prot_Ecto-sp13_S_contig581.16268.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig581.16268.1
Unique Nameprot_Ecto-sp13_S_contig581.16268.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length708
Homology
BLAST of mRNA_Ecto-sp13_S_contig581.16268.1 vs. uniprot
Match: D7FKV7_ECTSI (Eukaryotic translation initiation factor 3 subunit B n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKV7_ECTSI)

HSP 1 Score: 1373 bits (3555), Expect = 0.000e+0
Identity = 692/707 (97.88%), Postives = 695/707 (98.30%), Query Frame = 0
Query:    1 MGDQYYVDEYDEEPDMEELKDYMSPDEGDGDLAGFERPELNVDLSTAVVVSNLPQVVEAKHEKLGGVVRKVFSRMGTIADDGLTHPFDKTTGLTKGFAFVNFLNPQDAKQAAATLNGWQLDKSHLIKVYPFEQLARLRSLPEEYESPEPKPFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWSEKLQTPSLCYGGEREKEAGKAWCELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEYSPCETYVMTCNFEQGDKAIIVWEVLTGQMLRAFPMATTTAADGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGDVPKLEVTFYTMKGGAGKNELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXAMSDKIQMKLEFRQQASGLSRVAEMKHRLEGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ 707
            MGDQYYVDEYDEEPDM+ELKDYMSPDEGDGDLAGFERPELNVDLSTAVVVSNLPQVVEAKHEKLGGVVRKVFS+MGTIADDGLTHPFDKTTGLTKGFAFVNFLNPQDAKQAAATLNGWQLDKSHLIKVYPFEQLARLRSLPEEYESPEPKPFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWSEKLQTPSLCYGGEREKEAGKAWCELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVE+SPCETYVMTCNFEQGDKAIIVWEVLTGQMLRAFPMATTTAADGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGDVPKLEVTFYTMKGGAGKNELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXX    KIQMKLEFRQQ      VAEM  RLEGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ
Sbjct:    1 MGDQYYVDEYDEEPDMDELKDYMSPDEGDGDLAGFERPELNVDLSTAVVVSNLPQVVEAKHEKLGGVVRKVFSKMGTIADDGLTHPFDKTTGLTKGFAFVNFLNPQDAKQAAATLNGWQLDKSHLIKVYPFEQLARLRSLPEEYESPEPKPFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWSEKLQTPSLCYGGEREKEAGKAWCELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEFSPCETYVMTCNFEQGDKAIIVWEVLTGQMLRAFPMATTTAADGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGDVPKLEVTFYTMKGGAGKNELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXXXXXKIQMKLEFRQQ------VAEMNLRLEGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ 701          
BLAST of mRNA_Ecto-sp13_S_contig581.16268.1 vs. uniprot
Match: A0A835YNH6_9STRA (Eukaryotic translation initiation factor 3 subunit B n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNH6_9STRA)

HSP 1 Score: 839 bits (2168), Expect = 7.050e-298
Identity = 403/689 (58.49%), Postives = 514/689 (74.60%), Query Frame = 0
Query:   19 LKDYMSPDEGDGD-LAGFERPELNVDLSTAVVVSNLPQVVEAKHEKLGGVVRKVFSRMGTIADDGLTHPFDKTTGLTKGFAFVNFLNPQDAKQAAATLNGWQLDKSHLIKVYPFEQLARLRSLPEEYESPEPKPFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWSEKLQTPSLCYGGEREKEAGKAWCELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEYSPCETYVMTCNFEQGDKAIIVWEVLTGQMLRAFPMATTTAADGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDN--VLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLG-DVPKLEVTFYTMKGGAGKNELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXAMSDKIQMKLEFRQQASGLSRVAEMKHRLEGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVK 703
            L D+MS ++ D D L  F+RP+L +D STAVVV N+P+V   K  KL GVV K+F++ GTI ++G+  P D   G + GF F+NF   ++A+ A A +N +QLDK H   V+P+E+L +L S+P+EY  P P  ++PR D  SWLADE HRDQFV+RYS P   G   HE  V W E+   P+ CYGGEREK  GKAW EL++ WSPQGTYL + H+PGIALWGGE+FEKQGRF H +VKV+E+SPCE Y++TCNF+  ++A+IVWEV +G +LR FP        G  SLF+WS DG+++ARKG+D +SIY LPSM LLDKKSLKA G++DFEWSP  +   LAYWAPEQ N PARVSVVEIPSRK+LRQKNL  VSECRLHWQ+EG YLCVKVLRHSK+KKTMYNNFE+FRV +P VPVE +E +  V AFAWEP GDRFA+V G ++P++ +TFYTMKGGA  NEL E+ TL+D+P NH+YWSP G   ++AAMG++ G  NG L FYDVE+++ L+++EHFR +Y+EWDPSGRY CTAV+QP+ GSHWKAQMDNGY+L+SFQGE+F+E  KDNFYQ+ WRPRP SLL+S EKKKVV+NL+KYE+                AM+ K++ K  FR      + VA  + RL  R  ELV+LR+GYDS DE+++ V++RT EV++SVK
Sbjct:   31 LADWMSEEDPDDDGLGDFQRPQLRMDFSTAVVVDNIPRVPAEKLVKLRGVVTKLFNQCGTIQENGICIPTD-AAGESLGFMFINFTTAEEARSAVAVINNYQLDKRHQFHVFPYERLDQLASVPDEYAPPPPMEYRPRPDLGSWLADENHRDQFVIRYSMPGVGGTPAHETIVNWCERFAPPTQCYGGEREKAQGKAWVELYVTWSPQGTYLASLHIPGIALWGGEQFEKQGRFAHSNVKVIEFSPCENYLLTCNFDTTERAMIVWEVRSGAVLRTFPARAFEG--GPPSLFKWSPDGRFIARKGRDCVSIYALPSMALLDKKSLKATGIADFEWSPSTSSCALAYWAPEQDNTPARVSVVEIPSRKDLRQKNLFNVSECRLHWQNEGTYLCVKVLRHSKTKKTMYNNFELFRVADPQVPVEMLELRSNVIAFAWEPTGDRFAIVHGTELPRVNITFYTMKGGASGNELAEVVTLEDKPVNHLYWSPQGQFIVMAAMGENTGGTNGYLNFYDVESKTILRESEHFRLSYLEWDPSGRYICTAVNQPIDGSHWKAQMDNGYRLWSFQGEQFYELTKDNFYQVLWRPRPVSLLSSEEKKKVVRNLKKYERRFERADKIASRRKARAAMAGKVRQKQAFR------AHVAARRERLLARHHELVELRDGYDSHDEANFFVETRTREVIMSVK 710          
BLAST of mRNA_Ecto-sp13_S_contig581.16268.1 vs. uniprot
Match: A0A6H5KAX0_9PHAE (eIF2A domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAX0_9PHAE)

HSP 1 Score: 655 bits (1690), Expect = 9.940e-231
Identity = 341/405 (84.20%), Postives = 347/405 (85.68%), Query Frame = 0
Query:  303 DGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGDVPKLEVTFYTMKGGAGKNELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXAMSDKIQMKLEFRQQASGLSRVAEMKHRLEGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ 707
            DGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHW                                            QVAAFAWEPAGDRFALVLGDVPKLEVTFYTMKGGAGKNELQ LETLQDRPFNHIYWSP+GNIC+LAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTG HWKAQMDNGYQLFSFQGERFHEFKKD+FYQIQWRPRPASLLTSAEKKKVVKNLRKY+K       XXXXXX   AM+DKIQMKLEFRQQASGLSRVA+MK RLE RRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ
Sbjct:   14 DGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHW--------------------------------------------QVAAFAWEPAGDRFALVLGDVPKLEVTFYTMKGGAGKNELQVLETLQDRPFNHIYWSPVGNICILAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGGHWKAQMDNGYQLFSFQGERFHEFKKDHFYQIQWRPRPASLLTSAEKKKVVKNLRKYDKRFEKDDRXXXXXXAREAMADKIQMKLEFRQQASGLSRVADMKLRLEARRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ 374          
BLAST of mRNA_Ecto-sp13_S_contig581.16268.1 vs. uniprot
Match: A0A8K1FRG0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FRG0_PYTOL)

HSP 1 Score: 629 bits (1623), Expect = 1.260e-215
Identity = 333/699 (47.64%), Postives = 449/699 (64.23%), Query Frame = 0
Query:   17 EELKDYMSPDEGDGDLAGFERPELNV--DLSTAVVVSNLPQVVEAKHEKLGGVVRKVFSRMGTIADDGLTHPFDKTTGLTKGFAFVNFLNPQDAKQAAATLNGWQLDKSHLIKVYPFEQLARLRSLPEEYESPEPKPFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWSEKLQTPSLCYGGEREKEAGKAWCELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEYSPCETYVMTCNFEQGDKAIIVWEVLTGQMLRAFPMATTTAADGAA-----SLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGDV-PKLEVTFYTMKGGAGKNELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXAMSDKIQMKLEFRQQASGLSRVAEMKHRLEGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ 707
            E+ ++++S +E + ++   +  E +   D S  VVV  LP V  AKH KL  VV+K+FS++GT+ D  +  PF    G T GFAFV F     A  A  T+N + LDK H + V  +  L + +  PEE+ +P+ + F    +  +WL D   RD FVLR+S          E E+ WS+K +  +L Y G REK  GK WC  +++WSPQGTYL TFH  GIALWGG+ +EK GRF HK+VK+  +SP E Y++T +    + AII+W+V T +MLRAFP    T A G       + F+WSAD +++AR+GKD+IS+YELPSM+LLDKKSLKA+GV DF WSP D +LAYWAPE  N PARVS+VE+PSR+E+RQKNL  VS+C+L W   G +L VKV RHSKSKKT++ NFEIFRV E LVPVE+ E K  + AF++EP G RFA+V G+   +L V+FY M GGA KNEL  L TL D+P +H+YWSP GN  +LA +G+     NG LEF+D + + ++   EHF+C ++EWDPSGR   +AV QP+  S++K QMDNG+ L++FQG++  E KKD FYQ  WRPRP +LL+  E K VVKNL+KYEK                  ++K +   EF      +  VA        RRQE + L NGYDS+D+  Y+V++R+ + VLS KE +Q
Sbjct:   18 EKYEEFLSDEEVEDEVTTQKHEEEDFCNDYSMCVVVGGLPVVDNAKHGKLLNVVKKIFSQVGTVVD--IDMPF-AANGNTNGFAFVEFEQDTHANDAVRTINNFALDKRHTLLVNKYTDLEKYQKTPEEFVAPKIEKFVEPKNLKTWLMDSARRDMFVLRHST---------ETEIFWSDKGEV-TLDYDGAREKTNGKQWCSQYVLWSPQGTYLATFHPQGIALWGGDNYEKVGRFAHKNVKIAVFSPQENYLVTLSETDTENAIIIWDVKTSKMLRAFPAGKPTGAKGEVVQGLMTPFKWSADDRFVARRGKDVISVYELPSMKLLDKKSLKADGVHDFFWSPTDPILAYWAPEGNNVPARVSLVELPSRREVRQKNLFNVSDCKLQWHPNGTFLNVKVTRHSKSKKTLFTNFEIFRVHESLVPVESFEMKDTIVAFSFEPKGSRFAIVHGEGNQRLNVSFYDMNGGAKKNELTLLYTLTDKPCSHLYWSPHGNNIVLAGLGEI----NGVLEFWDTDEKQSITIQEHFKCTHVEWDPSGRVVSSAVCQPIDNSYYKFQMDNGFTLWTFQGKKLLEEKKDAFYQFLWRPRPRTLLSDKEYKDVVKNLKKYEKRFNEMDRMKERERIAAEKAEKQRQHQEF------VDLVAARAETARARRQEYIALLNGYDSEDDDEYIVETRSYDDVLSEKEEVQ 693          
BLAST of mRNA_Ecto-sp13_S_contig581.16268.1 vs. uniprot
Match: M4BHP4_HYAAE (Eukaryotic translation initiation factor 3 subunit B n=15 Tax=Peronosporaceae TaxID=4777 RepID=M4BHP4_HYAAE)

HSP 1 Score: 623 bits (1606), Expect = 1.220e-212
Identity = 329/699 (47.07%), Postives = 444/699 (63.52%), Query Frame = 0
Query:   17 EELKDYMSPDEGDGDLA--GFERPELNVDLSTAVVVSNLPQVVEAKHEKLGGVVRKVFSRMGTIADDGLTHPFDKTTGLTKGFAFVNFLNPQDAKQAAATLNGWQLDKSHLIKVYPFEQLARLRSLPEEYESPEPKPFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWSEKLQTPSLCYGGEREKEAGKAWCELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEYSPCETYVMTCNFEQGDKAIIVWEVLTGQMLRAFPMATTTAADGAA-----SLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGDVPK-LEVTFYTMKGGAG-KNELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXAMSDKIQMKLEFRQQASGLSRVAEMKHRLEGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVI 706
            E   DY+S +E + ++     E  +   D S AVVV  LP V ++KH KL  VV+K+F ++G++ D  +  PF    G T GFAFV +     A  A  T+N + LDK H + V  +E + R    P+E+ +P+   F    +  SWL D   RD FVLR+           E E+ WS+K +   L Y G+REK  GK WC  +++WSPQGTYL TFH  GIALWGG+++EK GRF HK VK+  +SP E Y++T +  + + AII+W+V T ++LRAFP    T A G       + F+WSAD KY+AR+G D+IS+YELPSM+LL+KKSL+AEGV DF WSP D +LAYWAPE  N PARVS+VE+PSR E+RQKNL  VS+C+LHW  +G +LCVKV RHSKSKKTMY NFE+FRV+E LVPVE +E K  + AFAWEP G RFA V G+  + L V+FY M GG+    E+  L TL+D+  +H+YWSP+GN  +LA +G+     NG+LEF+D   Q ++   EHF+C+++EWDPSGR   TAV QP+  S++K  MDNGY L++FQG++  E KKD F+Q  WRPRP +LL+ A+ K VVKNL+K+EK                  +++ + + EF++        A       GRR E + L  GYDSDDE+ Y+V   T + VL VKE +
Sbjct:   18 EHYADYLSDEEVEDEVMTKAHEEADFCNDFSMAVVVGGLPVVDDSKHGKLLNVVKKIFGQVGSVVD--IDMPFGDD-GNTTGFAFVEYEQEAHANDAVRTINSFALDKRHTMNVNKYEDVERYLKTPDEFVAPKVDKFVEPKNLKSWLTDPSRRDMFVLRHGT---------ETEIFWSDKGEV-ELDYAGDREKTNGKQWCMQYVLWSPQGTYLATFHPQGIALWGGDKYEKVGRFAHKKVKLAMFSPNENYLITVSETEQESAIIIWDVKTSKLLRAFPAGKPTGAKGEVVQGLMTPFKWSADDKYVARRGTDVISVYELPSMKLLEKKSLRAEGVHDFFWSPTDPILAYWAPEGNNVPARVSLVELPSRHEVRQKNLFNVSDCKLHWHPDGTFLCVKVTRHSKSKKTMYTNFELFRVQEQLVPVEMLEVKDNIVAFAWEPKGTRFAAVHGEGQQHLNVSFYDMDGGSNVAKEVTLLYTLKDKACSHLYWSPLGNNIVLAGLGEI----NGQLEFWDTTEQQSITVQEHFKCSHVEWDPSGRVVATAVCQPLDNSYYKLTMDNGYNLWTFQGKKLLEEKKDTFFQFLWRPRPRTLLSDAQYKNVVKNLKKFEKRFDQMDRFKERERLAAENAERNKKEQEFQELLQKRLITAA------GRRAEYLSLLGGYDSDDENEYIVQKHTYDDVLEVKEEV 693          
BLAST of mRNA_Ecto-sp13_S_contig581.16268.1 vs. uniprot
Match: G5A2B4_PHYSP (Eukaryotic translation initiation factor 3 subunit B n=7 Tax=Phytophthora TaxID=4783 RepID=G5A2B4_PHYSP)

HSP 1 Score: 621 bits (1602), Expect = 1.930e-212
Identity = 332/699 (47.50%), Postives = 442/699 (63.23%), Query Frame = 0
Query:   17 EELKDYMSPDEGDGDLAGFERPELNV--DLSTAVVVSNLPQVVEAKHEKLGGVVRKVFSRMGTIADDGLTHPFDKTTGLTKGFAFVNFLNPQDAKQAAATLNGWQLDKSHLIKVYPFEQLARLRSLPEEYESPEPKPFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWSEKLQTPSLCYGGEREKEAGKAWCELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEYSPCETYVMTCNFEQGDKAIIVWEVLTGQMLRAFPMATTTAADGAA-----SLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGD-VPKLEVTFYTMKGGAGK-NELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXAMSDKIQMKLEFRQQASGLSRVAEMKHRLEGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVI 706
            E   DY+S +E + ++      E +   D S +VVV  LP V E KH KL  VV+K+F ++G + D  +  PF    G T GFAFV +     A  A  T+N + LDK H + V  +E + R +  P E+ +P+   F    +  +WLAD   RD FVLR+           E E+ WS+K +   L Y G+REK   K WC  +++WSPQGTYL TFH  GIALWGG+++EK GRF HK+VK+  +SP E Y++T +  + D AII+W+V T +MLRAFP    T A G       + F+WSAD KY+AR+GKD+ISIYELPSM+LL+KKSL+AEGV DF WSP D +LAYWAPE  N PARVS+VE+PSR+E+RQKNL  VS+C+LHW   G +LCVKV RHSKSKKTMY NFE+FRV E LVPVE +E K+ + AFAWEP G RFA   G+   +L V+FY M GG+    E+  L TL+D+  +H+YWSP+GN  +LA +G+     NG+LEF+D   Q ++   EHF+C ++EWDPSGR   TAV QP+  S++K  MDNGY L++FQG++  E KKD FYQ  WRPRP +LL+  E   VVKNL+K+EK                  +++ + + EF++      R+A        RR E V L +GYDS+DES Y+V S T + VL  KE +
Sbjct:   18 EHYADYLSDEEVEDEVTSKAHEEADFCNDYSMSVVVGGLPFVDETKHGKLLNVVKKIFGQVGPVVD--IRMPFGGG-GKTTGFAFVEYEQEAHANDAVRTINNFALDKRHTMLVNKYEDIERFQKTPAEFAAPKVDKFVEPKNLKTWLADPARRDMFVLRHGS---------ETELFWSDKGEI-ELDYAGDREKLNDKQWCSQYVLWSPQGTYLATFHPQGIALWGGDKYEKVGRFAHKNVKLAVFSPNENYILTLSETEQDSAIIIWDVKTSKMLRAFPAGKPTGAKGEVVQGLMTPFKWSADDKYVARRGKDVISIYELPSMKLLEKKSLRAEGVHDFFWSPTDPILAYWAPEGNNVPARVSLVELPSRREVRQKNLFNVSDCKLHWHPNGTFLCVKVTRHSKSKKTMYTNFELFRVHEQLVPVEMLEVKESIVAFAWEPKGTRFATAHGEGQQRLNVSFYDMDGGSKSVKEVTLLYTLKDKACSHLYWSPLGNNIVLAGLGEI----NGQLEFWDATEQQSITVQEHFKCTHVEWDPSGRVVATAVCQPLDNSYYKFTMDNGYTLWTFQGKQLLEEKKDAFYQFLWRPRPRTLLSDEEYNNVVKNLKKFEKRFDQMDRLKERERLAAEKAERNRQEQEFQELLE--KRLAS----AAARRAEYVALLDGYDSEDESEYIVQSHTYDDVLETKEEV 693          
BLAST of mRNA_Ecto-sp13_S_contig581.16268.1 vs. uniprot
Match: A0A2D4C7L6_PYTIN (Eukaryotic translation initiation factor 3 subunit B n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C7L6_PYTIN)

HSP 1 Score: 620 bits (1599), Expect = 5.300e-212
Identity = 326/698 (46.70%), Postives = 443/698 (63.47%), Query Frame = 0
Query:   17 EELKDYMSPDEGDGDLAGFERPELNV--DLSTAVVVSNLPQVVEAKHEKLGGVVRKVFSRMGTIADDGLTHPFDKTTGLTKGFAFVNFLNPQDAKQAAATLNGWQLDKSHLIKVYPFEQLARLRSLPEEYESPEPKPFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWSEKLQTPSLCYGGEREKEAGKAWCELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEYSPCETYVMTCNFEQGDKAIIVWEVLTGQMLRAFPMATTTA-----ADGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGDV-PKLEVTFYTMKGGAGKNELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXAMSDKIQMKLEFRQQASGLSRVAEMKHRLEGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVI 706
            E+  DY+S +E + ++A  +  E +   D S  VVV  LP +  +KH KL  VV+K+FS++G + D  +  PF    G+T GFAFV F     A  A  T+N + LDK H + V  +E L +  + P E+ +P+   F    +  +WL D   RD F LR+           E E+ WS+K +  SL Y G+REK+ GK WC  +++WSP GTYLTTFH  G+ALW GE +EK GRF H++VK+  +SP E Y++T +  + D AI+VWEV TG++LR+FP+   T        G  + F+WSAD +++AR+GKD+IS+YELPSM+LLDKKSLKA+G+ DF WSP D VLAYWAPE  N PARVS+VE+PSR+ELRQKNL  VS+C+L W   G +L VKV RHSKSKKT++ NFE+FR+RE LVPVE +E K+ + AF++EP G RFA+V G+   +L V+FY M GG  KNEL  L TL D+P +H+YWSP GN  +LA MG+     NG LEF+D + + ++   EHF+C ++EWDPSGR   +AV QP+  S++K QMDNG+ L+SFQG++  E KKD FYQ  WRPRP +LL+  E   VVKNL+KYE+                  ++K +   EF +       V   K      R E + L  GYDS+DE  Y+V SRT + V+S  E +
Sbjct:   18 EKYADYLSDEEVEDEVATQKHEEEDFCNDFSMCVVVGGLPVIDNSKHAKLLNVVKKIFSQVGAVVD--IDMPFG-ANGMTTGFAFVEFEQEAHAADAVRTINNFALDKRHTLLVNKYEDLHKFEATPSEFVAPKIDKFVEPKNLKTWLTDSARRDMFALRHGT---------ETEIFWSDKGEI-SLDYAGDREKQNGKQWCSQYVLWSPHGTYLTTFHPQGVALWAGEHYEKVGRFAHRNVKIAVFSPNENYLITLSETEVDNAIVVWEVKTGKLLRSFPLGKPTGEKGEVVQGIMTPFKWSADDRFVARRGKDVISVYELPSMKLLDKKSLKADGIHDFFWSPTDPVLAYWAPEGNNVPARVSLVELPSRRELRQKNLFNVSDCKLQWHPNGTFLRVKVTRHSKSKKTLFTNFELFRLRESLVPVEMLEMKETIVAFSFEPKGSRFAVVHGEGNQRLNVSFYDMHGGNKKNELTLLYTLTDKPCSHLYWSPHGNNIVLAGMGE----MNGVLEFWDTDEKQSITIQEHFKCTHVEWDPSGRVVMSAVCQPIDNSYYKFQMDNGFTLWSFQGKKLLEEKKDAFYQFLWRPRPRNLLSDKEYADVVKNLKKYERRFNEMDRLKERERVAAEKAEKQRQIAEFTEL------VQARKSAARALRAEYIALLGGYDSEDEDEYIVQSRTFDDVISESEEV 692          
BLAST of mRNA_Ecto-sp13_S_contig581.16268.1 vs. uniprot
Match: A0A0P1APB3_PLAHL (Eukaryotic translation initiation factor 3 subunit B n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1APB3_PLAHL)

HSP 1 Score: 620 bits (1599), Expect = 5.480e-212
Identity = 326/699 (46.64%), Postives = 444/699 (63.52%), Query Frame = 0
Query:   17 EELKDYMSPDEGDGDLA--GFERPELNVDLSTAVVVSNLPQVVEAKHEKLGGVVRKVFSRMGTIADDGLTHPFDKTTGLTKGFAFVNFLNPQDAKQAAATLNGWQLDKSHLIKVYPFEQLARLRSLPEEYESPEPKPFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWSEKLQTPSLCYGGEREKEAGKAWCELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEYSPCETYVMTCNFEQGDKAIIVWEVLTGQMLRAFPMATTTAADGAA-----SLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGD-VPKLEVTFYTMKGGA-GKNELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXAMSDKIQMKLEFRQQASGLSRVAEMKHRLEGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVI 706
            E   +Y+S +E + ++     E  +   D S A+VV  LP V E+KH KL  VV+K+F ++G + D  +  PFD ++G T GFAF+ +     A  A  T+N + LDK H + V  +E + R    PEE+  P    F    +  +WL D   RD FVLR+           E E+ WS+K +   L Y G+REK+ GK WC  +++WSPQG+YL TFH  GIALWGGE++EK GRF HK+VK+  +SP E Y++T +  + + AII+W+V T +MLRAFP   +T   G       + F+WSAD K++AR+GKD+IS+YELPSM+LLDKKSL+AEGV DF WSP D +LAYWAPE  N PARVS+VE+PSR+E+RQKNL  VS+C+LHW   G +LCVKV RHSKSKKTM+ NFE+FRV E LVPVE +E K  + AFAWEP G RFA V G+   +L V+FY M GG+    E+  L TL D+  +H+YWSP+GN  +LA +G+     NG+LEF+DV  Q ++   EHF+C ++EWDPSGR   TAV QP+  S++K  MDNGY L++FQG++  E KK+ FYQ  WRPRP +LL+ +E   VVKNL+ +EK                  +++ + + EF++       +A        RR E + L +GYDS DES Y+V S T + VL +KE +
Sbjct:   18 EHYAEYLSDEELEDEMTTKAHEEADFANDYSMAIVVGGLPVVDESKHGKLLNVVKKIFGQVGNVVD--IQVPFD-SSGKTTGFAFIEYEQEAHANDAVRTINNFALDKRHTMIVNKYEDMERYVKTPEEFIPPTINSFVEPKNLKTWLMDPARRDMFVLRHGS---------ETEIFWSDKGEL-ELDYAGDREKKNGKQWCSQYVLWSPQGSYLATFHPQGIALWGGEKYEKVGRFAHKNVKLAVFSPHEKYLITLSETEQEAAIIIWDVQTSKMLRAFPAGKSTGVKGEVVQGLMTPFKWSADDKFVARRGKDVISVYELPSMKLLDKKSLRAEGVHDFFWSPTDPILAYWAPEGNNVPARVSLVELPSRREVRQKNLFNVSDCKLHWHPNGTFLCVKVTRHSKSKKTMFTNFELFRVHEQLVPVEMLEMKDNIVAFAWEPKGTRFATVHGEGQQRLNVSFYDMDGGSKSSKEVTLLYTLTDKACSHLYWSPLGNNIVLAGLGEI----NGQLEFWDVSEQQSITIQEHFKCTHVEWDPSGRVVATAVCQPLDNSYYKFTMDNGYTLWTFQGKQLLEEKKETFYQFLWRPRPRTLLSESEYNHVVKNLKTFEKRFDQMDRLKERERLAALNAERKREEQEFQELLDRRLAIAA------ARRAEYIALLDGYDSQDESEYIVQSHTYDDVLEIKEEV 693          
BLAST of mRNA_Ecto-sp13_S_contig581.16268.1 vs. uniprot
Match: A0A3M6VP81_9STRA (Eukaryotic translation initiation factor 3 subunit B n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VP81_9STRA)

HSP 1 Score: 618 bits (1593), Expect = 4.410e-211
Identity = 330/699 (47.21%), Postives = 442/699 (63.23%), Query Frame = 0
Query:   17 EELKDYMSPDEGDGDLA--GFERPELNVDLSTAVVVSNLPQVVEAKHEKLGGVVRKVFSRMGTIADDGLTHPFDKTTGLTKGFAFVNFLNPQDAKQAAATLNGWQLDKSHLIKVYPFEQLARLRSLPEEYESPEPKPFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWSEKLQTPSLCYGGEREKEAGKAWCELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEYSPCETYVMTCNFEQGDKAIIVWEVLTGQMLRAFPMATTTAA-----DGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGD-VPKLEVTFYTMKG-GAGKNELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXAMSDKIQMKLEFRQQASGLSRVAEMKHRLEGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVI 706
            E   DY+S +E + ++     E  +   D S AVVV  LP V E+KH KL  VV+K+F ++G + D  +  PFD + G T GFAFV +     AK A  T+N + LDK H + V  +E + R      E+ +P+ + F    +  +WL D   RD FVLR+           E E+ WS+K +     Y G+REK  GK WC  +++WSPQGTYL TFH  GIALWGG+++EK GRF HK+V    +SP E Y++T +  + D AII+W+V T +MLRAFP    T A      G  + F+WSA  KY+AR+G D+ISIYELPSM+LL+KKSL+AEGV DF WSP D +LAYWAPE  N PARVS+VE+PSR+E+RQKNL  VS+C+LHW   G +LCVKV RHSKSKKTM+ NFE+FR++E LVPVE +E K  + AFAWEP G RFA V G+   +L V+FY M G      E+  L TL+D+  +H+YWSP+GN  +LA +G+     NG+LEF+D   Q ++   EHF+C ++EWDPSGR   TAV QP+  S++K  MDNGY L++FQG++  E KK++FYQ  WRPRP +LL+ AE KKVVKNL+KYEK                  +++ +   EF++    L   A +      RR E + L +GYDS+DE+ Y+V S T + VL  KE I
Sbjct:   18 EHYADYLSDEEAEDEVTIKANEEEDFCNDFSMAVVVGGLPVVDESKHGKLLNVVKKIFGQVGAVVD--IHMPFDGS-GKTTGFAFVEYEQEAHAKDAVRTINNFALDKRHTMIVNKYEDIERYEKTTTEFVAPKVEKFVEPKNLQTWLMDPARRDMFVLRHGS---------ETEIFWSDKGEI-EFVYAGDREKTNGKQWCSQYVLWSPQGTYLATFHPQGIALWGGDKYEKVGRFAHKNVTRAVFSPHENYLITVSETEQDSAIIIWDVKTSKMLRAFPAGKPTGAKNEVVQGLMTPFKWSAGDKYVARRGNDVISIYELPSMKLLEKKSLRAEGVHDFFWSPTDLILAYWAPEGNNVPARVSLVELPSRREVRQKNLFNVSDCKLHWHPNGTFLCVKVTRHSKSKKTMFTNFELFRLQEQLVPVEMLEIKDNIVAFAWEPKGTRFATVHGEGQQRLSVSFYDMDGENKSTKEVTLLYTLKDKACSHLYWSPLGNNIVLAGLGEI----NGQLEFWDATEQQSITVQEHFKCTHVEWDPSGRVVATAVCQPLDNSYYKFTMDNGYTLWTFQGKQLLEEKKESFYQFLWRPRPRTLLSDAEYKKVVKNLKKYEKRFDQMDRLKERERQAAKNAERNRKVQEFQELLQRLLAAAAV------RRGEYIALLDGYDSEDENEYIVQSHTYDDVLESKEEI 693          
BLAST of mRNA_Ecto-sp13_S_contig581.16268.1 vs. uniprot
Match: A0A5D6XPM0_9STRA (Eukaryotic translation initiation factor 3 subunit B n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XPM0_9STRA)

HSP 1 Score: 616 bits (1588), Expect = 2.960e-210
Identity = 326/700 (46.57%), Postives = 441/700 (63.00%), Query Frame = 0
Query:   21 DYMSPDEGDGDLAGFERPELNV---DLSTAVVVSNLPQVVEAKHEKLGGVVRKVFSRMGTIADDGLTHPFDKTTGLTKGFAFVNFLNPQDAKQAAATLNGWQLDKSHLIKVYPFEQLARLRSLPEEYESPEPKPFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWSEKLQTPSLCYGGEREKEAGKAWCELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEYSPCETYVMTCNFEQGDKAIIVWEVLTGQMLRAFPMATTTAADGAA-----SLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGDVP-KLEVTFYTMKGGAG-----KNELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXAMSDKIQMKLEFRQQASGLSRVAEMKHRLEGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVI 706
            DYMS +E + D A  ++ + +    D S  VVV  LP V  AKH KL  V+ K+FS++G + D  L+ PF K+ G T GFA V +     A +A  T+NG+ LDK H + V  +  + + +S PE +  P+ + F    +  +WL D   RD FVLR+           E E+ WS+K +  SL Y G REK  GK WC  +++WSP GTYL TFH PG+ALW GE++EK GRF HK+VK+  +SP ETY++T +    + AIIVW+V +G++LR FP    T   G       + F+WSAD +++AR+GKD++S+YELPSM+LL+KKSLKA+GV DF WSP D +LAYWAPE  N PARVS+VE+PSR E+RQKNL  VS+C+L+W   G +L VKV RHSKSKKT++ NFE+FRVREPLVPVE +E K  + AFAWEP G RFA V G+   +L V+FY M GGA        E+  L TL ++P +H+YWSP+GN  +LA +G+     NG LEF+D + + ++   EHF+C ++EWDPSGR   T+V QP+  S++K QMDNGY L+SFQG+   E KKD FYQ  WRPRP SLL+  E   VVKNL+KYEK                  ++K +++ EF+       R       ++  R   V L  GYDS+DE  Y+V++   +VVLS  E +
Sbjct:   23 DYMSDEEPE-DAAVTQQHDEDAFLRDFSMCVVVGGLPVVDSAKHAKLLAVLTKIFSQVGAVVD--LSMPFGKS-GSTTGFALVAYDQEAHANEAVRTINGFALDKRHTMLVNKYSDVEKFQSTPETFAEPKVEKFAEPKNYKNWLMDSARRDMFVLRHGT---------ETELFWSDKGEI-SLEYDGAREKVNGKQWCSQYVLWSPHGTYLATFHQPGLALWAGEKYEKVGRFAHKNVKIAVFSPNETYLLTVSETDAENAIIVWDVKSGKILRTFPAGKPTGVKGEVVQGLQTPFKWSADDRFVARRGKDVVSVYELPSMKLLEKKSLKADGVHDFFWSPTDPILAYWAPEGNNVPARVSLVELPSRTEIRQKNLFNVSDCKLNWHPNGTFLGVKVTRHSKSKKTLFTNFEMFRVREPLVPVEMLEMKDSIVAFAWEPKGTRFATVHGESQLRLNVSFYDMNGGAAGSKAASTEITLLYTLTEKPCSHLYWSPLGNNIVLAGLGE----MNGSLEFWDTDERQSITAQEHFKCTHVEWDPSGRVVATSVCQPLDNSYYKFQMDNGYNLWSFQGKLLKEEKKDAFYQFLWRPRPRSLLSDKEYANVVKNLKKYEKRFNEMDRLKERERLAAIQAEKNRLRQEFQDLVEARVRA------VQSARATYVSLLGGYDSEDEDEYIVETHVHDVVLSKAEEV 698          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig581.16268.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKV7_ECTSI0.000e+097.88Eukaryotic translation initiation factor 3 subunit... [more]
A0A835YNH6_9STRA7.050e-29858.49Eukaryotic translation initiation factor 3 subunit... [more]
A0A6H5KAX0_9PHAE9.940e-23184.20eIF2A domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A8K1FRG0_PYTOL1.260e-21547.64Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
M4BHP4_HYAAE1.220e-21247.07Eukaryotic translation initiation factor 3 subunit... [more]
G5A2B4_PHYSP1.930e-21247.50Eukaryotic translation initiation factor 3 subunit... [more]
A0A2D4C7L6_PYTIN5.300e-21246.70Eukaryotic translation initiation factor 3 subunit... [more]
A0A0P1APB3_PLAHL5.480e-21246.64Eukaryotic translation initiation factor 3 subunit... [more]
A0A3M6VP81_9STRA4.410e-21147.21Eukaryotic translation initiation factor 3 subunit... [more]
A0A5D6XPM0_9STRA2.960e-21046.57Eukaryotic translation initiation factor 3 subunit... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 47..129
e-value: 5.5E-4
score: 29.2
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 68..122
e-value: 2.3E-6
score: 27.3
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 46..133
score: 13.106
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 45..129
e-value: 5.7E-18
score: 66.7
IPR011400Eukaryotic translation initiation factor 3 subunit BPIRSFPIRSF036424Transl_init_eIF3bcoord: 4..707
e-value: 7.4E-203
score: 672.0
IPR011400Eukaryotic translation initiation factor 3 subunit BPANTHERPTHR14068EUKARYOTIC TRANSLATION INITIATION FACTOR 3 EIF3 -RELATEDcoord: 28..705
IPR011400Eukaryotic translation initiation factor 3 subunit BHAMAPMF_03001eIF3bcoord: 41..656
score: 76.349
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 407..617
e-value: 1.7E-5
score: 26.0
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 195..388
e-value: 1.3E-9
score: 39.4
IPR013979Translation initiation factor, beta propellor-like domainPFAMPF08662eIF2Acoord: 387..595
e-value: 2.4E-44
score: 151.6
NoneNo IPR availablePANTHERPTHR14068:SF0EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT Bcoord: 28..705
NoneNo IPR availableSUPERFAMILY82171DPP6 N-terminal domain-likecoord: 220..558
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 43..131

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig581contigEcto-sp13_S_contig581:15005..22754 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig581.16268.1mRNA_Ecto-sp13_S_contig581.16268.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig581 14186..22778 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig581.16268.1 ID=prot_Ecto-sp13_S_contig581.16268.1|Name=mRNA_Ecto-sp13_S_contig581.16268.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=708bp
MGDQYYVDEYDEEPDMEELKDYMSPDEGDGDLAGFERPELNVDLSTAVVV
SNLPQVVEAKHEKLGGVVRKVFSRMGTIADDGLTHPFDKTTGLTKGFAFV
NFLNPQDAKQAAATLNGWQLDKSHLIKVYPFEQLARLRSLPEEYESPEPK
PFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWSEKLQTPS
LCYGGEREKEAGKAWCELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGR
FPHKDVKVVEYSPCETYVMTCNFEQGDKAIIVWEVLTGQMLRAFPMATTT
AADGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDF
EWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQ
DEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAW
EPAGDRFALVLGDVPKLEVTFYTMKGGAGKNELQELETLQDRPFNHIYWS
PMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSG
RYACTAVSQPVTGSHWKAQMDNGYQLFSFQGERFHEFKKDNFYQIQWRPR
PASLLTSAEKKKVVKNLRKYEKRFEKDDREKDRRKAREAMSDKIQMKLEF
RQQASGLSRVAEMKHRLEGRRQELVDLRNGYDSDDESHYVVDSRTGEVVL
SVKEVIQ*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR011400EIF3B
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR013979TIF_beta_prop-like
IPR035979RBD_domain_sf