prot_Ecto-sp13_S_contig59.16422.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig59.16422.1
Unique Nameprot_Ecto-sp13_S_contig59.16422.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length167
Homology
BLAST of mRNA_Ecto-sp13_S_contig59.16422.1 vs. uniprot
Match: D8LQ80_ECTSI (Histone H1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ80_ECTSI)

HSP 1 Score: 154 bits (388), Expect = 3.640e-45
Identity = 79/80 (98.75%), Postives = 79/80 (98.75%), Query Frame = 0
Query:    1 MASTKPTYNVMVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGVESGKFIKMKASYKLSAEAKKPAPK 80
            MASTKPTYN MVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGVESGKFIKMKASYKLSAEAKKPAPK
Sbjct:    1 MASTKPTYNAMVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGVESGKFIKMKASYKLSAEAKKPAPK 80          
BLAST of mRNA_Ecto-sp13_S_contig59.16422.1 vs. uniprot
Match: A0A6H5KCU1_9PHAE (H15 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCU1_9PHAE)

HSP 1 Score: 144 bits (362), Expect = 1.050e-39
Identity = 73/77 (94.81%), Postives = 74/77 (96.10%), Query Frame = 0
Query:    3 STKPTYNVMVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGVESGKFIKMKASYKLSAEAKKPAP 79
            + KPTYNVMVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMR ALKKGVESGKFIKMKASYKLS EAKKPAP
Sbjct:   96 TAKPTYNVMVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRGALKKGVESGKFIKMKASYKLSPEAKKPAP 172          
BLAST of mRNA_Ecto-sp13_S_contig59.16422.1 vs. uniprot
Match: A0A6H5KST0_9PHAE (H15 domain-containing protein n=6 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KST0_9PHAE)

HSP 1 Score: 135 bits (339), Expect = 1.640e-37
Identity = 69/70 (98.57%), Postives = 70/70 (100.00%), Query Frame = 0
Query:   11 MVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGVESGKFIKMKASYKLSAEAKKPAPK 80
            MVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGVESGKF+KMKASYKLSAEAKKPAPK
Sbjct:    1 MVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGVESGKFVKMKASYKLSAEAKKPAPK 70          
BLAST of mRNA_Ecto-sp13_S_contig59.16422.1 vs. uniprot
Match: D8LQ75_ECTSI (H15 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ75_ECTSI)

HSP 1 Score: 126 bits (317), Expect = 6.220e-34
Identity = 64/70 (91.43%), Postives = 68/70 (97.14%), Query Frame = 0
Query:   11 MVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGVESGKFIKMKASYKLSAEAKKPAPK 80
            MVFDAIK+LKERNGSSIQAIKKSITATYP LNFTPHQMRSALKKGVE+GKFIK+K+SYKLSAEAKKP PK
Sbjct:    1 MVFDAIKSLKERNGSSIQAIKKSITATYPALNFTPHQMRSALKKGVETGKFIKVKSSYKLSAEAKKPVPK 70          
BLAST of mRNA_Ecto-sp13_S_contig59.16422.1 vs. uniprot
Match: D7G4I5_ECTSI (H15 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4I5_ECTSI)

HSP 1 Score: 124 bits (310), Expect = 4.470e-33
Identity = 64/79 (81.01%), Postives = 71/79 (89.87%), Query Frame = 0
Query:    1 MAST-KPTYNVMVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGVESGKFIKMKASYKLSAEAKKPA 78
            MA+T KPTY+VMVFDAIK LKER GSS+ A+KK I ATYP+LNFTPHQMRSALKKG ESGKFIK+K+SYKLS EAKKPA
Sbjct:    1 MATTAKPTYSVMVFDAIKALKERGGSSLPALKKQIMATYPSLNFTPHQMRSALKKGTESGKFIKVKSSYKLSPEAKKPA 79          
BLAST of mRNA_Ecto-sp13_S_contig59.16422.1 vs. uniprot
Match: A0A6H5JHR9_9PHAE (H15 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHR9_9PHAE)

HSP 1 Score: 111 bits (278), Expect = 1.170e-28
Identity = 56/68 (82.35%), Postives = 61/68 (89.71%), Query Frame = 0
Query:   11 MVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGVESGKFIKMKASYKLSAEAKKPA 78
            MVFDAIK LKER GSS+ A+KK I ATYP+LNFTPHQMRSALKKG ESGKFIK+K+SYKLS EAKKPA
Sbjct:    1 MVFDAIKALKERGGSSLPALKKQIMATYPSLNFTPHQMRSALKKGTESGKFIKVKSSYKLSPEAKKPA 68          
BLAST of mRNA_Ecto-sp13_S_contig59.16422.1 vs. uniprot
Match: A0A6H5K9S6_9PHAE (H15 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9S6_9PHAE)

HSP 1 Score: 100 bits (248), Expect = 9.360e-25
Identity = 50/61 (81.97%), Postives = 57/61 (93.44%), Query Frame = 0
Query:   11 MVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGVESGKFIKMKASYKLS 71
            MVFDAIKTLKERNGSSIQA+KKSITATYP L+FTPHQMRSALKKGVE+GKFIK++ +  L+
Sbjct:    1 MVFDAIKTLKERNGSSIQAMKKSITATYPALHFTPHQMRSALKKGVETGKFIKVRHALPLA 61          
BLAST of mRNA_Ecto-sp13_S_contig59.16422.1 vs. uniprot
Match: D8LMF1_ECTSI (H15 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMF1_ECTSI)

HSP 1 Score: 102 bits (253), Expect = 1.680e-24
Identity = 52/72 (72.22%), Postives = 58/72 (80.56%), Query Frame = 0
Query:    6 PTYNVMVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGVESGKFIKMKASYKLSAEAKKP 77
            PTY+ M   AI  LKERNGSS+ AIKK I ATYPTLNF PHQ+R ALKKG E+G FIK+KASYK+S EAKKP
Sbjct:    2 PTYSEMAKVAILALKERNGSSVPAIKKHIQATYPTLNFLPHQLRGALKKGTETGTFIKVKASYKVSPEAKKP 73          
BLAST of mRNA_Ecto-sp13_S_contig59.16422.1 vs. uniprot
Match: D8LJB8_ECTSI (H15 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJB8_ECTSI)

HSP 1 Score: 102 bits (255), Expect = 1.740e-23
Identity = 53/75 (70.67%), Postives = 62/75 (82.67%), Query Frame = 0
Query:    6 PTYNVMVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGVESGKFIKMKASYKLSAEAKKPAPK 80
            PTY+ M  +A+K LKERNGSS+ AIKK ITA+YP+L FT H MRSALKKGVESGKFIK+K SYKLSA  ++PA K
Sbjct:    2 PTYDEMTIEAVKALKERNGSSLFAIKKHITASYPSLTFTAHFMRSALKKGVESGKFIKVKNSYKLSAYRQEPAAK 76          
BLAST of mRNA_Ecto-sp13_S_contig59.16422.1 vs. uniprot
Match: A0A6H5JIM8_9PHAE (H15 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM8_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 3.590e-21
Identity = 49/67 (73.13%), Postives = 57/67 (85.07%), Query Frame = 0
Query:    6 PTYNVMVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGVESGKFIKMKASYKLSA 72
            PTY+ M  +A+K LKERNGSS+ AIKK ITA+YP+L FT H +RSALKKGVESGKFIK+K SYKLSA
Sbjct:    2 PTYDEMTVEAVKALKERNGSSLFAIKKHITASYPSLTFTGHFLRSALKKGVESGKFIKVKNSYKLSA 68          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig59.16422.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQ80_ECTSI3.640e-4598.75Histone H1 n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A6H5KCU1_9PHAE1.050e-3994.81H15 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KST0_9PHAE1.640e-3798.57H15 domain-containing protein n=6 Tax=Ectocarpus T... [more]
D8LQ75_ECTSI6.220e-3491.43H15 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G4I5_ECTSI4.470e-3381.01H15 domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A6H5JHR9_9PHAE1.170e-2882.35H15 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5K9S6_9PHAE9.360e-2581.97H15 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LMF1_ECTSI1.680e-2472.22H15 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LJB8_ECTSI1.740e-2370.67H15 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JIM8_9PHAE3.590e-2173.13H15 domain-containing protein n=1 Tax=Ectocarpus s... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005818Linker histone H1/H5, domain H15SMARTSM00526h15plus2coord: 2..67
e-value: 2.7E-23
score: 93.4
IPR005818Linker histone H1/H5, domain H15PFAMPF00538Linker_histonecoord: 5..70
e-value: 1.2E-19
score: 70.5
IPR005818Linker histone H1/H5, domain H15PROSITEPS51504H15coord: 4..72
score: 28.707
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 1..87
e-value: 2.9E-19
score: 71.0
NoneNo IPR availablePANTHERPTHR11467HISTONE H1coord: 4..164
NoneNo IPR availablePANTHERPTHR11467:SF42HISTONE H1OOcoord: 4..164
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 4..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig59contigEcto-sp13_S_contig59:41042..42792 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig59.16422.1mRNA_Ecto-sp13_S_contig59.16422.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig59 41042..44157 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig59.16422.1 ID=prot_Ecto-sp13_S_contig59.16422.1|Name=mRNA_Ecto-sp13_S_contig59.16422.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=167bp
MASTKPTYNVMVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRS
ALKKGVESGKFIKMKASYKLSAEAKKPAPKKKVVKKKVVKKVVQKKVVKK
KVPKKVAKKPAVKTTTKKPAAKKATTTKKTVTKKKPTAVKKPAAKKTTAK
KKPSTPKKKAAAPKKA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005818Histone_H1/H5_H15
IPR036388WH-like_DNA-bd_sf
IPR036390WH_DNA-bd_sf