEEEWSD 758
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig62448.16972.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FPC4_ECTSI3.950e-3087.01Ubiquitin activating enzyme E1 n=1 Tax=Ectocarpus ... [more]
A0A6H5KE41_9PHAE9.640e-1258.67UBA_e1_C domain-containing protein n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig62448contigEcto-sp13_S_contig62448:410..640 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig62448.16972.1mRNA_Ecto-sp13_S_contig62448.16972.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig62448 238..797 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig62448.16972.1 ID=prot_Ecto-sp13_S_contig62448.16972.1|Name=mRNA_Ecto-sp13_S_contig62448.16972.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=77bp
MRSSARGSGVSPRRERERESAEGAVAAEVTEGRRGLLGRVWGAFFGPFQA
GAGGSNVRGEIAGDSEEEEWSESQED*
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