prot_Ecto-sp13_S_contig57389.16147.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig57389.16147.1
Unique Nameprot_Ecto-sp13_S_contig57389.16147.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length149
Homology
BLAST of mRNA_Ecto-sp13_S_contig57389.16147.1 vs. uniprot
Match: A0A6H5KBS7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBS7_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 5.370e-15
Identity = 59/136 (43.38%), Postives = 69/136 (50.74%), Query Frame = 0
Query:   13 QQPAASPAPSTTAGHVDENRPAAPSTAVGVWGIASATAAAVVCDTSRRQXXXXXXQQRWSRGGPVASSRRVDSSGLKRWSHSRCLGTRGSQGACAQAGXXXXXXXXXVCSSGGDDGICGFDKGAPYPFDPRGLLNQ 148
            QQPAAS  PS TA H DE RPAAPS+ VG+ G ASA A A     S R           S    VA++        +  +      T GS+  CA +G          CSSGGDDGI GF++GA YPFDP GL  Q
Sbjct:    5 QQPAASLVPSPTANHADEIRPAAPSSTVGICGTASAPAVATA--VSARAAAAGVPPHGASTA--VAATETAAVGTAEAAASPVAALTPGSRDTCADSGGL-------TCSSGGDDGIYGFERGASYPFDPGGLFAQ 129          
BLAST of mRNA_Ecto-sp13_S_contig57389.16147.1 vs. uniprot
Match: A0A6H5JL81_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL81_9PHAE)

HSP 1 Score: 70.9 bits (172), Expect = 1.270e-11
Identity = 49/109 (44.95%), Postives = 59/109 (54.13%), Query Frame = 0
Query:   41 GVWGIASAT-AAAVVCDTSRRQXXXXXXQQRWSRGGPVASSRRVDSSGLKRWSHSRCLGTRGSQGACAQAGXXXXXXXXXVCSSGGDDGICGFDKGAPYPFDPRGLLNQ 148
            G    A+AT AAAV C+    +              PV SSRRV+SSG+K+WS  +CLG  GSQ  CA AG          CSS GDDGI GF++GA +P  P GL  Q
Sbjct:   74 GATATAAATDAAAVGCEEQSEEVARATEAAVLVLEEPVVSSRRVESSGVKQWSLFQCLGRGGSQ--CAFAGSGGGQ----TCSSCGDDGIYGFERGASFPCGPGGLFAQ 176          
BLAST of mRNA_Ecto-sp13_S_contig57389.16147.1 vs. uniprot
Match: A0A6H5KAU0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAU0_9PHAE)

HSP 1 Score: 65.5 bits (158), Expect = 1.360e-9
Identity = 52/134 (38.81%), Postives = 59/134 (44.03%), Query Frame = 0
Query:   15 PAASPAPSTTAGHVDENRPAAPSTAVGVWGIASATAAAVVCDTSRRQXXXXXXQQRWSRGGPVASSRRVDSSGLKRWSHSRCLGTRGSQGACAQAGXXXXXXXXXVCSSGGDDGICGFDKGAPYPFDPRGLLNQ 148
            PAAS  PS TA H DE RPAAPS+ VG+ G ASA A A                   +    VA             +        GSQ  CA +G           SSGGDD I GF++GA YPFDP GL  Q
Sbjct:  243 PAASLVPSPTANHADEIRPAAPSSTVGICGTASAPAVATAASVRAAVAGVTPHGATTA----VAXXXXXXXXXXXXXASPVAALAPGSQDTCADSGGL-------TYSSGGDDDIYGFERGASYPFDPGGLFAQ 365          
BLAST of mRNA_Ecto-sp13_S_contig57389.16147.1 vs. uniprot
Match: A0A6H5JLH1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLH1_9PHAE)

HSP 1 Score: 57.8 bits (138), Expect = 6.610e-7
Identity = 51/167 (30.54%), Postives = 64/167 (38.32%), Query Frame = 0
Query:   15 PAASPAPSTTAGHVDENRPAAPSTAVGVWGIASATAAAVVCDTSRRQXXXXXXQQRWSRGGPVASSRRVDSSGLKRWSHSRCLGTRG---------------------------------SQGACAQAGXXXXXXXXXVCSSGGDDGICGFDKGAPYPFDPRGLLNQ 148
            PAAS  PSTTA HVD+ RPA+PS+ +G+ G ASA AAA                      G   +    ++  +                                              SQ  CA +G          CSSGGDDGI GF++GA YPFDP G+  Q
Sbjct:  266 PAASLVPSTTANHVDKIRPASPSSTIGICGTASAPAAAXXXXXXXAAAGLTPH-------GATTAVAATETGAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQDTCADSGGL-------TCSSGGDDGIYGFERGASYPFDPGGIFAQ 418          
BLAST of mRNA_Ecto-sp13_S_contig57389.16147.1 vs. uniprot
Match: A0A6H5L9I6_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9I6_9PHAE)

HSP 1 Score: 53.1 bits (126), Expect = 2.600e-5
Identity = 48/139 (34.53%), Postives = 56/139 (40.29%), Query Frame = 0
Query:   24 TAGHVDENRPAAPSTAVGVWGIASATAAAVVCDTSRRQXXXXXXQQRWSR--------------GGPVASSRRVDSSGLKRWSHSRCLGTRGSQGACAQAGXXXXXXXXXVCSSGGDDGICGFDKGAPYPFDPRGLLNQ 148
            TA H DE  PAAPS+ +G+ G ASA A A         XXX                         PVA+                     GSQ   A +G          CSSGGD+GI GF++GA YPFDP GL  Q
Sbjct:  293 TANHADEILPAAPSSTIGICGTASAPAVATAASXXXXXXXXTPHXXXXXXXXXXXXXXXXXXXAASPVAAL------------------APGSQDTRADSGGL-------TCSSGGDNGIYGFERGASYPFDPGGLFAQ 406          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig57389.16147.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KBS7_9PHAE5.370e-1543.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JL81_9PHAE1.270e-1144.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KAU0_9PHAE1.360e-938.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JLH1_9PHAE6.610e-730.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L9I6_9PHAE2.600e-534.53CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig57389contigEcto-sp13_S_contig57389:324..770 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig57389.16147.1mRNA_Ecto-sp13_S_contig57389.16147.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig57389 2..770 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig57389.16147.1 ID=prot_Ecto-sp13_S_contig57389.16147.1|Name=mRNA_Ecto-sp13_S_contig57389.16147.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=149bp
AESQQPQQSLEKQQPAASPAPSTTAGHVDENRPAAPSTAVGVWGIASATA
AAVVCDTSRRQRQERRKQQRWSRGGPVASSRRVDSSGLKRWSHSRCLGTR
GSQGACAQAGGGGGGGGGRVCSSGGDDGICGFDKGAPYPFDPRGLLNQ*
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