prot_Ecto-sp13_S_contig56654.16026.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig56654.16026.1
Unique Nameprot_Ecto-sp13_S_contig56654.16026.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length121
Homology
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BLAST of mRNA_Ecto-sp13_S_contig56654.16026.1 vs. uniprot
Match: A0A6H5KB14_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB14_9PHAE)

HSP 1 Score: 58.9 bits (141), Expect = 1.100e-8
Identity = 26/41 (63.41%), Postives = 33/41 (80.49%), Query Frame = 0 
Query:    4 LVQGYEGLLQRPICVDRIAEALLNGVDSADGRGRGVPLKIR 44
            ++ GYEGLL+RP+CVD  A+ALLNG DSADG G+G+P   R
Sbjct:   82 ILPGYEGLLRRPMCVDVTAQALLNGADSADGGGKGIPFLDR 122
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BLAST of mRNA_Ecto-sp13_S_contig56654.16026.1 vs. uniprot
Match: A0A6H5JIG7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIG7_9PHAE)

HSP 1 Score: 59.7 bits (143), Expect = 5.900e-8
Identity = 28/44 (63.64%), Postives = 35/44 (79.55%), Query Frame = 0 
Query:    4 LVQGYEGLLQRPICVDRIAEALLNGVDSADGRGRGVPLKIRCRG 47
            ++ GYEGLL+RP+ VDR AE LLNG + ADG GRGVP+K+R  G
Sbjct:   60 ILPGYEGLLRRPMRVDRTAEDLLNGGEGADGGGRGVPVKVRGNG 103
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BLAST of mRNA_Ecto-sp13_S_contig56654.16026.1 vs. uniprot
Match: D8LFN7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFN7_ECTSI)

HSP 1 Score: 55.1 bits (131), Expect = 1.950e-7
Identity = 26/37 (70.27%), Postives = 30/37 (81.08%), Query Frame = 0 
Query:    4 LVQGYEGLLQRPICVDRIAEALLNGVDSADGRGRGVP 40
            ++ GYEGL++RPI V R AEA LNGVDSADG GRG P
Sbjct:   64 ILSGYEGLVRRPIRVGRTAEAFLNGVDSADGGGRGYP 100
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig56654.16026.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KB14_9PHAE1.100e-863.41Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JIG7_9PHAE5.900e-863.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LFN7_ECTSI1.950e-770.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig56654contigEcto-sp13_S_contig56654:402..764 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig56654.16026.1mRNA_Ecto-sp13_S_contig56654.16026.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig56654 402..823 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig56654.16026.1 ID=prot_Ecto-sp13_S_contig56654.16026.1|Name=mRNA_Ecto-sp13_S_contig56654.16026.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=121bp
SGRLVQGYEGLLQRPICVDRIAEALLNGVDSADGRGRGVPLKIRCRGGGF
SCRVQHPLTKRWGCLCRCVYSHPCGHCTRRGIHQRSGVLAGDCLTDFTPT
FFGLTSFFMFQSYFYLAENT*
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