prot_Ecto-sp13_S_contig56130.15949.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig56130.15949.1
Unique Nameprot_Ecto-sp13_S_contig56130.15949.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length98
Homology
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BLAST of mRNA_Ecto-sp13_S_contig56130.15949.1 vs. uniprot
Match: D7FXP6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXP6_ECTSI)

HSP 1 Score: 162 bits (410), Expect = 2.540e-44
Identity = 85/97 (87.63%), Postives = 89/97 (91.75%), Query Frame = 0 
Query:    1 GSSENLSVVPSDATSPLVGDTYGAERDGLRSRGGDSSRHSRSEAAVLEAIVGLERRMNERMDRMEGMLAGVCDRVEELSASLPHAARDVVGKRGAHG 97
            GSSENLSVVPSDA SPLVGDT GAE +GLRSRGGDSSRH RSEAAVLEAIVG+ERRMNERM R+EGMLAGVCDR+EELSA LPHAARDVV  RGAHG
Sbjct: 1030 GSSENLSVVPSDARSPLVGDTCGAEPNGLRSRGGDSSRHPRSEAAVLEAIVGVERRMNERMARIEGMLAGVCDRLEELSARLPHAARDVVETRGAHG 1126
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BLAST of mRNA_Ecto-sp13_S_contig56130.15949.1 vs. uniprot
Match: A0A6H5KXC0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXC0_9PHAE)

HSP 1 Score: 149 bits (377), Expect = 7.180e-40
Identity = 77/86 (89.53%), Postives = 81/86 (94.19%), Query Frame = 0 
Query:    1 GSSENLSVVPSDATSPLVGDTYGAERDGLRSRGGDSSRHSRSEAAVLEAIVGLERRMNERMDRMEGMLAGVCDRVEELSASLPHAA 86
            GSSEN+SVVPSDA SPLVGDTYGAER+GLRSRG DSSRH RSEA VLEAIVG+ERRMNERMDRMEGMLAGVCDR+EELSA LPHAA
Sbjct: 1083 GSSENISVVPSDARSPLVGDTYGAERNGLRSRGVDSSRHPRSEAPVLEAIVGVERRMNERMDRMEGMLAGVCDRLEELSACLPHAA 1168
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig56130.15949.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FXP6_ECTSI2.540e-4487.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KXC0_9PHAE7.180e-4089.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig56130contigEcto-sp13_S_contig56130:130..423 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig56130.15949.1mRNA_Ecto-sp13_S_contig56130.15949.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig56130 130..676 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig56130.15949.1 ID=prot_Ecto-sp13_S_contig56130.15949.1|Name=mRNA_Ecto-sp13_S_contig56130.15949.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=98bp
GSSENLSVVPSDATSPLVGDTYGAERDGLRSRGGDSSRHSRSEAAVLEAI
VGLERRMNERMDRMEGMLAGVCDRVEELSASLPHAARDVVGKRGAHG*
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