prot_Ecto-sp13_S_contig592.16453.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig592.16453.1
Unique Nameprot_Ecto-sp13_S_contig592.16453.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length293
Homology
BLAST of mRNA_Ecto-sp13_S_contig592.16453.1 vs. uniprot
Match: D8LJ91_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ91_ECTSI)

HSP 1 Score: 575 bits (1481), Expect = 4.610e-207
Identity = 286/292 (97.95%), Postives = 291/292 (99.66%), Query Frame = 0
Query:    1 MKSVAFFVALFAATDAWRSIEVPEPSFGSRFTSIKEEADRFSAACRDVLNGEGPTFTIDVSDHSLSDGVGSLNLEGRFQREVVDNVDCGVVYKFNECRGMPTSLWVSTTQDLGDDMTANVRADMDIDSKNAVIDCRVNSGRDSVAVDFDTADSTMGPLRITKHLDLNGRKVIVQPTVDVQGKTGEVVVAAELDGDVTSAELTVNHAEDSAVLEVCHRLDDNNVISPKVDLKTGDIAVRLNRSLGDARAVKFTAQRENVDWEYLEGAWVVKGNVPLTSDGSTGAISFKRSITL 292
            MKSVAFFVALFAATDAWR++EVPEPSFGSRFTSIKEEADRFSAACRD LNGEGPTFTIDVSDHSLSDGVGSLNLEGRFQREVVDNVDCGVVYKFNECRGMPTSLWVSTTQDLGDDMTAN+RADMDIDSKNAVIDCRVNSGRDSVAVDFDTADSTMGPLRITKHLDLNGRKVIVQPTVDVQGKTGEVVVAAELDGDVTSAELTVNHAEDSAVLEVCHRLDDNNVISPKVDLKTGDIAVRLNRSLGDARAVKFTAQRENVDWEYLEGAWVVKGNVPLTS+G+TGAISFKRSITL
Sbjct:    1 MKSVAFFVALFAATDAWRTVEVPEPSFGSRFTSIKEEADRFSAACRDALNGEGPTFTIDVSDHSLSDGVGSLNLEGRFQREVVDNVDCGVVYKFNECRGMPTSLWVSTTQDLGDDMTANLRADMDIDSKNAVIDCRVNSGRDSVAVDFDTADSTMGPLRITKHLDLNGRKVIVQPTVDVQGKTGEVVVAAELDGDVTSAELTVNHAEDSAVLEVCHRLDDNNVISPKVDLKTGDIAVRLNRSLGDARAVKFTAQRENVDWEYLEGAWVVKGNVPLTSNGATGAISFKRSITL 292          
BLAST of mRNA_Ecto-sp13_S_contig592.16453.1 vs. uniprot
Match: A0A6H5K004_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K004_9PHAE)

HSP 1 Score: 569 bits (1467), Expect = 1.190e-203
Identity = 285/292 (97.60%), Postives = 289/292 (98.97%), Query Frame = 0
Query:    1 MKSVAFFVALFAATDAWRSIEVPEPSFGSRFTSIKEEADRFSAACRDVLNGEGPTFTIDVSDHSLSDGVGSLNLEGRFQREVVDNVDCGVVYKFNECRGMPTSLWVSTTQDLGDDMTANVRADMDIDSKNAVIDCRVNSGRDSVAVDFDTADSTMGPLRITKHLDLNGRKVIVQPTVDVQGKTGEVVVAAELDGDVTSAELTVNHAEDSAVLEVCHRLDDNNVISPKVDLKTGDIAVRLNRSLGDARAVKFTAQRENVDWEYLEGAWVVKGNVPLTSDGSTGAISFKRSITL 292
            MKSVAFFVALFAATDAWR++EV EPSFGSRFTSIKEEADRFSAACRDVLNGEGPTFTIDVSDHSLSDGVGSLNLEGRFQREVVDNVDCGVVYKFNE RGMPTSLWVSTTQDLGDDMTAN+RADMDIDSKNAVIDCRVNSGRDSVAVDFDTADSTMGPLRITKHLDLNGRKVIVQPTVDVQGKTGEVV+AAELDGDVTSAELTVNHAEDSAVLEVCHRLDDNNVISPKVDLKTGDIAVRLNRSLGDARAVKFTAQRENVDWEYLEG WVVKGNVPLTSDGSTGAISFKRSITL
Sbjct:   81 MKSVAFFVALFAATDAWRTVEVAEPSFGSRFTSIKEEADRFSAACRDVLNGEGPTFTIDVSDHSLSDGVGSLNLEGRFQREVVDNVDCGVVYKFNERRGMPTSLWVSTTQDLGDDMTANLRADMDIDSKNAVIDCRVNSGRDSVAVDFDTADSTMGPLRITKHLDLNGRKVIVQPTVDVQGKTGEVVIAAELDGDVTSAELTVNHAEDSAVLEVCHRLDDNNVISPKVDLKTGDIAVRLNRSLGDARAVKFTAQRENVDWEYLEGPWVVKGNVPLTSDGSTGAISFKRSITL 372          
BLAST of mRNA_Ecto-sp13_S_contig592.16453.1 vs. uniprot
Match: A0A836CCC7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCC7_9STRA)

