prot_Ecto-sp13_S_contig5636.15976.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5636.15976.1
Unique Nameprot_Ecto-sp13_S_contig5636.15976.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length183
Homology
BLAST of mRNA_Ecto-sp13_S_contig5636.15976.1 vs. uniprot
Match: D7FJ40_ECTSI (Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJ40_ECTSI)

HSP 1 Score: 366 bits (940), Expect = 4.010e-126
Identity = 179/183 (97.81%), Postives = 183/183 (100.00%), Query Frame = 0
Query:    1 MSTSAKVWIDQNTRVIVQGFTGKQGTFHAEQAIEYGSQYVGGVTPKKGGQTHLGKPVFNTVSEAKEGVKPDASVVYVPPPFAGAAVLDAIENEIPLVVCITEGIPQKDMAKVKHALKQQTATRLIGPNCPGIIKPGECKIGIMPGYIHKKGKIGIVSRSGTLTYEAVWQTTVTGMGQSTCVGI 183
            MS+SAKVWIDQNT+VIVQGFTGKQGTFHAEQAIEYGSQYVGGVTPKKGGQTHLGKPVFNTV+EAKEGVKPDASVVYVPPPFAGAAVLDAIENEIPLVVCITEGIPQKDMAKVKHAL+QQTATRLIGPNCPGIIKPGECKIGIMPGYIHKKGKIGIVSRSGTLTYEAVWQTTVTGMGQSTCVGI
Sbjct:   21 MSSSAKVWIDQNTKVIVQGFTGKQGTFHAEQAIEYGSQYVGGVTPKKGGQTHLGKPVFNTVAEAKEGVKPDASVVYVPPPFAGAAVLDAIENEIPLVVCITEGIPQKDMAKVKHALRQQTATRLIGPNCPGIIKPGECKIGIMPGYIHKKGKIGIVSRSGTLTYEAVWQTTVTGMGQSTCVGI 203          
BLAST of mRNA_Ecto-sp13_S_contig5636.15976.1 vs. uniprot
Match: A0A7S1DBS3_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DBS3_CYCTE)

HSP 1 Score: 310 bits (794), Expect = 2.300e-105
Identity = 150/183 (81.97%), Postives = 165/183 (90.16%), Query Frame = 0
Query:    1 MSTSAKVWIDQNTRVIVQGFTGKQGTFHAEQAIEYGSQYVGGVTPKKGGQTHLGKPVFNTVSEAKEGVKPDASVVYVPPPFAGAAVLDAIENEIPLVVCITEGIPQKDMAKVKHALKQQTATRLIGPNCPGIIKPGECKIGIMPGYIHKKGKIGIVSRSGTLTYEAVWQTTVTGMGQSTCVGI 183
            MS +AKVWID++TRVI QGFTGKQGTFH+EQAIEYG+  VGGVTPKKGGQTHLG PVFNTV EA + VKPDASVVYVPPPF   A+LDA+E EIPLV+ ITEGIPQ+DMAKVK+AL+ Q+ TRLIGPNCPGIIKPGECKIGIMPGYIHK GKIGIVSRSGTLTYEAV+QTT  G+GQSTCVGI
Sbjct:   20 MSANAKVWIDKDTRVICQGFTGKQGTFHSEQAIEYGTNMVGGVTPKKGGQTHLGLPVFNTVQEAVDEVKPDASVVYVPPPFCANAILDAVEAEIPLVIAITEGIPQQDMAKVKYALRSQSVTRLIGPNCPGIIKPGECKIGIMPGYIHKPGKIGIVSRSGTLTYEAVYQTTTAGLGQSTCVGI 202          
BLAST of mRNA_Ecto-sp13_S_contig5636.15976.1 vs. uniprot
Match: A0A7R9ZLR7_9STRA (Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZLR7_9STRA)

HSP 1 Score: 313 bits (803), Expect = 3.200e-105
Identity = 151/183 (82.51%), Postives = 167/183 (91.26%), Query Frame = 0
Query:    1 MSTSAKVWIDQNTRVIVQGFTGKQGTFHAEQAIEYGSQYVGGVTPKKGGQTHLGKPVFNTVSEAKEGVKPDASVVYVPPPFAGAAVLDAIENEIPLVVCITEGIPQKDMAKVKHALKQQTATRLIGPNCPGIIKPGECKIGIMPGYIHKKGKIGIVSRSGTLTYEAVWQTTVTGMGQSTCVGI 183
            MS++AKVWID++TRVI QGFTGKQGTFH+EQAIEYG+  VGGVTPKKGGQTHLG PVFNTV EAK  VKPDASV+YVPPPF   A++DAIE EIPLVV ITEG+PQ++MA+VKHAL  QTATRLIGPNCPGIIKPGECKIGIMPGYIH+KGKIG+VSRSGTLTYEAV QTTV G+GQSTCVGI
Sbjct:   23 MSSTAKVWIDKDTRVICQGFTGKQGTFHSEQAIEYGTNMVGGVTPKKGGQTHLGLPVFNTVEEAKTEVKPDASVIYVPPPFCAQAIMDAIEAEIPLVVAITEGVPQQEMARVKHALNTQTATRLIGPNCPGIIKPGECKIGIMPGYIHQKGKIGVVSRSGTLTYEAVHQTTVAGLGQSTCVGI 205          
BLAST of mRNA_Ecto-sp13_S_contig5636.15976.1 vs. uniprot
Match: B7G0K7_PHATC (Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G0K7_PHATC)

HSP 1 Score: 312 bits (799), Expect = 7.150e-105
Identity = 148/183 (80.87%), Postives = 167/183 (91.26%), Query Frame = 0
Query:    1 MSTSAKVWIDQNTRVIVQGFTGKQGTFHAEQAIEYGSQYVGGVTPKKGGQTHLGKPVFNTVSEAKEGVKPDASVVYVPPPFAGAAVLDAIENEIPLVVCITEGIPQKDMAKVKHALKQQTATRLIGPNCPGIIKPGECKIGIMPGYIHKKGKIGIVSRSGTLTYEAVWQTTVTGMGQSTCVGI 183
            MS++AKVW+D+N+RVI QGFTGKQGTFH+ QAI+YG+  VGGVTPKKGGQ HLG PVFNTV EA +GV+PDASV+YVPPP+A  A+LDAIE EI LVVCITEGIPQ+DMA+VKHAL+ Q  TRLIGPNCPGIIKPGECKIGIMPGYIH+ GKIG+VSRSGTLTYEAVWQTTVTG+GQSTCVGI
Sbjct:    1 MSSTAKVWVDKNSRVICQGFTGKQGTFHSTQAIDYGTNMVGGVTPKKGGQEHLGLPVFNTVQEAVDGVQPDASVIYVPPPYAAQAILDAIEAEIGLVVCITEGIPQQDMARVKHALRLQDRTRLIGPNCPGIIKPGECKIGIMPGYIHRPGKIGVVSRSGTLTYEAVWQTTVTGLGQSTCVGI 183          
BLAST of mRNA_Ecto-sp13_S_contig5636.15976.1 vs. uniprot
Match: A0A7S0AIP9_9STRA (Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial n=2 Tax=Mediophyceae TaxID=589449 RepID=A0A7S0AIP9_9STRA)

HSP 1 Score: 312 bits (799), Expect = 1.860e-104
Identity = 149/183 (81.42%), Postives = 167/183 (91.26%), Query Frame = 0
Query:    1 MSTSAKVWIDQNTRVIVQGFTGKQGTFHAEQAIEYGSQYVGGVTPKKGGQTHLGKPVFNTVSEAKEGVKPDASVVYVPPPFAGAAVLDAIENEIPLVVCITEGIPQKDMAKVKHALKQQTATRLIGPNCPGIIKPGECKIGIMPGYIHKKGKIGIVSRSGTLTYEAVWQTTVTGMGQSTCVGI 183
            MS++A VW+D+NT+VI QGFTGKQGTFH+ QAIEYG+  VGGVTPKKGGQTHLG PVFNTV+EA +GV+PDASV+YVPPPF  AA++DAIENEIPLVV ITEG+PQ+DMAKVK AL  Q+ATRLIGPNCPGIIKPGECKIGIMPGYIH  GKIG+VSRSGTLTYEAV QTTVTG+GQSTCVGI
Sbjct:   38 MSSTANVWVDKNTKVICQGFTGKQGTFHSTQAIEYGTNMVGGVTPKKGGQTHLGLPVFNTVAEAVDGVQPDASVIYVPPPFCAAAIMDAIENEIPLVVAITEGVPQQDMAKVKKALSMQSATRLIGPNCPGIIKPGECKIGIMPGYIHTPGKIGVVSRSGTLTYEAVHQTTVTGLGQSTCVGI 220          
BLAST of mRNA_Ecto-sp13_S_contig5636.15976.1 vs. uniprot
Match: A0A7S2LEI1_9STRA (Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LEI1_9STRA)

