mRNA_Ecto-sp13_S_contig581.16268.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig581.16268.1 vs. uniprot
Match: D7FKV7_ECTSI (Eukaryotic translation initiation factor 3 subunit B n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKV7_ECTSI) HSP 1 Score: 1373 bits (3555), Expect = 0.000e+0 Identity = 692/707 (97.88%), Postives = 695/707 (98.30%), Query Frame = 1
Query: 25 MGDQYYVDEYDEEPDMEELKDYMSPDEGDGDLAGFERPELNVDLSTAVVVSNLPQVVEAKHEKLGGVVRKVFSRMGTIADDGLTHPFDKTTGLTKGFAFVNFLNPQDAKQAAATLNGWQLDKSHLIKVYPFEQLARLRSLPEEYESPEPKPFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWSEKLQTPSLCYGGEREKEAGKAWCELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEYSPCETYVMTCNFEQGDKAIIVWEVLTGQMLRAFPMATTTAADGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGDVPKLEVTFYTMKGGAGKNELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXAMSDKIQMKLEFRQQASGLSRVAEMKHRLEGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ 2145
MGDQYYVDEYDEEPDM+ELKDYMSPDEGDGDLAGFERPELNVDLSTAVVVSNLPQVVEAKHEKLGGVVRKVFS+MGTIADDGLTHPFDKTTGLTKGFAFVNFLNPQDAKQAAATLNGWQLDKSHLIKVYPFEQLARLRSLPEEYESPEPKPFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWSEKLQTPSLCYGGEREKEAGKAWCELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVE+SPCETYVMTCNFEQGDKAIIVWEVLTGQMLRAFPMATTTAADGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGDVPKLEVTFYTMKGGAGKNELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXX KIQMKLEFRQQ VAEM RLEGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ
Sbjct: 1 MGDQYYVDEYDEEPDMDELKDYMSPDEGDGDLAGFERPELNVDLSTAVVVSNLPQVVEAKHEKLGGVVRKVFSKMGTIADDGLTHPFDKTTGLTKGFAFVNFLNPQDAKQAAATLNGWQLDKSHLIKVYPFEQLARLRSLPEEYESPEPKPFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWSEKLQTPSLCYGGEREKEAGKAWCELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEFSPCETYVMTCNFEQGDKAIIVWEVLTGQMLRAFPMATTTAADGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGDVPKLEVTFYTMKGGAGKNELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXXXXXKIQMKLEFRQQ------VAEMNLRLEGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ 701
BLAST of mRNA_Ecto-sp13_S_contig581.16268.1 vs. uniprot
Match: A0A835YNH6_9STRA (Eukaryotic translation initiation factor 3 subunit B n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNH6_9STRA) HSP 1 Score: 839 bits (2167), Expect = 2.320e-293 Identity = 403/689 (58.49%), Postives = 514/689 (74.60%), Query Frame = 1
Query: 79 LKDYMSPDEGDGD-LAGFERPELNVDLSTAVVVSNLPQVVEAKHEKLGGVVRKVFSRMGTIADDGLTHPFDKTTGLTKGFAFVNFLNPQDAKQAAATLNGWQLDKSHLIKVYPFEQLARLRSLPEEYESPEPKPFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWSEKLQTPSLCYGGEREKEAGKAWCELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEYSPCETYVMTCNFEQGDKAIIVWEVLTGQMLRAFPMATTTAADGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDN--VLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLG-DVPKLEVTFYTMKGGAGKNELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXAMSDKIQMKLEFRQQASGLSRVAEMKHRLEGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVK 2133
L D+MS ++ D D L F+RP+L +D STAVVV N+P+V K KL GVV K+F++ GTI ++G+ P D G + GF F+NF ++A+ A A +N +QLDK H V+P+E+L +L S+P+EY P P ++PR D SWLADE HRDQFV+RYS P G HE V W E+ P+ CYGGEREK GKAW EL++ WSPQGTYL + H+PGIALWGGE+FEKQGRF H +VKV+E+SPCE Y++TCNF+ ++A+IVWEV +G +LR FP G SLF+WS DG+++ARKG+D +SIY LPSM LLDKKSLKA G++DFEWSP + LAYWAPEQ N PARVSVVEIPSRK+LRQKNL VSECRLHWQ+EG YLCVKVLRHSK+KKTMYNNFE+FRV +P VPVE +E + V AFAWEP GDRFA+V G ++P++ +TFYTMKGGA NEL E+ TL+D+P NH+YWSP G ++AAMG++ G NG L FYDVE+++ L+++EHFR +Y+EWDPSGRY CTAV+QP+ GSHWKAQMDNGY+L+SFQGE+F+E KDNFYQ+ WRPRP SLL+S EKKKVV+NL+KYE+ AM+ K++ K FR + VA + RL R ELV+LR+GYDS DE+++ V++RT EV++SVK
Sbjct: 31 LADWMSEEDPDDDGLGDFQRPQLRMDFSTAVVVDNIPRVPAEKLVKLRGVVTKLFNQCGTIQENGICIPTD-AAGESLGFMFINFTTAEEARSAVAVINNYQLDKRHQFHVFPYERLDQLASVPDEYAPPPPMEYRPRPDLGSWLADENHRDQFVIRYSMPGVGGTPAHETIVNWCERFAPPTQCYGGEREKAQGKAWVELYVTWSPQGTYLASLHIPGIALWGGEQFEKQGRFAHSNVKVIEFSPCENYLLTCNFDTTERAMIVWEVRSGAVLRTFPARAFEG--GPPSLFKWSPDGRFIARKGRDCVSIYALPSMALLDKKSLKATGIADFEWSPSTSSCALAYWAPEQDNTPARVSVVEIPSRKDLRQKNLFNVSECRLHWQNEGTYLCVKVLRHSKTKKTMYNNFELFRVADPQVPVEMLELRSNVIAFAWEPTGDRFAIVHGTELPRVNITFYTMKGGASGNELAEVVTLEDKPVNHLYWSPQGQFIVMAAMGENTGGTNGYLNFYDVESKTILRESEHFRLSYLEWDPSGRYICTAVNQPIDGSHWKAQMDNGYRLWSFQGEQFYELTKDNFYQVLWRPRPVSLLSSEEKKKVVRNLKKYERRFERADKIASRRKARAAMAGKVRQKQAFR------AHVAARRERLLARHHELVELRDGYDSHDEANFFVETRTREVIMSVK 710
BLAST of mRNA_Ecto-sp13_S_contig581.16268.1 vs. uniprot
Match: A0A6H5KAX0_9PHAE (eIF2A domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAX0_9PHAE) HSP 1 Score: 655 bits (1689), Expect = 1.620e-226 Identity = 341/405 (84.20%), Postives = 347/405 (85.68%), Query Frame = 1
Query: 931 DGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGDVPKLEVTFYTMKGGAGKNELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXAMSDKIQMKLEFRQQASGLSRVAEMKHRLEGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ 2145
DGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHW QVAAFAWEPAGDRFALVLGDVPKLEVTFYTMKGGAGKNELQ LETLQDRPFNHIYWSP+GNIC+LAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTG HWKAQMDNGYQLFSFQGERFHEFKKD+FYQIQWRPRPASLLTSAEKKKVVKNLRKY+K XXXXXX AM+DKIQMKLEFRQQASGLSRVA+MK RLE RRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ
Sbjct: 14 DGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHW--------------------------------------------QVAAFAWEPAGDRFALVLGDVPKLEVTFYTMKGGAGKNELQVLETLQDRPFNHIYWSPVGNICILAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGGHWKAQMDNGYQLFSFQGERFHEFKKDHFYQIQWRPRPASLLTSAEKKKVVKNLRKYDKRFEKDDRXXXXXXAREAMADKIQMKLEFRQQASGLSRVADMKLRLEARRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ 374
