prot_Ecto-sp13_S_contig5825.16294.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5825.16294.1
Unique Nameprot_Ecto-sp13_S_contig5825.16294.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length733
Homology
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BLAST of mRNA_Ecto-sp13_S_contig5825.16294.1 vs. uniprot
Match: A0A6H5L1B7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1B7_9PHAE)

HSP 1 Score: 801 bits (2070), Expect = 1.150e-283
Identity = 531/660 (80.45%), Postives = 537/660 (81.36%), Query Frame = 0 
Query:   53 MTVNLTRDEGCELPLNAPRRPQHDESSRKAAESSSXXXXFSGGRASAPRATATRPRSNADCLLGGIGAGGVSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---VAFRRLTPPVTSTETIDTPVPLYPTCLDACGNMVALGTREGPVLLFDTTYGXXXXXXXXXXXXXXXXXXSDRCRDGVPPALETNAIAVRSVMTPRAAAA---------ALAGSSNRSGSTASVTRVYGSLADGTGPTTAVLLDRAKVIAAGRGSRRSGGGFVIRIYAVDSTRLLRTLRCLSEVSRMSLFDPVLAVLSSGSGRLSFRDLYADGGGGLGQRTAMGVSAAAFAAVEGHLTNTXXXXXXXXXXXGCSNTGATRPDYNGDGSTVLHCVNSTGTVFEASTSGAAWNSELIAPGGSEGGAVPAAAAGGG-WHVCADLEASLLVLATPWGTISGWRLHPSGRRARGPIFCFGLGSSCSASPSPSSRPLTSMSLTAGGLILATSAEGAPPRLWDMRLARRRCGWGLAADGGGPSQAGGARASGLRGTPAGGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGSTRQEGS-ADDADGRGGRFKTGRARCVGVRPWPVGAWAVGVAANAGSGRLVSACSDGRMRI 698
            MTVNLTRDEG E PLNAPRRPQHDESSRKA     XXXX    RASAPRATATRPRSNADCLLGG GA GV+S                       XXXXXXX                  VAFRRLTPPVT+TETIDTPVPLYPTCLD CGNMVALGTREGPVLLF TT G XXXXXXXXXXXXX    S   RDG P ALETNA A RS MTP AA A         ALAGSSNRSGSTASVTR YGSLADGTGPTTAVL+DRAKVIAAGRGSRRSGGGFVIRIYAVDSTRLLRTLRCLSEVSRMSLFDPVLAVLS GSGRLSFRDLYADGGGGLGQRTAMGVSAAAFAAVEGHLTN XXXXXXXXXXX    TG  RPDYNGDG+TVLHCVNSTGTVFEASTSGAAWNSELIAPGGSEGGA PAAAA GG WHVCADLEASLLVLATPWG ISGWRL+PSGRRARGPIFCFGLGSSCSASPSPSSRPLTSMSLTAGGLILATSAEGAPPRLWDMRL RRRCGWGLAADGGGPS AGGARASGLRGTPAGGRGXXXXXXXXXXXXXXXXXXXXXXX                    GSTRQEGS ADDAD RGGR   GRAR VGVRPWPVG WAVGVAANAGSGRLVSACSDGRMR+
Sbjct:    1 MTVNLTRDEGYEPPLNAPRRPQHDESSRKAXXXXXXXXXXXXXRASAPRATATRPRSNADCLLGGTGAVGVASSPPAGCYGGGASGAGTRKRNRAAXXXXXXXTASGATARRKFLRRYYHHVAFRRLTPPVTNTETIDTPVPLYPTCLDTCGNMVALGTREGPVLLFHTTNGSXXXXXXXXXXXXX----SGSYRDGAPLALETNAAAGRSAMTPPAARAPGKAATPTTALAGSSNRSGSTASVTRAYGSLADGTGPTTAVLVDRAKVIAAGRGSRRSGGGFVIRIYAVDSTRLLRTLRCLSEVSRMSLFDPVLAVLSLGSGRLSFRDLYADGGGGLGQRTAMGVSAAAFAAVEGHLTNNXXXXXXXXXXXX---TGTIRPDYNGDGTTVLHCVNSTGTVFEASTSGAAWNSELIAPGGSEGGADPAAAAAGGRWHVCADLEASLLVLATPWGAISGWRLNPSGRRARGPIFCFGLGSSCSASPSPSSRPLTSMSLTAGGLILATSAEGAPPRLWDMRLTRRRCGWGLAADGGGPSGAGGARASGLRGTPAGGRGXXXXXXXXXXXXXXXXXXXXXXXGAVA---------------AGSTRQEGSRADDADSRGGRVAAGRARYVGVRPWPVGIWAVGVAANAGSGRLVSACSDGRMRL 638
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BLAST of mRNA_Ecto-sp13_S_contig5825.16294.1 vs. uniprot
Match: D7FPS2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPS2_ECTSI)

HSP 1 Score: 373 bits (957), Expect = 2.740e-120
Identity = 254/386 (65.80%), Postives = 262/386 (67.88%), Query Frame = 0 
Query:    1 MDPGPSPSSSLPLHVVVTLLQFAVPEVVSLGEAQLLCKGASSSLASPAFWRGMTVNLTRDEGCELPLNAPRRPQHDESSRKAAESSSXXXXFSGGRASAPRATATRPRSNADCLLGGIGAGGVSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------VAFRRLTPPVTSTETIDTPVPLYPTCLDACGNMVALGTREGPVLLFDTTYGXXXXXXXXXXXXXXXXXXSDRCRDGVPPALETNAIAVRSVMTPRAAAAALAGSSNRSGSTASVTRVYGSLADGTGPTTAVLLDRAKVIAAGRGSRRSGGGFVIRIYAVDSTRLLRTLRCLSEVSRMSLFDPVLAVLSSGSGRLSFRDLYADGGGGLGQR 380
            MDPGPSPSS LPLHVVVT+LQFAVPEVVSL EA+LLCKGASSSLASP+FWRGMTVNLTRDEG E PLN+PRRPQHDESS K +    XXXX         RATATRPRSN DCLLGGIG  G++S                   XXXXXXXXXXXXXXXXXX              VAFRRLTPPVTSTETIDTPVPLYPTCLDAC    A   R        TT                                                  AL  SSNRS STASVTRVYGSLADGTGPTTAVLLDRAKVIAAGRGSRRSGGGFVIRIYAVDSTRLLRTLRC+SEVSRMSLFDPVLAVLS GSGRLSFRDLYADGGGGLGQR
Sbjct:    1 MDPGPSPSSRLPLHVVVTVLQFAVPEVVSLSEARLLCKGASSSLASPSFWRGMTVNLTRDEGYEPPLNSPRRPQHDESSSKVSAXXXXXXXXXXXXXXXXRATATRPRSNVDCLLGGIGVAGLASSPPAGCHGGGAISGAGTRKXXXXXXXXXXXXXXXXXXATAGRQFLRRYHHHVAFRRLTPPVTSTETIDTPVPLYPTCLDAC----AAAARVPGKAATPTT--------------------------------------------------ALNRSSNRSESTASVTRVYGSLADGTGPTTAVLLDRAKVIAAGRGSRRSGGGFVIRIYAVDSTRLLRTLRCVSEVSRMSLFDPVLAVLSWGSGRLSFRDLYADGGGGLGQR 332
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BLAST of mRNA_Ecto-sp13_S_contig5825.16294.1 vs. uniprot
Match: D7FPS3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPS3_ECTSI)

HSP 1 Score: 65.9 bits (159), Expect = 3.020e-10
Identity = 36/37 (97.30%), Postives = 36/37 (97.30%), Query Frame = 0 
Query:  696 MRITQLRPNNEEQRLRTAVLAARQAKQQAAARSGDAP 732
            MRITQLRPNNEEQRLRTAVLAARQAKQQAAARSG AP
Sbjct:    1 MRITQLRPNNEEQRLRTAVLAARQAKQQAAARSGGAP 37
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5825.16294.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L1B7_9PHAE1.150e-28380.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FPS2_ECTSI2.740e-12065.80Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FPS3_ECTSI3.020e-1097.30Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..29
score: 0.458
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 191..710

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5825contigEcto-sp13_S_contig5825:1241..7692 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5825.16294.1mRNA_Ecto-sp13_S_contig5825.16294.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5825 1201..8170 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5825.16294.1 ID=prot_Ecto-sp13_S_contig5825.16294.1|Name=mRNA_Ecto-sp13_S_contig5825.16294.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=733bp
MDPGPSPSSSLPLHVVVTLLQFAVPEVVSLGEAQLLCKGASSSLASPAFW
RGMTVNLTRDEGCELPLNAPRRPQHDESSRKAAESSSSASSFSGGRASAP
RATATRPRSNADCLLGGIGAGGVSSPPPAGCHGGGASGAGTRKKRRAAGA
ERTAAGSTARRQFLRRYHHHVAFRRLTPPVTSTETIDTPVPLYPTCLDAC
GNMVALGTREGPVLLFDTTYGGGGSGGGGGRSGGGGGGGSDRCRDGVPPA
LETNAIAVRSVMTPRAAAAALAGSSNRSGSTASVTRVYGSLADGTGPTTA
VLLDRAKVIAAGRGSRRSGGGFVIRIYAVDSTRLLRTLRCLSEVSRMSLF
DPVLAVLSSGSGRLSFRDLYADGGGGLGQRTAMGVSAAAFAAVEGHLTNT
TTTNNNNDNNNGCSNTGATRPDYNGDGSTVLHCVNSTGTVFEASTSGAAW
NSELIAPGGSEGGAVPAAAAGGGWHVCADLEASLLVLATPWGTISGWRLH
PSGRRARGPIFCFGLGSSCSASPSPSSRPLTSMSLTAGGLILATSAEGAP
PRLWDMRLARRRCGWGLAADGGGPSQAGGARASGLRGTPAGGRGGGSAAA
AAAAAAAGGGAAVAAAAAAAARGAAAAAAAAAGAAATGSTRQEGSADDAD
GRGGRFKTGRARCVGVRPWPVGAWAVGVAANAGSGRLVSACSDGRMRITQ
LRPNNEEQRLRTAVLAARQAKQQAAARSGDAP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf