prot_Ecto-sp13_S_contig58.16242.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig58.16242.1
Unique Nameprot_Ecto-sp13_S_contig58.16242.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length91
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig58.16242.1 vs. uniprot
Match: D7G4Q4_ECTSI (Mtg2, mitochondrial Obg/CtgA-like GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Q4_ECTSI)

HSP 1 Score: 109 bits (273), Expect = 3.330e-26
Identity = 50/58 (86.21%), Postives = 52/58 (89.66%), Query Frame = 0 
Query:    1 MFAHFSSRCKALGVLRVCHLGFGSQGCHASVSSVLVLNRQAGGRPGKRRKHRGDYKVL 58
            M AHFSSRC+ LGVLRVCHLGFGS GCHA VSSVLVLNRQAGGRPGKRR HRGDYK +
Sbjct:    1 MLAHFSSRCRVLGVLRVCHLGFGSPGCHAGVSSVLVLNRQAGGRPGKRRNHRGDYKFV 58
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig58.16242.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G4Q4_ECTSI3.330e-2686.21Mtg2, mitochondrial Obg/CtgA-like GTPase n=1 Tax=E... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 11..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 23..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..10
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig58contigEcto-sp13_S_contig58:22769..23295 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig58.16242.1mRNA_Ecto-sp13_S_contig58.16242.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig58 22647..23577 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig58.16242.1 ID=prot_Ecto-sp13_S_contig58.16242.1|Name=mRNA_Ecto-sp13_S_contig58.16242.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=91bp
MFAHFSSRCKALGVLRVCHLGFGSQGCHASVSSVLVLNRQAGGRPGKRRK
HRGDYKVLLWLQQRCWVPGAVVAEDVVRQSRLFAWYWRRD*
back to top