prot_Ecto-sp13_S_contig5628.15967.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5628.15967.1
Unique Nameprot_Ecto-sp13_S_contig5628.15967.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length123
Homology
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BLAST of mRNA_Ecto-sp13_S_contig5628.15967.1 vs. uniprot
Match: A0A6H5JPP5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPP5_9PHAE)

HSP 1 Score: 151 bits (382), Expect = 4.250e-40
Identity = 87/105 (82.86%), Postives = 95/105 (90.48%), Query Frame = 0 
Query:   16 ILASGVTDSAVTAGPPVDRSQGRGGGPEEASPADSNALARAKFANEKETDTVREAQTTRSPLCQSDTSDKPSGGHTTIETKGNSRSNARRSQRGQDSSRGIRSAN 120
            +LASGVTD+AVTAGPP+DRSQGRGGGPEEASPADSN+LA A+ ANEKET  VREAQTT+SPLCQ DTSDKPS G TTIETKG+S SNARRS+RGQDSSRG RS N
Sbjct: 1387 MLASGVTDNAVTAGPPLDRSQGRGGGPEEASPADSNSLAEAEVANEKETGIVREAQTTKSPLCQVDTSDKPSRGQTTIETKGDSCSNARRSKRGQDSSRGNRSTN 1491
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BLAST of mRNA_Ecto-sp13_S_contig5628.15967.1 vs. uniprot
Match: D7G2X1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X1_ECTSI)

HSP 1 Score: 144 bits (362), Expect = 2.160e-37
Identity = 84/103 (81.55%), Postives = 90/103 (87.38%), Query Frame = 0 
Query:   16 ILASGVTDSAVTAGPPVDRSQGRGGGPEEASPADSNALARAKFANEKETDTVREAQTTRSPLCQSDTSDKPSGGHTTIETKGNSRSNARRSQRGQDSSRGIRS 118
            +LASG TDSAVTAG PVDRSQGRG GPEEASPADSNALA+A+ AN++ET  VREAQTT+SPLCQ DTS  PSG  TTIETKGNSRSN RRSQRGQDSSRG RS
Sbjct: 4253 MLASGATDSAVTAGSPVDRSQGRGRGPEEASPADSNALAQAEVANKRETGIVREAQTTKSPLCQVDTSGMPSGAQTTIETKGNSRSNVRRSQRGQDSSRGNRS 4355
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5628.15967.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JPP5_9PHAE4.250e-4082.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2X1_ECTSI2.160e-3781.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5628contigEcto-sp13_S_contig5628:7210..7718 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5628.15967.1mRNA_Ecto-sp13_S_contig5628.15967.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5628 6872..7718 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5628.15967.1 ID=prot_Ecto-sp13_S_contig5628.15967.1|Name=mRNA_Ecto-sp13_S_contig5628.15967.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=123bp
MSKEGVVVVGLRATRILASGVTDSAVTAGPPVDRSQGRGGGPEEASPADS
NALARAKFANEKETDTVREAQTTRSPLCQSDTSDKPSGGHTTIETKGNSR
SNARRSQRGQDSSRGIRSANAGR
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