prot_Ecto-sp13_S_contig56190.15957.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig56190.15957.1
Unique Nameprot_Ecto-sp13_S_contig56190.15957.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length118
Homology
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BLAST of mRNA_Ecto-sp13_S_contig56190.15957.1 vs. uniprot
Match: D7G090_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G090_ECTSI)

HSP 1 Score: 140 bits (354), Expect = 7.260e-40
Identity = 92/118 (77.97%), Postives = 96/118 (81.36%), Query Frame = 0 
Query:    1 MSKYDNTLLTPATCVASDDGMTMSPAGGRCRGRLSGRFGMRSSHKDLLLTSKTPXXXXXXXXXSDPAADIEKKRAKTSNIIKRAVHKINKXXXXXXPPSQSRSSSSRGAAVSGEPPKV 118
            MSKYD+TLLTPATCVASDD MTMS AGGR RGR SGRFG RSSHKDLLLTSKTPXXXXXXX  SDPAADI+K+RAKTSNIIKRAVHKINKXXXXXX              VS EPPK+
Sbjct:    1 MSKYDSTLLTPATCVASDDDMTMSQAGGRHRGRWSGRFGKRSSHKDLLLTSKTPXXXXXXXITSDPAADIDKRRAKTSNIIKRAVHKINKXXXXXXXXXXXXXXXXXXXXVSEEPPKI 118
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig56190.15957.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G090_ECTSI7.260e-4077.97Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig56190contigEcto-sp13_S_contig56190:101..454 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig56190.15957.1mRNA_Ecto-sp13_S_contig56190.15957.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig56190 101..454 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig56190.15957.1 ID=prot_Ecto-sp13_S_contig56190.15957.1|Name=mRNA_Ecto-sp13_S_contig56190.15957.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=118bp
MSKYDNTLLTPATCVASDDGMTMSPAGGRCRGRLSGRFGMRSSHKDLLLT
SKTPPPATTSSITSDPAADIEKKRAKTSNIIKRAVHKINKKRRRSLPPSQ
SRSSSSRGAAVSGEPPKV
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