prot_Ecto-sp13_S_contig585.16332.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig585.16332.1
Unique Nameprot_Ecto-sp13_S_contig585.16332.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length124
Homology
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BLAST of mRNA_Ecto-sp13_S_contig585.16332.1 vs. uniprot
Match: D7FZC0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZC0_ECTSI)

HSP 1 Score: 122 bits (305), Expect = 8.230e-34
Identity = 62/73 (84.93%), Postives = 68/73 (93.15%), Query Frame = 0 
Query:   27 VWDGNNN-INARQQQREHGNNSKTSDSCTPTARADREGKSVDGFVSRPSPTCTGRLSSRSTGPYQVHGTIRPN 98
            VW+GNNN I+ARQ+QREHG+NSK SDSCTPTARADREGKSVDGFVSR  P+CTGRLSSRSTGP QV+GTIRPN
Sbjct:   19 VWNGNNNNISARQRQREHGSNSKISDSCTPTARADREGKSVDGFVSRAFPSCTGRLSSRSTGPCQVYGTIRPN 91
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig585.16332.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FZC0_ECTSI8.230e-3484.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig585contigEcto-sp13_S_contig585:17624..18673 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig585.16332.1mRNA_Ecto-sp13_S_contig585.16332.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig585 17624..18949 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig585.16332.1 ID=prot_Ecto-sp13_S_contig585.16332.1|Name=mRNA_Ecto-sp13_S_contig585.16332.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=124bp
KNDGRSDDGSDDRKIVTTTLYEHIFEVWDGNNNINARQQQREHGNNSKTS
DSCTPTARADREGKSVDGFVSRPSPTCTGRLSSRSTGPYQVHGTIRPNKR
RPLADSGVIIRRKESFSVVFCVL*
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