HSP 1 Score: 305 bits (780), Expect = 9.330e-102
Identity = 147/183 (80.33%), Postives = 162/183 (88.52%), Query Frame = 0
Query:    1 MSTSAKVWIDQNTRVIVQGFTGKQGTFHAEQAIEYGSQYVGGVTPKKGGQTHLGKPVFNTVSEAKEGVKPDASVVYVPPPFAGAAVLDAIENEIPLVVCITEGIPQKDMAKVKHALKQQTATRLIGPNCPGIIKPGECKIGIMPGYIHKKGKIGIVSRSGTLTYEAVWQTTVTGMGQSTCVGI 183
            MS +AKVWID++TRVI QGFTGKQGTFH+EQAI YG+Q VGGVTPKKGGQ HLG PVFNTV+EA EGV+PDASV+YVPPPF   A++DAIE EIPLVV ITEG+PQ+DMA+VKH LK Q  TRLIGPNCPGIIKPGECKIGIMPGYIH  GKIG+VSRSGTLTYEAV QTT  G+GQSTCVGI
Sbjct:   24 MSANAKVWIDKDTRVICQGFTGKQGTFHSEQAIAYGTQMVGGVTPKKGGQEHLGLPVFNTVAEAVEGVQPDASVIYVPPPFCAKAIMDAIEAEIPLVVAITEGVPQQDMARVKHMLKAQDKTRLIGPNCPGIIKPGECKIGIMPGYIHTPGKIGVVSRSGTLTYEAVHQTTTAGLGQSTCVGI 206          
BLAST of mRNA_Ecto-sp13_S_contig5636.15976.1 vs. uniprot
Match: A0A7S4UK23_9STRA (Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4UK23_9STRA)

HSP 1 Score: 304 bits (778), Expect = 1.540e-101
Identity = 146/183 (79.78%), Postives = 163/183 (89.07%), Query Frame = 0
Query:    1 MSTSAKVWIDQNTRVIVQGFTGKQGTFHAEQAIEYGSQYVGGVTPKKGGQTHLGKPVFNTVSEAKEGVKPDASVVYVPPPFAGAAVLDAIENEIPLVVCITEGIPQKDMAKVKHALKQQTATRLIGPNCPGIIKPGECKIGIMPGYIHKKGKIGIVSRSGTLTYEAVWQTTVTGMGQSTCVGI 183
            MS +AKVW+D++T+VI QGFTGKQGTFH+ QAIEYG+  VGGVTPKKGGQTHLG PVFNTV+EA EGV+PDASV+YVPPPF   A++DAIENEI LVV ITEG+PQ+DMA+VK ALK Q  TRLIGPNCPGIIKPGECKIGIMPGYIH  GKIG+VSRSGTLTYEAV QTTV G+GQSTCVGI
Sbjct:   27 MSANAKVWVDKDTKVICQGFTGKQGTFHSTQAIEYGTNMVGGVTPKKGGQTHLGLPVFNTVAEAVEGVQPDASVIYVPPPFCAGAIMDAIENEISLVVAITEGVPQQDMARVKAALKTQNKTRLIGPNCPGIIKPGECKIGIMPGYIHMPGKIGVVSRSGTLTYEAVHQTTVAGLGQSTCVGI 209          
BLAST of mRNA_Ecto-sp13_S_contig5636.15976.1 vs. uniprot
Match: A0A1E7FEJ7_9STRA (Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial n=3 Tax=Bacillariaceae TaxID=33852 RepID=A0A1E7FEJ7_9STRA)

HSP 1 Score: 304 bits (778), Expect = 1.650e-101
Identity = 145/183 (79.23%), Postives = 166/183 (90.71%), Query Frame = 0
Query:    1 MSTSAKVWIDQNTRVIVQGFTGKQGTFHAEQAIEYGSQYVGGVTPKKGGQTHLGKPVFNTVSEAKEGVKPDASVVYVPPPFAGAAVLDAIENEIPLVVCITEGIPQKDMAKVKHALKQQTATRLIGPNCPGIIKPGECKIGIMPGYIHKKGKIGIVSRSGTLTYEAVWQTTVTGMGQSTCVGI 183
            MS++AKVW+D+NTRVI QGFTGKQGTFH+ QAIEYG+  VGGVTP KGGQ HLG PVFNTV+EA + +KPDASV+YVPPPF  AA++DAIE EIPLVV ITEG+PQ+DMA+VK+AL+QQ+ATRLIGPNCPGIIKPGECKIGIMPGYIH KGKIG+VSRSGTLTYEAV QTT+ G+GQST VGI
Sbjct:   24 MSSTAKVWVDKNTRVICQGFTGKQGTFHSTQAIEYGTNMVGGVTPNKGGQEHLGLPVFNTVAEAVDELKPDASVIYVPPPFCAAAIMDAIEAEIPLVVAITEGVPQQDMARVKYALRQQSATRLIGPNCPGIIKPGECKIGIMPGYIHTKGKIGVVSRSGTLTYEAVHQTTIAGLGQSTVVGI 206          
BLAST of mRNA_Ecto-sp13_S_contig5636.15976.1 vs. uniprot
Match: A0A6U3SMJ6_9STRA (Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3SMJ6_9STRA)

HSP 1 Score: 304 bits (778), Expect = 1.880e-101
Identity = 146/183 (79.78%), Postives = 163/183 (89.07%), Query Frame = 0
Query:    1 MSTSAKVWIDQNTRVIVQGFTGKQGTFHAEQAIEYGSQYVGGVTPKKGGQTHLGKPVFNTVSEAKEGVKPDASVVYVPPPFAGAAVLDAIENEIPLVVCITEGIPQKDMAKVKHALKQQTATRLIGPNCPGIIKPGECKIGIMPGYIHKKGKIGIVSRSGTLTYEAVWQTTVTGMGQSTCVGI 183
            MS +AKVW+D++T+VI QGFTGKQGTFH+ QAIEYG+  VGGVTPKKGGQTHLG PVFNTV+EA EGV+PDASV+YVPPPF   A++DAIENEI LVV ITEG+PQ+DMA+VK ALK Q  TRLIGPNCPGIIKPGECKIGIMPGYIH  GKIG+VSRSGTLTYEAV QTTV G+GQSTCVGI
Sbjct:   27 MSANAKVWVDKDTKVICQGFTGKQGTFHSTQAIEYGTNMVGGVTPKKGGQTHLGLPVFNTVAEAVEGVQPDASVIYVPPPFCAGAIMDAIENEISLVVAITEGVPQQDMARVKAALKTQNKTRLIGPNCPGIIKPGECKIGIMPGYIHMPGKIGVVSRSGTLTYEAVHQTTVAGLGQSTCVGI 209          
BLAST of mRNA_Ecto-sp13_S_contig5636.15976.1 vs. uniprot
Match: A0A7S0GYI0_9EUKA (Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0GYI0_9EUKA)

HSP 1 Score: 299 bits (765), Expect = 8.040e-100
Identity = 145/183 (79.23%), Postives = 164/183 (89.62%), Query Frame = 0
Query:    1 MSTSAKVWIDQNTRVIVQGFTGKQGTFHAEQAIEYGSQYVGGVTPKKGGQTHLGKPVFNTVSEAKEGVKPDASVVYVPPPFAGAAVLDAIENEIPLVVCITEGIPQKDMAKVKHALKQQTATRLIGPNCPGIIKPGECKIGIMPGYIHKKGKIGIVSRSGTLTYEAVWQTTVTGMGQSTCVGI 183
            MST+AKV++D+NT+VI QGFTGKQGTFH+EQAI YG++ VGGVTPKKGG THLG PVF  V+EAK+    +ASV+YVPPPFA +A++DAIENEI LVVCITEGIPQKDM +VKHAL+ Q+ATRLIGPNCPGIIKPGECKIGIMPGYIH  GKIGIVSRSGTLTYEAV QTT TG+GQSTCVGI
Sbjct:    1 MSTTAKVFVDKNTKVICQGFTGKQGTFHSEQAIAYGTKMVGGVTPKKGGTTHLGLPVFENVAEAKKETGCNASVIYVPPPFAASAIMDAIENEIDLVVCITEGIPQKDMVRVKHALRSQSATRLIGPNCPGIIKPGECKIGIMPGYIHLPGKIGIVSRSGTLTYEAVHQTTATGLGQSTCVGI 183          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5636.15976.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJ40_ECTSI4.010e-12697.81Succinate--CoA ligase [ADP-forming] subunit alpha,... [more]
A0A7S1DBS3_CYCTE2.300e-10581.97Hypothetical protein (Fragment) n=1 Tax=Cyclophora... [more]
A0A7R9ZLR7_9STRA3.200e-10582.51Succinate--CoA ligase [ADP-forming] subunit alpha,... [more]
B7G0K7_PHATC7.150e-10580.87Succinate--CoA ligase [ADP-forming] subunit alpha,... [more]
A0A7S0AIP9_9STRA1.860e-10481.42Succinate--CoA ligase [ADP-forming] subunit alpha,... [more]
A0A7S2LEI1_9STRA9.330e-10280.33Succinate--CoA ligase [ADP-forming] subunit alpha,... [more]
A0A7S4UK23_9STRA1.540e-10179.78Succinate--CoA ligase [ADP-forming] subunit alpha,... [more]
A0A1E7FEJ7_9STRA1.650e-10179.23Succinate--CoA ligase [ADP-forming] subunit alpha,... [more]
A0A6U3SMJ6_9STRA1.880e-10179.78Succinate--CoA ligase [ADP-forming] subunit alpha,... [more]
A0A7S0GYI0_9EUKA8.040e-10079.23Succinate--CoA ligase [ADP-forming] subunit alpha,... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01798SCOASYNTHASEcoord: 86..103
score: 54.41
coord: 174..183
score: 16.18
NoneNo IPR availableGENE3D3.40.50.720coord: 6..128
e-value: 3.5E-51
score: 174.5
NoneNo IPR availablePANTHERPTHR11117SUCCINYL-COA LIGASE SUBUNIT ALPHAcoord: 4..183
NoneNo IPR availablePANTHERPTHR11117:SF19SUCCINATE--COA LIGASE [ADP-FORMING] SUBUNIT ALPHA-1, MITOCHONDRIALcoord: 4..183
IPR003781CoA-bindingSMARTSM00881CoA_binding_2coord: 8..104
e-value: 8.3E-34
score: 128.3
IPR003781CoA-bindingPFAMPF02629CoA_bindingcoord: 10..103
e-value: 6.2E-29
score: 100.5
IPR016102Succinyl-CoA synthetase-likeGENE3D3.40.50.261coord: 129..183
e-value: 2.0E-22
score: 81.5
IPR016102Succinyl-CoA synthetase-likeSUPERFAMILY52210Succinyl-CoA synthetase domainscoord: 128..183
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 5..127

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5636contigEcto-sp13_S_contig5636:3..4779 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5636.15976.1mRNA_Ecto-sp13_S_contig5636.15976.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5636 3..4779 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5636.15976.1 ID=prot_Ecto-sp13_S_contig5636.15976.1|Name=mRNA_Ecto-sp13_S_contig5636.15976.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=183bp
MSTSAKVWIDQNTRVIVQGFTGKQGTFHAEQAIEYGSQYVGGVTPKKGGQ
THLGKPVFNTVSEAKEGVKPDASVVYVPPPFAGAAVLDAIENEIPLVVCI
TEGIPQKDMAKVKHALKQQTATRLIGPNCPGIIKPGECKIGIMPGYIHKK
GKIGIVSRSGTLTYEAVWQTTVTGMGQSTCVGI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003781CoA-bd
IPR016102Succinyl-CoA_synth-like
IPR036291NAD(P)-bd_dom_sf