BLAST of mRNA_Ecto-sp13_S_contig581.16268.1 vs. uniprot
Match: A0A8K1FRG0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FRG0_PYTOL) HSP 1 Score: 629 bits (1623), Expect = 1.270e-211 Identity = 333/701 (47.50%), Postives = 450/701 (64.19%), Query Frame = 1
Query: 67 DMEELKDYMSPDEGDGDLAGFERPELNV--DLSTAVVVSNLPQVVEAKHEKLGGVVRKVFSRMGTIADDGLTHPFDKTTGLTKGFAFVNFLNPQDAKQAAATLNGWQLDKSHLIKVYPFEQLARLRSLPEEYESPEPKPFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWSEKLQTPSLCYGGEREKEAGKAWCELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEYSPCETYVMTCNFEQGDKAIIVWEVLTGQMLRAFPMATTTAADGAA-----SLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGDV-PKLEVTFYTMKGGAGKNELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXAMSDKIQMKLEFRQQASGLSRVAEMKHRLEGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ 2145
+ E+ ++++S +E + ++ + E + D S VVV LP V AKH KL VV+K+FS++GT+ D + PF G T GFAFV F A A T+N + LDK H + V + L + + PEE+ +P+ + F + +WL D RD FVLR+S E E+ WS+K + +L Y G REK GK WC +++WSPQGTYL TFH GIALWGG+ +EK GRF HK+VK+ +SP E Y++T + + AII+W+V T +MLRAFP T A G + F+WSAD +++AR+GKD+IS+YELPSM+LLDKKSLKA+GV DF WSP D +LAYWAPE N PARVS+VE+PSR+E+RQKNL VS+C+L W G +L VKV RHSKSKKT++ NFEIFRV E LVPVE+ E K + AF++EP G RFA+V G+ +L V+FY M GGA KNEL L TL D+P +H+YWSP GN +LA +G+ NG LEF+D + + ++ EHF+C ++EWDPSGR +AV QP+ S++K QMDNG+ L++FQG++ E KKD FYQ WRPRP +LL+ E K VVKNL+KYEK ++K + EF + VA RRQE + L NGYDS+D+ Y+V++R+ + VLS KE +Q
Sbjct: 16 EAEKYEEFLSDEEVEDEVTTQKHEEEDFCNDYSMCVVVGGLPVVDNAKHGKLLNVVKKIFSQVGTVVD--IDMPF-AANGNTNGFAFVEFEQDTHANDAVRTINNFALDKRHTLLVNKYTDLEKYQKTPEEFVAPKIEKFVEPKNLKTWLMDSARRDMFVLRHST---------ETEIFWSDKGEV-TLDYDGAREKTNGKQWCSQYVLWSPQGTYLATFHPQGIALWGGDNYEKVGRFAHKNVKIAVFSPQENYLVTLSETDTENAIIIWDVKTSKMLRAFPAGKPTGAKGEVVQGLMTPFKWSADDRFVARRGKDVISVYELPSMKLLDKKSLKADGVHDFFWSPTDPILAYWAPEGNNVPARVSLVELPSRREVRQKNLFNVSDCKLQWHPNGTFLNVKVTRHSKSKKTLFTNFEIFRVHESLVPVESFEMKDTIVAFSFEPKGSRFAIVHGEGNQRLNVSFYDMNGGAKKNELTLLYTLTDKPCSHLYWSPHGNNIVLAGLGEI----NGVLEFWDTDEKQSITIQEHFKCTHVEWDPSGRVVSSAVCQPIDNSYYKFQMDNGFTLWTFQGKKLLEEKKDAFYQFLWRPRPRTLLSDKEYKDVVKNLKKYEKRFNEMDRMKERERIAAEKAEKQRQHQEF------VDLVAARAETARARRQEYIALLNGYDSEDDDEYIVETRSYDDVLSEKEEVQ 693
BLAST of mRNA_Ecto-sp13_S_contig581.16268.1 vs. uniprot
Match: M4BHP4_HYAAE (Eukaryotic translation initiation factor 3 subunit B n=15 Tax=Peronosporaceae TaxID=4777 RepID=M4BHP4_HYAAE) HSP 1 Score: 623 bits (1606), Expect = 1.190e-208 Identity = 329/701 (46.93%), Postives = 445/701 (63.48%), Query Frame = 1
