mRNA_Ecto-sp13_S_contig59.16422.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig59.16422.1 vs. uniprot
Match: D8LQ80_ECTSI (Histone H1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ80_ECTSI) HSP 1 Score: 154 bits (388), Expect = 1.360e-40 Identity = 79/80 (98.75%), Postives = 79/80 (98.75%), Query Frame = 1
Query: 1 MASTKPTYNVMVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGVESGKFIKMKASYKLSAEAKKPAPK 240
MASTKPTYN MVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGVESGKFIKMKASYKLSAEAKKPAPK
Sbjct: 1 MASTKPTYNAMVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGVESGKFIKMKASYKLSAEAKKPAPK 80
BLAST of mRNA_Ecto-sp13_S_contig59.16422.1 vs. uniprot
Match: A0A6H5KCU1_9PHAE (H15 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCU1_9PHAE) HSP 1 Score: 144 bits (362), Expect = 2.120e-35 Identity = 73/77 (94.81%), Postives = 74/77 (96.10%), Query Frame = 1
Query: 7 STKPTYNVMVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGVESGKFIKMKASYKLSAEAKKPAP 237
+ KPTYNVMVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMR ALKKGVESGKFIKMKASYKLS EAKKPAP
Sbjct: 96 TAKPTYNVMVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRGALKKGVESGKFIKMKASYKLSPEAKKPAP 172
BLAST of mRNA_Ecto-sp13_S_contig59.16422.1 vs. uniprot
Match: A0A6H5KST0_9PHAE (H15 domain-containing protein n=6 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KST0_9PHAE) HSP 1 Score: 135 bits (339), Expect = 1.750e-33 Identity = 69/70 (98.57%), Postives = 70/70 (100.00%), Query Frame = 1
Query: 31 MVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGVESGKFIKMKASYKLSAEAKKPAPK 240
MVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGVESGKF+KMKASYKLSAEAKKPAPK
Sbjct: 1 MVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGVESGKFVKMKASYKLSAEAKKPAPK 70
BLAST of mRNA_Ecto-sp13_S_contig59.16422.1 vs. uniprot
Match: D8LQ75_ECTSI (H15 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ75_ECTSI) HSP 1 Score: 126 bits (317), Expect = 3.510e-30 Identity = 64/70 (91.43%), Postives = 68/70 (97.14%), Query Frame = 1
Query: 31 MVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGVESGKFIKMKASYKLSAEAKKPAPK 240
MVFDAIK+LKERNGSSIQAIKKSITATYP LNFTPHQMRSALKKGVE+GKFIK+K+SYKLSAEAKKP PK
Sbjct: 1 MVFDAIKSLKERNGSSIQAIKKSITATYPALNFTPHQMRSALKKGVETGKFIKVKSSYKLSAEAKKPVPK 70
BLAST of mRNA_Ecto-sp13_S_contig59.16422.1 vs. uniprot
Match: D7G4I5_ECTSI (H15 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4I5_ECTSI) HSP 1 Score: 124 bits (310), Expect = 2.030e-29 Identity = 64/79 (81.01%), Postives = 71/79 (89.87%), Query Frame = 1
Query: 1 MAST-KPTYNVMVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGVESGKFIKMKASYKLSAEAKKPA 234
MA+T KPTY+VMVFDAIK LKER GSS+ A+KK I ATYP+LNFTPHQMRSALKKG ESGKFIK+K+SYKLS EAKKPA
Sbjct: 1 MATTAKPTYSVMVFDAIKALKERGGSSLPALKKQIMATYPSLNFTPHQMRSALKKGTESGKFIKVKSSYKLSPEAKKPA 79
BLAST of mRNA_Ecto-sp13_S_contig59.16422.1 vs. uniprot
Match: A0A6H5JHR9_9PHAE (H15 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHR9_9PHAE) HSP 1 Score: 111 bits (278), Expect = 1.860e-25 Identity = 56/68 (82.35%), Postives = 61/68 (89.71%), Query Frame = 1
Query: 31 MVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGVESGKFIKMKASYKLSAEAKKPA 234
MVFDAIK LKER GSS+ A+KK I ATYP+LNFTPHQMRSALKKG ESGKFIK+K+SYKLS EAKKPA
Sbjct: 1 MVFDAIKALKERGGSSLPALKKQIMATYPSLNFTPHQMRSALKKGTESGKFIKVKSSYKLSPEAKKPA 68
BLAST of mRNA_Ecto-sp13_S_contig59.16422.1 vs. uniprot
Match: A0A6H5K9S6_9PHAE (H15 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9S6_9PHAE) HSP 1 Score: 100 bits (248), Expect = 5.110e-22 Identity = 50/61 (81.97%), Postives = 57/61 (93.44%), Query Frame = 1
Query: 31 MVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGVESGKFIKMKASYKLS 213
MVFDAIKTLKERNGSSIQA+KKSITATYP L+FTPHQMRSALKKGVE+GKFIK++ + L+
Sbjct: 1 MVFDAIKTLKERNGSSIQAMKKSITATYPALHFTPHQMRSALKKGVETGKFIKVRHALPLA 61
BLAST of mRNA_Ecto-sp13_S_contig59.16422.1 vs. uniprot
Match: D8LMF1_ECTSI (H15 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMF1_ECTSI) HSP 1 Score: 102 bits (253), Expect = 1.150e-21 Identity = 52/72 (72.22%), Postives = 58/72 (80.56%), Query Frame = 1
Query: 16 PTYNVMVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGVESGKFIKMKASYKLSAEAKKP 231
PTY+ M AI LKERNGSS+ AIKK I ATYPTLNF PHQ+R ALKKG E+G FIK+KASYK+S EAKKP
Sbjct: 2 PTYSEMAKVAILALKERNGSSVPAIKKHIQATYPTLNFLPHQLRGALKKGTETGTFIKVKASYKVSPEAKKP 73
BLAST of mRNA_Ecto-sp13_S_contig59.16422.1 vs. uniprot
Match: D8LJB8_ECTSI (H15 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJB8_ECTSI) HSP 1 Score: 102 bits (255), Expect = 1.410e-20 Identity = 53/75 (70.67%), Postives = 62/75 (82.67%), Query Frame = 1
Query: 16 PTYNVMVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGVESGKFIKMKASYKLSAEAKKPAPK 240
PTY+ M +A+K LKERNGSS+ AIKK ITA+YP+L FT H MRSALKKGVESGKFIK+K SYKLSA ++PA K
Sbjct: 2 PTYDEMTIEAVKALKERNGSSLFAIKKHITASYPSLTFTAHFMRSALKKGVESGKFIKVKNSYKLSAYRQEPAAK 76
BLAST of mRNA_Ecto-sp13_S_contig59.16422.1 vs. uniprot
Match: A0A6H5JIM8_9PHAE (H15 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM8_9PHAE) HSP 1 Score: 96.7 bits (239), Expect = 1.720e-18 Identity = 49/67 (73.13%), Postives = 57/67 (85.07%), Query Frame = 1
Query: 16 PTYNVMVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGVESGKFIKMKASYKLSA 216
PTY+ M +A+K LKERNGSS+ AIKK ITA+YP+L FT H +RSALKKGVESGKFIK+K SYKLSA
Sbjct: 2 PTYDEMTVEAVKALKERNGSSLFAIKKHITASYPSLTFTGHFLRSALKKGVESGKFIKVKNSYKLSA 68 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig59.16422.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig59.16422.1 >prot_Ecto-sp13_S_contig59.16422.1 ID=prot_Ecto-sp13_S_contig59.16422.1|Name=mRNA_Ecto-sp13_S_contig59.16422.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=167bp MASTKPTYNVMVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRSback to top mRNA from alignment at Ecto-sp13_S_contig59:41042..44157+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig59.16422.1 ID=mRNA_Ecto-sp13_S_contig59.16422.1|Name=mRNA_Ecto-sp13_S_contig59.16422.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3116bp|location=Sequence derived from alignment at Ecto-sp13_S_contig59:41042..44157+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig59:41042..44157+ >mRNA_Ecto-sp13_S_contig59.16422.1 ID=mRNA_Ecto-sp13_S_contig59.16422.1|Name=mRNA_Ecto-sp13_S_contig59.16422.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=501bp|location=Sequence derived from alignment at Ecto-sp13_S_contig59:41042..44157+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |