prot_Ecto-sp13_S_contig5620.15961.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5620.15961.1
Unique Nameprot_Ecto-sp13_S_contig5620.15961.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length181
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig5620.15961.1 vs. uniprot
Match: D7FI79_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI79_ECTSI)

HSP 1 Score: 303 bits (775), Expect = 5.710e-92
Identity = 165/170 (97.06%), Postives = 165/170 (97.06%), Query Frame = 0 
Query:    1 AAGLAAARARAMAELRSVAGLEHAAALSKLAARIPGMSVSAVYLAVAQRVLCGETGGLPPEDMDLLRGALITDSGEEEEAEALSASVYHLLSPLLPKMAADDLVELAAAVCAPHAAGDHRGYYPCRRTTAAATSSPAPADNRMAPLRLTVRCRRRLLAAVEVAEGSGSAE 170
            AAGLAAARARAMAELRSVAGLEHAAALSKLAARIPGMSVSAVYLAVAQRVLCGE GGL PEDMDLLRGALITDSGEEEEAEALSASVYHLLSPLLPKMAADDLVELAAAVCAPHAAGDHRGYYPCRRTT AATSSP PADNRMAPLRLTVRCRRRLLAA EVAEGSGSAE
Sbjct: 2487 AAGLAAARARAMAELRSVAGLEHAAALSKLAARIPGMSVSAVYLAVAQRVLCGEAGGLSPEDMDLLRGALITDSGEEEEAEALSASVYHLLSPLLPKMAADDLVELAAAVCAPHAAGDHRGYYPCRRTTPAATSSPPPADNRMAPLRLTVRCRRRLLAAAEVAEGSGSAE 2656
[Close]
BLAST of mRNA_Ecto-sp13_S_contig5620.15961.1 vs. uniprot
Match: A0A6H5JKW6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKW6_9PHAE)

HSP 1 Score: 290 bits (743), Expect = 1.130e-87
Identity = 161/172 (93.60%), Postives = 163/172 (94.77%), Query Frame = 0 
Query:    1 AAGLAAARARAMAELRSVAGLEHAAALSKLAARIPGMSVSAVYLAVAQRVLCGETGGLPPEDMDLLRGALITDSGEEEEAEALSASVYHLLSPLLPKMAADDLVELAAAVCAPHAAGDHRGYYPCRRTTAAATSSPAPADNRMAPLRLTVRCRRRLLAAVE--VAEGSGSAE 170
            AAGLAAARARAMAE+RSVAGLEH A LSKLAARIPGMSVSAVYLAVAQRVLCGETGGL PEDMDLLRGALIT SGEEEEAEALSASVYHLLSPLLPKMAA DLV+LAAAVCAPHAAGDHRGYYPCRRTTAAATSSPAPADNRMAPLRLTVRCRRRLLAA    VAEGSGSAE
Sbjct: 1286 AAGLAAARARAMAEVRSVAGLEHVAVLSKLAARIPGMSVSAVYLAVAQRVLCGETGGLSPEDMDLLRGALITGSGEEEEAEALSASVYHLLSPLLPKMAAHDLVDLAAAVCAPHAAGDHRGYYPCRRTTAAATSSPAPADNRMAPLRLTVRCRRRLLAAAAAVVAEGSGSAE 1457
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5620.15961.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FI79_ECTSI5.710e-9297.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JKW6_9PHAE1.130e-8793.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5620contigEcto-sp13_S_contig5620:6772..7314 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5620.15961.1mRNA_Ecto-sp13_S_contig5620.15961.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5620 6772..7315 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5620.15961.1 ID=prot_Ecto-sp13_S_contig5620.15961.1|Name=mRNA_Ecto-sp13_S_contig5620.15961.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=181bp
AAGLAAARARAMAELRSVAGLEHAAALSKLAARIPGMSVSAVYLAVAQRV
LCGETGGLPPEDMDLLRGALITDSGEEEEAEALSASVYHLLSPLLPKMAA
DDLVELAAAVCAPHAAGDHRGYYPCRRTTAAATSSPAPADNRMAPLRLTV
RCRRRLLAAVEVAEGSGSAEDASAAAATLAG
back to top