Query: 67 DMEELKDYMSPDEGDGDLA--GFERPELNVDLSTAVVVSNLPQVVEAKHEKLGGVVRKVFSRMGTIADDGLTHPFDKTTGLTKGFAFVNFLNPQDAKQAAATLNGWQLDKSHLIKVYPFEQLARLRSLPEEYESPEPKPFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWSEKLQTPSLCYGGEREKEAGKAWCELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEYSPCETYVMTCNFEQGDKAIIVWEVLTGQMLRAFPMATTTAADGAA-----SLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGDVPK-LEVTFYTMKGGAG-KNELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXAMSDKIQMKLEFRQQASGLSRVAEMKHRLEGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVI 2142
+ E DY+S +E + ++ E + D S AVVV LP V ++KH KL VV+K+F ++G++ D + PF G T GFAFV + A A T+N + LDK H + V +E + R P+E+ +P+ F + SWL D RD FVLR+ E E+ WS+K + L Y G+REK GK WC +++WSPQGTYL TFH GIALWGG+++EK GRF HK VK+ +SP E Y++T + + + AII+W+V T ++LRAFP T A G + F+WSAD KY+AR+G D+IS+YELPSM+LL+KKSL+AEGV DF WSP D +LAYWAPE N PARVS+VE+PSR E+RQKNL VS+C+LHW +G +LCVKV RHSKSKKTMY NFE+FRV+E LVPVE +E K + AFAWEP G RFA V G+ + L V+FY M GG+ E+ L TL+D+ +H+YWSP+GN +LA +G+ NG+LEF+D Q ++ EHF+C+++EWDPSGR TAV QP+ S++K MDNGY L++FQG++ E KKD F+Q WRPRP +LL+ A+ K VVKNL+K+EK +++ + + EF++ A GRR E + L GYDSDDE+ Y+V T + VL VKE +
Sbjct: 16 EAEHYADYLSDEEVEDEVMTKAHEEADFCNDFSMAVVVGGLPVVDDSKHGKLLNVVKKIFGQVGSVVD--IDMPFGDD-GNTTGFAFVEYEQEAHANDAVRTINSFALDKRHTMNVNKYEDVERYLKTPDEFVAPKVDKFVEPKNLKSWLTDPSRRDMFVLRHGT---------ETEIFWSDKGEV-ELDYAGDREKTNGKQWCMQYVLWSPQGTYLATFHPQGIALWGGDKYEKVGRFAHKKVKLAMFSPNENYLITVSETEQESAIIIWDVKTSKLLRAFPAGKPTGAKGEVVQGLMTPFKWSADDKYVARRGTDVISVYELPSMKLLEKKSLRAEGVHDFFWSPTDPILAYWAPEGNNVPARVSLVELPSRHEVRQKNLFNVSDCKLHWHPDGTFLCVKVTRHSKSKKTMYTNFELFRVQEQLVPVEMLEVKDNIVAFAWEPKGTRFAAVHGEGQQHLNVSFYDMDGGSNVAKEVTLLYTLKDKACSHLYWSPLGNNIVLAGLGEI----NGQLEFWDTTEQQSITVQEHFKCSHVEWDPSGRVVATAVCQPLDNSYYKLTMDNGYNLWTFQGKKLLEEKKDTFFQFLWRPRPRTLLSDAQYKNVVKNLKKFEKRFDQMDRFKERERLAAENAERNKKEQEFQELLQKRLITAA------GRRAEYLSLLGGYDSDDENEYIVQKHTYDDVLEVKEEV 693
BLAST of mRNA_Ecto-sp13_S_contig581.16268.1 vs. uniprot
Match: G5A2B4_PHYSP (Eukaryotic translation initiation factor 3 subunit B n=7 Tax=Phytophthora TaxID=4783 RepID=G5A2B4_PHYSP) HSP 1 Score: 621 bits (1602), Expect = 1.870e-208 Identity = 332/701 (47.36%), Postives = 443/701 (63.20%), Query Frame = 1
Query: 67 DMEELKDYMSPDEGDGDLAGFERPELNV--DLSTAVVVSNLPQVVEAKHEKLGGVVRKVFSRMGTIADDGLTHPFDKTTGLTKGFAFVNFLNPQDAKQAAATLNGWQLDKSHLIKVYPFEQLARLRSLPEEYESPEPKPFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWSEKLQTPSLCYGGEREKEAGKAWCELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEYSPCETYVMTCNFEQGDKAIIVWEVLTGQMLRAFPMATTTAADGAA-----SLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGD-VPKLEVTFYTMKGGAGK-NELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXAMSDKIQMKLEFRQQASGLSRVAEMKHRLEGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVI 2142
+ E DY+S +E + ++ E + D S +VVV LP V E KH KL VV+K+F ++G + D + PF G T GFAFV + A A T+N + LDK H + V +E + R + P E+ +P+ F + +WLAD RD FVLR+ E E+ WS+K + L Y G+REK K WC +++WSPQGTYL TFH GIALWGG+++EK GRF HK+VK+ +SP E Y++T + + D AII+W+V T +MLRAFP T A G + F+WSAD KY+AR+GKD+ISIYELPSM+LL+KKSL+AEGV DF WSP D +LAYWAPE N PARVS+VE+PSR+E+RQKNL VS+C+LHW G +LCVKV RHSKSKKTMY NFE+FRV E LVPVE +E K+ + AFAWEP G RFA G+ +L V+FY M GG+ E+ L TL+D+ +H+YWSP+GN +LA +G+ NG+LEF+D Q ++ EHF+C ++EWDPSGR TAV QP+ S++K MDNGY L++FQG++ E KKD FYQ WRPRP +LL+ E VVKNL+K+EK +++ + + EF++ R+A RR E V L +GYDS+DES Y+V S T + VL KE +
Sbjct: 16 EAEHYADYLSDEEVEDEVTSKAHEEADFCNDYSMSVVVGGLPFVDETKHGKLLNVVKKIFGQVGPVVD--IRMPFGGG-GKTTGFAFVEYEQEAHANDAVRTINNFALDKRHTMLVNKYEDIERFQKTPAEFAAPKVDKFVEPKNLKTWLADPARRDMFVLRHGS---------ETELFWSDKGEI-ELDYAGDREKLNDKQWCSQYVLWSPQGTYLATFHPQGIALWGGDKYEKVGRFAHKNVKLAVFSPNENYILTLSETEQDSAIIIWDVKTSKMLRAFPAGKPTGAKGEVVQGLMTPFKWSADDKYVARRGKDVISIYELPSMKLLEKKSLRAEGVHDFFWSPTDPILAYWAPEGNNVPARVSLVELPSRREVRQKNLFNVSDCKLHWHPNGTFLCVKVTRHSKSKKTMYTNFELFRVHEQLVPVEMLEVKESIVAFAWEPKGTRFATAHGEGQQRLNVSFYDMDGGSKSVKEVTLLYTLKDKACSHLYWSPLGNNIVLAGLGEI----NGQLEFWDATEQQSITVQEHFKCTHVEWDPSGRVVATAVCQPLDNSYYKFTMDNGYTLWTFQGKQLLEEKKDAFYQFLWRPRPRTLLSDEEYNNVVKNLKKFEKRFDQMDRLKERERLAAEKAERNRQEQEFQELLE--KRLAS----AAARRAEYVALLDGYDSEDESEYIVQSHTYDDVLETKEEV 693
BLAST of mRNA_Ecto-sp13_S_contig581.16268.1 vs. uniprot
Match: A0A2D4C7L6_PYTIN (Eukaryotic translation initiation factor 3 subunit B n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C7L6_PYTIN) HSP 1 Score: 620 bits (1599), Expect = 5.090e-208 Identity = 326/700 (46.57%), Postives = 444/700 (63.43%), Query Frame = 1
Query: 67 DMEELKDYMSPDEGDGDLAGFERPELNV--DLSTAVVVSNLPQVVEAKHEKLGGVVRKVFSRMGTIADDGLTHPFDKTTGLTKGFAFVNFLNPQDAKQAAATLNGWQLDKSHLIKVYPFEQLARLRSLPEEYESPEPKPFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWSEKLQTPSLCYGGEREKEAGKAWCELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEYSPCETYVMTCNFEQGDKAIIVWEVLTGQMLRAFPMATTTA-----ADGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGDV-PKLEVTFYTMKGGAGKNELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXAMSDKIQMKLEFRQQASGLSRVAEMKHRLEGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVI 2142
+ E+ DY+S +E + ++A + E + D S VVV LP + +KH KL VV+K+FS++G + D + PF G+T GFAFV F A A T+N + LDK H + V +E L + + P E+ +P+ F + +WL D RD F LR+ E E+ WS+K + SL Y G+REK+ GK WC +++WSP GTYLTTFH G+ALW GE +EK GRF H++VK+ +SP E Y++T + + D AI+VWEV TG++LR+FP+ T G + F+WSAD +++AR+GKD+IS+YELPSM+LLDKKSLKA+G+ DF WSP D VLAYWAPE N PARVS+VE+PSR+ELRQKNL VS+C+L W G +L VKV RHSKSKKT++ NFE+FR+RE LVPVE +E K+ + AF++EP G RFA+V G+ +L V+FY M GG KNEL L TL D+P +H+YWSP GN +LA MG+ NG LEF+D + + ++ EHF+C ++EWDPSGR +AV QP+ S++K QMDNG+ L+SFQG++ E KKD FYQ WRPRP +LL+ E VVKNL+KYE+ ++K + EF + V K R E + L GYDS+DE Y+V SRT + V+S E +
Sbjct: 16 EAEKYADYLSDEEVEDEVATQKHEEEDFCNDFSMCVVVGGLPVIDNSKHAKLLNVVKKIFSQVGAVVD--IDMPFG-ANGMTTGFAFVEFEQEAHAADAVRTINNFALDKRHTLLVNKYEDLHKFEATPSEFVAPKIDKFVEPKNLKTWLTDSARRDMFALRHGT---------ETEIFWSDKGEI-SLDYAGDREKQNGKQWCSQYVLWSPHGTYLTTFHPQGVALWAGEHYEKVGRFAHRNVKIAVFSPNENYLITLSETEVDNAIVVWEVKTGKLLRSFPLGKPTGEKGEVVQGIMTPFKWSADDRFVARRGKDVISVYELPSMKLLDKKSLKADGIHDFFWSPTDPVLAYWAPEGNNVPARVSLVELPSRRELRQKNLFNVSDCKLQWHPNGTFLRVKVTRHSKSKKTLFTNFELFRLRESLVPVEMLEMKETIVAFSFEPKGSRFAVVHGEGNQRLNVSFYDMHGGNKKNELTLLYTLTDKPCSHLYWSPHGNNIVLAGMGE----MNGVLEFWDTDEKQSITIQEHFKCTHVEWDPSGRVVMSAVCQPIDNSYYKFQMDNGFTLWSFQGKKLLEEKKDAFYQFLWRPRPRNLLSDKEYADVVKNLKKYERRFNEMDRLKERERVAAEKAEKQRQIAEFTEL------VQARKSAARALRAEYIALLGGYDSEDEDEYIVQSRTFDDVISESEEV 692
BLAST of mRNA_Ecto-sp13_S_contig581.16268.1 vs. uniprot
Match: A0A0P1APB3_PLAHL (Eukaryotic translation initiation factor 3 subunit B n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1APB3_PLAHL) HSP 1 Score: 620 bits (1599), Expect = 5.270e-208 Identity = 326/701 (46.50%), Postives = 445/701 (63.48%), Query Frame = 1
Query: 67 DMEELKDYMSPDEGDGDLA--GFERPELNVDLSTAVVVSNLPQVVEAKHEKLGGVVRKVFSRMGTIADDGLTHPFDKTTGLTKGFAFVNFLNPQDAKQAAATLNGWQLDKSHLIKVYPFEQLARLRSLPEEYESPEPKPFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWSEKLQTPSLCYGGEREKEAGKAWCELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEYSPCETYVMTCNFEQGDKAIIVWEVLTGQMLRAFPMATTTAADGAA-----SLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGD-VPKLEVTFYTMKGGA-GKNELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXAMSDKIQMKLEFRQQASGLSRVAEMKHRLEGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVI 2142
+ E +Y+S +E + ++ E + D S A+VV LP V E+KH KL VV+K+F ++G + D + PFD ++G T GFAF+ + A A T+N + LDK H + V +E + R PEE+ P F + +WL D RD FVLR+ E E+ WS+K + L Y G+REK+ GK WC +++WSPQG+YL TFH GIALWGGE++EK GRF HK+VK+ +SP E Y++T + + + AII+W+V T +MLRAFP +T G + F+WSAD K++AR+GKD+IS+YELPSM+LLDKKSL+AEGV DF WSP D +LAYWAPE N PARVS+VE+PSR+E+RQKNL VS+C+LHW G +LCVKV RHSKSKKTM+ NFE+FRV E LVPVE +E K + AFAWEP G RFA V G+ +L V+FY M GG+ E+ L TL D+ +H+YWSP+GN +LA +G+ NG+LEF+DV Q ++ EHF+C ++EWDPSGR TAV QP+ S++K MDNGY L++FQG++ E KK+ FYQ WRPRP +LL+ +E VVKNL+ +EK +++ + + EF++ +A RR E + L +GYDS DES Y+V S T + VL +KE +
Sbjct: 16 EAEHYAEYLSDEELEDEMTTKAHEEADFANDYSMAIVVGGLPVVDESKHGKLLNVVKKIFGQVGNVVD--IQVPFD-SSGKTTGFAFIEYEQEAHANDAVRTINNFALDKRHTMIVNKYEDMERYVKTPEEFIPPTINSFVEPKNLKTWLMDPARRDMFVLRHGS---------ETEIFWSDKGEL-ELDYAGDREKKNGKQWCSQYVLWSPQGSYLATFHPQGIALWGGEKYEKVGRFAHKNVKLAVFSPHEKYLITLSETEQEAAIIIWDVQTSKMLRAFPAGKSTGVKGEVVQGLMTPFKWSADDKFVARRGKDVISVYELPSMKLLDKKSLRAEGVHDFFWSPTDPILAYWAPEGNNVPARVSLVELPSRREVRQKNLFNVSDCKLHWHPNGTFLCVKVTRHSKSKKTMFTNFELFRVHEQLVPVEMLEMKDNIVAFAWEPKGTRFATVHGEGQQRLNVSFYDMDGGSKSSKEVTLLYTLTDKACSHLYWSPLGNNIVLAGLGEI----NGQLEFWDVSEQQSITIQEHFKCTHVEWDPSGRVVATAVCQPLDNSYYKFTMDNGYTLWTFQGKQLLEEKKETFYQFLWRPRPRTLLSESEYNHVVKNLKTFEKRFDQMDRLKERERLAALNAERKREEQEFQELLDRRLAIAA------ARRAEYIALLDGYDSQDESEYIVQSHTYDDVLEIKEEV 693
BLAST of mRNA_Ecto-sp13_S_contig581.16268.1 vs. uniprot
Match: A0A3M6VP81_9STRA (Eukaryotic translation initiation factor 3 subunit B n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VP81_9STRA) HSP 1 Score: 618 bits (1593), Expect = 4.190e-207 Identity = 330/701 (47.08%), Postives = 443/701 (63.20%), Query Frame = 1
Query: 67 DMEELKDYMSPDEGDGDLA--GFERPELNVDLSTAVVVSNLPQVVEAKHEKLGGVVRKVFSRMGTIADDGLTHPFDKTTGLTKGFAFVNFLNPQDAKQAAATLNGWQLDKSHLIKVYPFEQLARLRSLPEEYESPEPKPFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWSEKLQTPSLCYGGEREKEAGKAWCELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEYSPCETYVMTCNFEQGDKAIIVWEVLTGQMLRAFPMATTTAA-----DGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGD-VPKLEVTFYTMKG-GAGKNELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXAMSDKIQMKLEFRQQASGLSRVAEMKHRLEGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVI 2142
+ E DY+S +E + ++ E + D S AVVV LP V E+KH KL VV+K+F ++G + D + PFD + G T GFAFV + AK A T+N + LDK H + V +E + R E+ +P+ + F + +WL D RD FVLR+ E E+ WS+K + Y G+REK GK WC +++WSPQGTYL TFH GIALWGG+++EK GRF HK+V +SP E Y++T + + D AII+W+V T +MLRAFP T A G + F+WSA KY+AR+G D+ISIYELPSM+LL+KKSL+AEGV DF WSP D +LAYWAPE N PARVS+VE+PSR+E+RQKNL VS+C+LHW G +LCVKV RHSKSKKTM+ NFE+FR++E LVPVE +E K + AFAWEP G RFA V G+ +L V+FY M G E+ L TL+D+ +H+YWSP+GN +LA +G+ NG+LEF+D Q ++ EHF+C ++EWDPSGR TAV QP+ S++K MDNGY L++FQG++ E KK++FYQ WRPRP +LL+ AE KKVVKNL+KYEK +++ + EF++ L A + RR E + L +GYDS+DE+ Y+V S T + VL KE I
Sbjct: 16 EAEHYADYLSDEEAEDEVTIKANEEEDFCNDFSMAVVVGGLPVVDESKHGKLLNVVKKIFGQVGAVVD--IHMPFDGS-GKTTGFAFVEYEQEAHAKDAVRTINNFALDKRHTMIVNKYEDIERYEKTTTEFVAPKVEKFVEPKNLQTWLMDPARRDMFVLRHGS---------ETEIFWSDKGEI-EFVYAGDREKTNGKQWCSQYVLWSPQGTYLATFHPQGIALWGGDKYEKVGRFAHKNVTRAVFSPHENYLITVSETEQDSAIIIWDVKTSKMLRAFPAGKPTGAKNEVVQGLMTPFKWSAGDKYVARRGNDVISIYELPSMKLLEKKSLRAEGVHDFFWSPTDLILAYWAPEGNNVPARVSLVELPSRREVRQKNLFNVSDCKLHWHPNGTFLCVKVTRHSKSKKTMFTNFELFRLQEQLVPVEMLEIKDNIVAFAWEPKGTRFATVHGEGQQRLSVSFYDMDGENKSTKEVTLLYTLKDKACSHLYWSPLGNNIVLAGLGEI----NGQLEFWDATEQQSITVQEHFKCTHVEWDPSGRVVATAVCQPLDNSYYKFTMDNGYTLWTFQGKQLLEEKKESFYQFLWRPRPRTLLSDAEYKKVVKNLKKYEKRFDQMDRLKERERQAAKNAERNRKVQEFQELLQRLLAAAAV------RRGEYIALLDGYDSEDENEYIVQSHTYDDVLESKEEI 693
BLAST of mRNA_Ecto-sp13_S_contig581.16268.1 vs. uniprot
Match: A0A5D6XPM0_9STRA (Eukaryotic translation initiation factor 3 subunit B n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XPM0_9STRA) HSP 1 Score: 615 bits (1587), Expect = 3.930e-206 Identity = 326/700 (46.57%), Postives = 441/700 (63.00%), Query Frame = 1
Query: 85 DYMSPDEGDGDLAGFERPELNV---DLSTAVVVSNLPQVVEAKHEKLGGVVRKVFSRMGTIADDGLTHPFDKTTGLTKGFAFVNFLNPQDAKQAAATLNGWQLDKSHLIKVYPFEQLARLRSLPEEYESPEPKPFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWSEKLQTPSLCYGGEREKEAGKAWCELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEYSPCETYVMTCNFEQGDKAIIVWEVLTGQMLRAFPMATTTAADGAA-----SLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGDVP-KLEVTFYTMKGGAG-----KNELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXAMSDKIQMKLEFRQQASGLSRVAEMKHRLEGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVI 2142
DYMS +E + D A ++ + + D S VVV LP V AKH KL V+ K+FS++G + D L+ PF K+ G T GFA V + A +A T+NG+ LDK H + V + + + +S PE + P+ + F + +WL D RD FVLR+ E E+ WS+K + SL Y G REK GK WC +++WSP GTYL TFH PG+ALW GE++EK GRF HK+VK+ +SP ETY++T + + AIIVW+V +G++LR FP T G + F+WSAD +++AR+GKD++S+YELPSM+LL+KKSLKA+GV DF WSP D +LAYWAPE N PARVS+VE+PSR E+RQKNL VS+C+L+W G +L VKV RHSKSKKT++ NFE+FRVREPLVPVE +E K + AFAWEP G RFA V G+ +L V+FY M GGA E+ L TL ++P +H+YWSP+GN +LA +G+ NG LEF+D + + ++ EHF+C ++EWDPSGR T+V QP+ S++K QMDNGY L+SFQG+ E KKD FYQ WRPRP SLL+ E VVKNL+KYEK ++K +++ EF+ R ++ R V L GYDS+DE Y+V++ +VVLS E +
Sbjct: 23 DYMSDEEPE-DAAVTQQHDEDAFLRDFSMCVVVGGLPVVDSAKHAKLLAVLTKIFSQVGAVVD--LSMPFGKS-GSTTGFALVAYDQEAHANEAVRTINGFALDKRHTMLVNKYSDVEKFQSTPETFAEPKVEKFAEPKNYKNWLMDSARRDMFVLRHGT---------ETELFWSDKGEI-SLEYDGAREKVNGKQWCSQYVLWSPHGTYLATFHQPGLALWAGEKYEKVGRFAHKNVKIAVFSPNETYLLTVSETDAENAIIVWDVKSGKILRTFPAGKPTGVKGEVVQGLQTPFKWSADDRFVARRGKDVVSVYELPSMKLLEKKSLKADGVHDFFWSPTDPILAYWAPEGNNVPARVSLVELPSRTEIRQKNLFNVSDCKLNWHPNGTFLGVKVTRHSKSKKTLFTNFEMFRVREPLVPVEMLEMKDSIVAFAWEPKGTRFATVHGESQLRLNVSFYDMNGGAAGSKAASTEITLLYTLTEKPCSHLYWSPLGNNIVLAGLGE----MNGSLEFWDTDERQSITAQEHFKCTHVEWDPSGRVVATSVCQPLDNSYYKFQMDNGYNLWSFQGKLLKEEKKDAFYQFLWRPRPRSLLSDKEYANVVKNLKKYEKRFNEMDRLKERERLAAIQAEKNRLRQEFQDLVEARVRA------VQSARATYVSLLGGYDSEDEDEYIVETHVHDVVLSKAEEV 698 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig581.16268.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig581.16268.1 >prot_Ecto-sp13_S_contig581.16268.1 ID=prot_Ecto-sp13_S_contig581.16268.1|Name=mRNA_Ecto-sp13_S_contig581.16268.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=708bp MGDQYYVDEYDEEPDMEELKDYMSPDEGDGDLAGFERPELNVDLSTAVVVback to top mRNA from alignment at Ecto-sp13_S_contig581:14186..22778- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig581.16268.1 ID=mRNA_Ecto-sp13_S_contig581.16268.1|Name=mRNA_Ecto-sp13_S_contig581.16268.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=8593bp|location=Sequence derived from alignment at Ecto-sp13_S_contig581:14186..22778- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig581:14186..22778- >mRNA_Ecto-sp13_S_contig581.16268.1 ID=mRNA_Ecto-sp13_S_contig581.16268.1|Name=mRNA_Ecto-sp13_S_contig581.16268.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2124bp|location=Sequence derived from alignment at Ecto-sp13_S_contig581:14186..22778- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |