prot_Ecto-sp13_S_contig5612.15947.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5612.15947.1
Unique Nameprot_Ecto-sp13_S_contig5612.15947.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length125
Homology
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BLAST of mRNA_Ecto-sp13_S_contig5612.15947.1 vs. uniprot
Match: A0A6H5JGI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGI3_9PHAE)

HSP 1 Score: 133 bits (335), Expect = 1.010e-33
Identity = 82/118 (69.49%), Postives = 84/118 (71.19%), Query Frame = 0 
Query:    8 QAPLAASGNHSKDGKKAGAGSGGEVAGDHAAAKMAGLRPAGGGGAANGFWRLGGRAAKTAREEGGRGGGDPESDQGLVVSRGVSVTADVHVPFATVAVTRGGKLCGRIVAKEFLLEDG 125
            Q  LAA GNHSK+G KAGAGSGGEVAGDHAAAKMAGLR AG                             PES+QGLVVSRGVSVTADVHVPFATVAVTRGGKLCGRIVAKEFLLEDG
Sbjct: 1924 QPALAAPGNHSKEGNKAGAGSGGEVAGDHAAAKMAGLRRAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPESEQGLVVSRGVSVTADVHVPFATVAVTRGGKLCGRIVAKEFLLEDG 2041
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BLAST of mRNA_Ecto-sp13_S_contig5612.15947.1 vs. uniprot
Match: D8LJC8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJC8_ECTSI)

HSP 1 Score: 99.8 bits (247), Expect = 7.270e-22
Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 0 
Query:   77 DPESDQGLVVSRGVSVTADVHVPFATVAVTRGGKLCGRIVAKEFLLEDG 125
            DPESDQGLVVSRGVSVTADVHVPFATVAVTRGGKLCGRIVAKEFLLEDG
Sbjct: 1456 DPESDQGLVVSRGVSVTADVHVPFATVAVTRGGKLCGRIVAKEFLLEDG 1504
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5612.15947.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JGI3_9PHAE1.010e-3369.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJC8_ECTSI7.270e-22100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5612contigEcto-sp13_S_contig5612:6961..8275 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5612.15947.1mRNA_Ecto-sp13_S_contig5612.15947.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5612 6961..8275 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5612.15947.1 ID=prot_Ecto-sp13_S_contig5612.15947.1|Name=mRNA_Ecto-sp13_S_contig5612.15947.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=125bp
MLPPQAPQAPLAASGNHSKDGKKAGAGSGGEVAGDHAAAKMAGLRPAGGG
GAANGFWRLGGRAAKTAREEGGRGGGDPESDQGLVVSRGVSVTADVHVPF
ATVAVTRGGKLCGRIVAKEFLLEDG
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