prot_Ecto-sp13_S_contig5841.16319.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5841.16319.1
Unique Nameprot_Ecto-sp13_S_contig5841.16319.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length148
Homology
BLAST of mRNA_Ecto-sp13_S_contig5841.16319.1 vs. uniprot
Match: D8LSE4_ECTSI (Glutaredoxin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSE4_ECTSI)

HSP 1 Score: 201 bits (511), Expect = 6.850e-64
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0
Query:   48 SMNSVDFVEKEIDSNNVVVFSKSYCPFCTRTKNLFAGLGVDATVYELDQMDDGEAIQAILGAKTGQTTVPNVFVKGTHVGGNDAVQAANSSGALKTLLDG 147
            SMNSVDFVEKEIDSNNVVVFSKSYCPFCTRTKNLFAGLGVDATVYELDQMDDGEAIQAILGAKTGQTTVPNVFVKGTHVGGNDAVQAANSSGALKTLLDG
Sbjct:   56 SMNSVDFVEKEIDSNNVVVFSKSYCPFCTRTKNLFAGLGVDATVYELDQMDDGEAIQAILGAKTGQTTVPNVFVKGTHVGGNDAVQAANSSGALKTLLDG 155          
BLAST of mRNA_Ecto-sp13_S_contig5841.16319.1 vs. uniprot
Match: A0A835YTN8_9STRA (Glutaredoxin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTN8_9STRA)

HSP 1 Score: 129 bits (324), Expect = 2.270e-35
Identity = 63/95 (66.32%), Postives = 73/95 (76.84%), Query Frame = 0
Query:   53 DFVEKEIDSNNVVVFSKSYCPFCTRTKNLFAGLGVDATVYELDQMDDGEAIQAILGAKTGQTTVPNVFVKGTHVGGNDAVQAANSSGALKTLLDG 147
            DFV+++I S ++VVFSKSYCP+C +TK LF  L   ATV ELDQ DDG  IQA L   TGQ TVPNVFVKGTHVGGNDA Q ANS G LK+L++G
Sbjct:   66 DFVKQQIASQDIVVFSKSYCPYCAKTKALFQSLDAGATVIELDQRDDGGDIQAALAEITGQRTVPNVFVKGTHVGGNDATQKANSDGTLKSLMNG 160          
BLAST of mRNA_Ecto-sp13_S_contig5841.16319.1 vs. uniprot
Match: A0A7S2R353_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R353_9STRA)

HSP 1 Score: 125 bits (314), Expect = 6.200e-34
Identity = 67/126 (53.17%), Postives = 84/126 (66.67%), Query Frame = 0
Query:   22 LGVGGLGPYLLCRSTRVACRPRLLARSMNSV-DFVEKEIDSNNVVVFSKSYCPFCTRTKNLFAGLGVDATVYELDQMDDGEAIQAILGAKTGQTTVPNVFVKGTHVGGNDAVQAANSSGALKTLLD 146
            L  G LG  L+  S R   +       M+S  DFV++EI +N+VVVFSKS+CPFC +TK+L  G+ +D T  EL+QMDDG  IQ  L   +GQ TVPNVFVKG H+GGND  Q A  SGALKT+L+
Sbjct:   33 LARGALGASLVSNSRRCNSQDSQTVCQMSSASDFVKQEIANNDVVVFSKSFCPFCKKTKSLLDGMDIDYTALELNQMDDGADIQDALMDLSGQRTVPNVFVKGNHLGGNDDAQKAAKSGALKTMLE 158          
BLAST of mRNA_Ecto-sp13_S_contig5841.16319.1 vs. uniprot
Match: A0A168RTQ5_ABSGL (Glutaredoxin domain-containing protein n=1 Tax=Absidia glauca TaxID=4829 RepID=A0A168RTQ5_ABSGL)

HSP 1 Score: 121 bits (303), Expect = 5.210e-33
Identity = 62/95 (65.26%), Postives = 73/95 (76.84%), Query Frame = 0
Query:   55 VEKEIDS----NNVVVFSKSYCPFCTRTKNLFAGLGVDATVYELDQMDDGEAIQAILGAKTGQTTVPNVFVKGTHVGGNDAVQAANSSGALKTLL 145
            VE+++DS    N VV+FSKSYCP+C+ TKNLF  LGV+A V ELDQ+DDG AIQ  L  KTGQ TVPNVFV   HVGGN  VQAANS+G+L+ LL
Sbjct:    5 VEEKVDSLIKNNKVVIFSKSYCPYCSATKNLFKQLGVEAVVLELDQIDDGAAIQDYLQKKTGQRTVPNVFVAQQHVGGNSDVQAANSNGSLEKLL 99          
BLAST of mRNA_Ecto-sp13_S_contig5841.16319.1 vs. uniprot
Match: A0A1Z5KQE3_FISSO (Glutaredoxin 3 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KQE3_FISSO)