HSP 1 Score: 273 bits (698), Expect = 2.000e-88
Identity = 128/240 (53.33%), Postives = 181/240 (75.42%), Query Frame = 0
Query:   53 GPTFTIDVSDHSLSDGVGSLNLEGRFQREVVDNVDCGVVYKFNECRGMPTSLWVSTTQDLGDDMTANVRADMDIDSKNAVIDCRVNSGRDSVAVDFDTADSTMGPLRITKHLDLNGRKVIVQPTVDVQGKTGEVVVAAELDGDVTSAELTVNHAEDSAVLEVCHRLDDNNVISPKVDLKTGDIAVRLNRSLGDARAVKFTAQRENVDWEYLEGAWVVKGNVPLTSDGSTGAISFKRSITL 292
            GP F ++++D SL DG GSLNLEG + RE+VDNV+ GV Y +N  RG+P+SLWVST+ D+ DD     +A+ D+ SK  VI+ R+  G D +++DFDT  +  GPL++ K LD+NGR++ ++PT++V+ +TGE+V+  E+D D T+AELT+N A++SA LEV HRLDD NV+SPKV+LK+GD++VRLNR+L +   ++ TA R+NVDWE+ E AW VKGN+PL   G++  ISFKRSI L
Sbjct:   21 GPVFHVNINDPSLKDGAGSLNLEGEYSRELVDNVNAGVKYDYNANRGLPSSLWVSTSADIDDDTKLCAKAEYDVKSKATVIEARLERGSDGISIDFDTGSNEAGPLKLRKVLDMNGRRLTLEPTINVRDRTGELVINTEVDEDKTTAELTLNQADESASLEVSHRLDDFNVVSPKVNLKSGDVSVRLNRALDNGGVIEVTADRKNVDWEFNENAWTVKGNIPLEDTGAS-TISFKRSINL 259          
BLAST of mRNA_Ecto-sp13_S_contig592.16453.1 vs. uniprot
Match: A0A836CPR3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPR3_9STRA)

HSP 1 Score: 253 bits (645), Expect = 2.190e-80
Identity = 123/250 (49.20%), Postives = 174/250 (69.60%), Query Frame = 0
Query:   43 AACRDVLNGEGPTFTIDVSDHSLSDGVGSLNLEGRFQREVVDNVDCGVVYKFNECRGMPTSLWVSTTQDLGDDMTANVRADMDIDSKNAVIDCRVNSGRDSVAVDFDTADSTMGPLRITKHLDLNGRKVIVQPTVDVQGKTGEVVVAAELDGDVTSAELTVNHAEDSAVLEVCHRLDDNNVISPKVDLKTGDIAVRLNRSLGDARAVKFTAQRENVDWEYLEGAWVVKGNVPLTSDGSTGAISFKRSITL 292
            AA        GP   I+V D SLS GVGSLNL G   RE+V+NV+ G+ Y +N  RG+P+SLWVST+ ++ DD+  + +A+ D+ SK+ +I+ R+  G D +A+DFDT  +  GPLRI K  D NGR+++V+P  +V+ +TGE+V+ +E+D D+T+AELT++ A DSA LEV HRLD+ N++ PKVDLK GD++VRL R+L +   +  TA + N+DWE  E +W VKGN+PL  D     ISFKRSI+L
Sbjct:   12 AAVATAKQTSGPVLHINVDDPSLSQGVGSLNLSGEVSRELVENVNAGLKYDYNTNRGLPSSLWVSTSAEVDDDVYVSAKAEYDLKSKSTIIEARLERGDDEIAIDFDTLTNEAGPLRIRKVFDANGRRLVVKPKFNVRDRTGELVINSEIDSDITTAELTLDQATDSASLEVSHRLDEYNIVCPKVDLKNGDMSVRLVRALENGGVLGVTADKRNIDWELEEDSWTVKGNIPL-EDTQRSTISFKRSISL 260          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig592.16453.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LJ91_ECTSI4.610e-20797.95Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K004_9PHAE1.190e-20397.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CCC7_9STRA2.000e-8853.33Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CPR3_9STRA2.190e-8049.20Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..292
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..16
score: 0.604

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig592contigEcto-sp13_S_contig592:5978..8918 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig592.16453.1mRNA_Ecto-sp13_S_contig592.16453.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig592 5365..8918 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig592.16453.1 ID=prot_Ecto-sp13_S_contig592.16453.1|Name=mRNA_Ecto-sp13_S_contig592.16453.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=293bp
MKSVAFFVALFAATDAWRSIEVPEPSFGSRFTSIKEEADRFSAACRDVLN
GEGPTFTIDVSDHSLSDGVGSLNLEGRFQREVVDNVDCGVVYKFNECRGM
PTSLWVSTTQDLGDDMTANVRADMDIDSKNAVIDCRVNSGRDSVAVDFDT
ADSTMGPLRITKHLDLNGRKVIVQPTVDVQGKTGEVVVAAELDGDVTSAE
LTVNHAEDSAVLEVCHRLDDNNVISPKVDLKTGDIAVRLNRSLGDARAVK
FTAQRENVDWEYLEGAWVVKGNVPLTSDGSTGAISFKRSITL*
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