prot_Ecto-sp13_S_contig5613.15948.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5613.15948.1
Unique Nameprot_Ecto-sp13_S_contig5613.15948.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length202
Homology
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BLAST of mRNA_Ecto-sp13_S_contig5613.15948.1 vs. uniprot
Match: D7FZX5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZX5_ECTSI)

HSP 1 Score: 232 bits (592), Expect = 3.110e-73
Identity = 119/126 (94.44%), Postives = 124/126 (98.41%), Query Frame = 0 
Query:   76 KTAEVCTDENVRELCGYEEVDENLLPENIPDLNVCVCQVASGAWDLCVDFTSSCENIISDRRFLFMSLISLWVGLGLAFIVAVVSMRVVATTYDAAAIAKAEEKKLMKAKFARDSATAAPPFGGPV 201
            KTAEVCTDENVRELCGYE+VDENLLPE+IPDLNVCVC+VASGAWDLCVDFTS+CENI SDRRFL MSLISLWVGLGLAFIVAVVSMRVVATTYDAAAIAKAEEKKLMKAKFA+DSATAAPPFGGPV
Sbjct:  178 KTAEVCTDENVRELCGYEDVDENLLPEDIPDLNVCVCRVASGAWDLCVDFTSNCENITSDRRFLLMSLISLWVGLGLAFIVAVVSMRVVATTYDAAAIAKAEEKKLMKAKFAKDSATAAPPFGGPV 303
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5613.15948.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FZX5_ECTSI3.110e-7394.44Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 138..159
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..25
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 160..201
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 52..137
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 26..51
NoneNo IPR availableTMHMMTMhelixcoord: 143..165

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5613contigEcto-sp13_S_contig5613:2722..7075 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5613.15948.1mRNA_Ecto-sp13_S_contig5613.15948.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5613 2722..8321 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5613.15948.1 ID=prot_Ecto-sp13_S_contig5613.15948.1|Name=mRNA_Ecto-sp13_S_contig5613.15948.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=202bp
CLSACLSVSVSSSLCPPLCLSVSFSLSVYVLSLCLSVSLSLCHLCLSAVY
LPPCPCVGLPSSRSHSHSLRRVNRSKTAEVCTDENVRELCGYEEVDENLL
PENIPDLNVCVCQVASGAWDLCVDFTSSCENIISDRRFLFMSLISLWVGL
GLAFIVAVVSMRVVATTYDAAAIAKAEEKKLMKAKFARDSATAAPPFGGP
V*
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