HSP 1 Score: 122 bits (305), Expect = 1.070e-32
Identity = 62/103 (60.19%), Postives = 73/103 (70.87%), Query Frame = 0
Query:   44 LLARSMNS-VDFVEKEIDSNNVVVFSKSYCPFCTRTKNLFAGLGVDATVYELDQMDDGEAIQAILGAKTGQTTVPNVFVKGTHVGGNDAVQAANSSGALKTLL 145
            L  R M S  DF+  EI+SN V +FSKSYCPFC++TK  FA LGVDA ++EL+QMDDG  IQ  L   TGQ TVPNVFV G H+GGND  Q A +SG +K LL
Sbjct:   44 LTVRHMASKTDFITSEINSNQVTIFSKSYCPFCSKTKASFAELGVDAKIFELNQMDDGADIQDTLFEMTGQKTVPNVFVNGKHIGGNDDTQKAIASGEMKKLL 146          
BLAST of mRNA_Ecto-sp13_S_contig5841.16319.1 vs. uniprot
Match: A0A7S1CWF6_9CHLO (Hypothetical protein n=1 Tax=Picochlorum oklahomense TaxID=249345 RepID=A0A7S1CWF6_9CHLO)

HSP 1 Score: 120 bits (302), Expect = 2.550e-32
Identity = 57/92 (61.96%), Postives = 69/92 (75.00%), Query Frame = 0
Query:   55 VEKEIDSNNVVVFSKSYCPFCTRTKNLFAGLGVDATVYELDQMDDGEAIQAILGAKTGQTTVPNVFVKGTHVGGNDAVQAANSSGALKTLLD 146
            V+  I + +VVVFSKS+CPFC +TK LF  LGVDA +YELDQ DDG  IQA L   TGQ+TVPNVF+KG H+GGND  Q AN+SG L  +L+
Sbjct:   50 VDDAIKAKDVVVFSKSFCPFCAKTKTLFRELGVDADIYELDQRDDGSEIQATLKEMTGQSTVPNVFIKGEHLGGNDDTQQANASGELAKMLE 141          
BLAST of mRNA_Ecto-sp13_S_contig5841.16319.1 vs. uniprot
Match: A0A1X2GSF3_9FUNG (Glutaredoxin n=1 Tax=Hesseltinella vesiculosa TaxID=101127 RepID=A0A1X2GSF3_9FUNG)

HSP 1 Score: 119 bits (299), Expect = 2.670e-32
Identity = 58/92 (63.04%), Postives = 69/92 (75.00%), Query Frame = 0
Query:   55 VEKEIDSNNVVVFSKSYCPFCTRTKNLFAGLGVDATVYELDQMDDGEAIQAILGAKTGQTTVPNVFVKGTHVGGNDAVQAANSSGALKTLLD 146
            VE+ I +N +V+FSK+YCP+CT TK LF  LG DAT+ ELD  +DG AIQ  L  KTGQ TVPNVFVK  H+GGND VQAAN +G LK LL+
Sbjct:   16 VEELIANNKIVIFSKTYCPYCTSTKTLFKKLGQDATIIELDTRNDGSAIQNYLLTKTGQRTVPNVFVKQQHIGGNDNVQAANGNGTLKKLLE 107          
BLAST of mRNA_Ecto-sp13_S_contig5841.16319.1 vs. uniprot
Match: A0A7S3NI43_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NI43_9STRA)

HSP 1 Score: 120 bits (301), Expect = 2.860e-32
Identity = 60/107 (56.07%), Postives = 75/107 (70.09%), Query Frame = 0
Query:   39 ACRPRLLARSMNSVDFVEKEIDSNNVVVFSKSYCPFCTRTKNLFAGLGVDATVYELDQMDDGEAIQAILGAKTGQTTVPNVFVKGTHVGGNDAVQAANSSGALKTLL 145
            A R  + A  +N    ++  I +N+VV+FSKSYCPFC +TK LF  L VDA +YELDQ DDG  IQ+ L  KTGQ+TVPNVF+KG H+GGND  Q A++SG L  LL
Sbjct:   31 AARRSMAASCLN----IDDTIKANDVVIFSKSYCPFCAKTKALFQSLNVDADIYELDQRDDGAEIQSKLKEKTGQSTVPNVFIKGEHLGGNDDTQRAHASGKLAELL 133          
BLAST of mRNA_Ecto-sp13_S_contig5841.16319.1 vs. uniprot
Match: A0A1Z5KSJ8_FISSO (Glutaredoxin 3 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KSJ8_FISSO)

HSP 1 Score: 118 bits (295), Expect = 8.530e-32
Identity = 58/93 (62.37%), Postives = 70/93 (75.27%), Query Frame = 0
Query:   53 DFVEKEIDSNNVVVFSKSYCPFCTRTKNLFAGLGVDATVYELDQMDDGEAIQAILGAKTGQTTVPNVFVKGTHVGGNDAVQAANSSGALKTLL 145
            DF++KE D++ VVV+SKSYCP+CT TKNLF  L V   V+ELDQM +G  IQA L   TGQ TVPNVF+KG H+GGND  QAA+ SG L+ LL
Sbjct:    6 DFIQKEHDASPVVVWSKSYCPYCTATKNLFQKLNVPHKVHELDQMSNGNDIQAALQQMTGQRTVPNVFIKGKHLGGNDDTQAAHRSGHLQQLL 98          
BLAST of mRNA_Ecto-sp13_S_contig5841.16319.1 vs. uniprot
Match: A0A7S2L780_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2L780_9STRA)

HSP 1 Score: 118 bits (296), Expect = 3.660e-31
Identity = 64/101 (63.37%), Postives = 72/101 (71.29%), Query Frame = 0
Query:   48 SMNSVD---FVEKEIDSNNVVVFSKSYCPFCTRTKNLFAGLGVDATVYELDQMDDGEAIQAILGAKTGQTTVPNVFVKGTHVGGNDAVQAANSSGALKTLL 145
            SM+S D   FV  EI SN+VVVFSK+YCPFCT TK LF  L VDA V ELD +D+G  IQ  L  KTGQ TVP+VF+KG H+GGNDA QAA  SG L T L
Sbjct:   52 SMSSTDSAAFVLAEIGSNDVVVFSKTYCPFCTSTKTLFEKLNVDAKVVELDTLDNGADIQGALLDKTGQRTVPSVFIKGEHIGGNDATQAAFQSGDLFTKL 152          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5841.16319.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSE4_ECTSI6.850e-64100.00Glutaredoxin n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A835YTN8_9STRA2.270e-3566.32Glutaredoxin n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A7S2R353_9STRA6.200e-3453.17Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A168RTQ5_ABSGL5.210e-3365.26Glutaredoxin domain-containing protein n=1 Tax=Abs... [more]
A0A1Z5KQE3_FISSO1.070e-3260.19Glutaredoxin 3 n=1 Tax=Fistulifera solaris TaxID=1... [more]
A0A7S1CWF6_9CHLO2.550e-3261.96Hypothetical protein n=1 Tax=Picochlorum oklahomen... [more]
A0A1X2GSF3_9FUNG2.670e-3263.04Glutaredoxin n=1 Tax=Hesseltinella vesiculosa TaxI... [more]
A0A7S3NI43_9STRA2.860e-3256.07Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A1Z5KSJ8_FISSO8.530e-3262.37Glutaredoxin 3 n=2 Tax=Fistulifera solaris TaxID=1... [more]
A0A7S2L780_9STRA3.660e-3163.37Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014025Glutaredoxin subgroupPRINTSPR00160GLUTAREDOXINcoord: 64..82
score: 49.56
coord: 123..136
score: 31.25
coord: 109..122
score: 49.4
IPR011899Glutaredoxin, eukaryotic/virialTIGRFAMTIGR02180TIGR02180coord: 64..144
e-value: 4.0E-29
score: 98.6
IPR002109GlutaredoxinPFAMPF00462Glutaredoxincoord: 64..126
e-value: 6.2E-18
score: 64.8
IPR002109GlutaredoxinPROSITEPS51354GLUTAREDOXIN_2coord: 52..147
score: 22.233
NoneNo IPR availableGENE3D3.40.30.10coord: 50..147
e-value: 6.7E-35
score: 121.2
NoneNo IPR availablePANTHERPTHR45694FAMILY NOT NAMEDcoord: 53..145
NoneNo IPR availablePANTHERPTHR45694:SF5GLUTAREDOXIN 2coord: 53..145
IPR011767Glutaredoxin active sitePROSITEPS00195GLUTAREDOXIN_1coord: 66..81
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 52..146

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5841contigEcto-sp13_S_contig5841:5629..8021 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5841.16319.1mRNA_Ecto-sp13_S_contig5841.16319.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5841 5052..8389 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5841.16319.1 ID=prot_Ecto-sp13_S_contig5841.16319.1|Name=mRNA_Ecto-sp13_S_contig5841.16319.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=148bp
MTLVPRTIATTTKPETLAKSPLGVGGLGPYLLCRSTRVACRPRLLARSMN
SVDFVEKEIDSNNVVVFSKSYCPFCTRTKNLFAGLGVDATVYELDQMDDG
EAIQAILGAKTGQTTVPNVFVKGTHVGGNDAVQAANSSGALKTLLDG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014025Glutaredoxin_subgr
IPR011899Glutaredoxin_euk/vir
IPR002109Glutaredoxin
IPR011767GLR_AS
IPR036249Thioredoxin-like_sf