prot_Ecto-sp13_S_contig5612.15946.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5612.15946.1
Unique Nameprot_Ecto-sp13_S_contig5612.15946.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length1220
Homology
BLAST of mRNA_Ecto-sp13_S_contig5612.15946.1 vs. uniprot
Match: A0A6H5JGI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGI3_9PHAE)

HSP 1 Score: 677 bits (1748), Expect = 4.640e-210
Identity = 629/1024 (61.43%), Postives = 649/1024 (63.38%), Query Frame = 0
Query:  150 DLTVVPSGLMRLPPPLSLEKAKELQRRSSSXXXADGSSGLLGFADEGXXXXXXXXSGVVPAVESSRMPTAIDGPTAAAAMAAGWKCSGKHGAAFAVVVAXXXXXXXXXXXXXXXXXXXXXXXRRPHSIDWTGAPQVVPATTALPDVDVTPLCTPLNAVRCGAGATAVEMPWPPTAAAGRLSRENHRQVG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PSPARLERLQIARQPLERRPSPEQGDSQKEGGSAESSDXXXXXXXXPEEGSLEEADCRDYLRGGCFPPKRGGAAVNTVAEGTERANATEGTEEEKAAAVAGVSXXXXXXXXXXXXXXQLEHAGHGQRQEWQRRPPP--VGVGGEELELLDAREVLGAEGFDVENSPVSLAGRLAVQQLSARSLARRKNSLSGPGGLAGWAXXXXXXXXTPGNAFRLHSAGVSSRRRGSGDGRVDDEDGFSTAREATNGGGQS-KFFCLDRGSSWRSVAESIGSCGGGGRGIAAAVVAAYDGSVADSDADSSTAGVATGGGRTQRARFY------TAEDDAEKKLIAEQIEALRSGGDDTAAQLLPVRAAXXXXXXXXXXXVATAARGLTSVADSKIASFVTTLSGGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGENDGEXXXXXXXXXAKAXXXXXXXXXGGGLASDFFAEAVLEEFTVDHGEGAAEAAATPATPAXXXXXXXXXXXAAPDPLPRRKDKRRSSWEAFTFSKGVFQLASPGNAAAAGGVNLGSGALTGTGVPVXPPPGICLVDQAKELQARRKYEVSLSEKALAKEKTRSGSGEQHGRAVPEAAS 987
            DLTVVPSGLMRLPPPLSLEKAKELQRRSSS   ADGSSGLLGFADEG        S VVPAVESSRMPTAIDGPTAAAAMAAGWKCSGK GAAFAVV  XXXXXXXXXXXXXXXXX      RRPHSIDWTGAPQVVPATTALPDVDVTPLCTPLNAVRCGAGATA EMPWP  AA  RL RE+HRQVG                                                                                                                                                                                  +P RL  LQ ARQPLERRP+PEQ +S+KEGGSAE   XXXXXXX PEEGS +EA+ RDY RG CFPP+RG   VNTV  GTERANAT+GTEE++AAA     XXXXXXXXXXXXXX                     VGVGGEELELLDAREVLGAEGFDVENSPVSLAGRLAVQQLSARSLARRK+SLSG GGLAGWA XXXXXXXTPGNAFRL+SAGVSSRRR SGDGRVDDEDGFSTAREATNGGG+S KFFCLDRGSSWRS+AES+GSCG                                                 TAED AEKKLIAEQIEALR  GDDTAAQLLPVRAA    XXXXXXX     RG TS   SK ASFVTTL    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     XXXXXXXXXXX                E+ GE XXXXXXXX   XXXXXXX  G GLASDFFAEAVLEEFTVD GEGAAEA        XXXXXXXXXXX     LPRRKDKRRSSWEAFTFSKGVFQLASPG+      VNLG GALTG+GVPV PPPGICLVDQAKELQARRKYEVSLSEKALAKEK+RS SGEQHGRAVPEAAS
Sbjct:  447 DLTVVPSGLMRLPPPLSLEKAKELQRRSSSSALADGSSGLLGFADEGRSVNNGNNSSVVPAVESSRMPTAIDGPTAAAAMAAGWKCSGKQGAAFAVVXXXXXXXXXXXXXXXXXXX------RRPHSIDWTGAPQVVPATTALPDVDVTPLCTPLNAVRCGAGATAAEMPWPSAAATRRLPREDHRQVGRRGQVGTVVAEXXXXXXXXXXXXXSGSGEDREVSTSXXXXXAEDGRAPGEEGRDVLEAPPYSQRQQQEVGVKDAVFSAAAEVSASLSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADVIIKLPDEPIAAGAAPVRLRSLQNARQPLERRPAPEQENSKKEGGSAEXXXXXXXXXXAPEEGSHDEANSRDYRRGRCFPPERG-VVVNTVTAGTERANATDGTEEKEAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGVGGEELELLDAREVLGAEGFDVENSPVSLAGRLAVQQLSARSLARRKDSLSGTGGLAGWAAXXXXXXXTPGNAFRLNSAGVSSRRRISGDGRVDDEDGFSTAREATNGGGRSSKFFCLDRGSSWRSIAESVGSCGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAEDGAEKKLIAEQIEALRRVGDDTAAQLLPVRAAAPSPXXXXXXXXXX--RGPTSATGSKNASFVTTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDRGSXXXXXXXXXXXDFCGSGDEEE------EDAGEDXXXXXXXXXXXXXXXXXXPSGVGLASDFFAEAVLEEFTVDDGEGAAEAXXXXXXXXXXXXXXXXXXXXXXXXLPRRKDKRRSSWEAFTFSKGVFQLASPGS------VNLGGGALTGSGVPVPPPPGICLVDQAKELQARRKYEVSLSEKALAKEKSRSDSGEQHGRAVPEAAS 1449          
BLAST of mRNA_Ecto-sp13_S_contig5612.15946.1 vs. uniprot
Match: D8LJC8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJC8_ECTSI)

HSP 1 Score: 646 bits (1667), Expect = 3.140e-202
Identity = 843/1136 (74.21%), Postives = 865/1136 (76.14%), Query Frame = 0
Query:    5 RFPGLGDRPGGGGRPGPGDPACVFLFGRRGGLGQQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLTVVPSGLMRLPPPLSLEKAKELQRRSSSXXXADGSSGLLGFADEGXXXXXXXXSGVVPAVESSRMPTAIDGPTAAAAMAAGWKCSGKHGAAFAVVVAXXXXXXXXXXXXXXXXXXXXXXX--------RRPHSIDWTGAPQVVPATTALPDVDVTPLCTPLNAVRCGAGATAVEMPWPPTAAAGRLSRENHRQ---VGPSPARLERLQIARQPLERRPSPEQGDSQKEGGSAESSDXXXXXXXXPEEGSLEEADCRDYLRGGCFPPKRGG-AAVNTVAEGTERANATEGTEEEKAAAVAGVSXXXXXXXXXXXXXXQLEHAGHGQRQEWQRRPPP------VGVGGEELELLDAREVLGAEGFDVENSPVSLAGRLAVQQLSARSLARRKNSLSGPGGLAGWAXXXXXXXX-TPGNA-FRLHSAGVSSRRRGSGDGRVDDEDGFSTAREATNGGGQS-KFFCLDRGSSWRSVAESIGSCGGGGRGIAAAVVAAYDGSVADSDADSSTAGVATGGGRTQRARFYTAEDDAEKKLIAEQIEALRSGGDDTAAQLLPVRAAXXXXXXXXXXXVATAARGLTSVADSKIASFVTTLSGGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGENDGEXXXXXXXXXAKAXXXXXXXXXGGGLASDFFAEAVLEEFTVDHGEGAAEAAATPATPAXXXXXXXXXXXAA-PDPLPRRKDKRRSSWEAFTFSKGVFQLASPGNAAAAGGVNLGSGALTGTGVPVXPPPGICLVDQAKELQARRKYEVSLSEKALAKEKTRSGSGEQHGRAVPEAASSSMEHKNSGQA----------REEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTIARPRGTVDDPSKVTTAASPQALAPAPFAPLGKKQKA 1108
            RFPG GDRP GGG PGP DPA VFLFGRRGGLGQ  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LTVVPSGLMRLPPPLSLEKAKELQRRSSS   ADG SGLLGFADEG  XXXXXXS V+PAVESS MPTAIDGPTAAAAMAAGWKCSGKHGAAFAVVVAXXXXXXXXXXXXXXXXXXXXXXX        RRPHSIDWT APQVVPATTALPDVDVTPLCTPLNAVRCGAGA AVEMPWPP AA GRL RENHRQ    G +P RL+RLQ  RQPLERRP+PEQ DS+K         XXXXXXXX EEGS E     DY RGGCFPP+RGG AAV+T A+GT RANATE TEE          XXXXXXXXXXXXXX                         VGVGGEELELLDAREVLGAEGFDVENSPVSLAGRLAVQQLSARSLARRKNSLSG G LAGWA  XXXXXX TP  A FRL+SAGVSSRRR SGDGRVDDEDGFSTARE TNGGG+S KFFCL+RGSSWRSVAES+GSC G                                                                             XXXXXXXXXXX                           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       XXXXXXXXX   XXXXXXXXXG GLASDFFAEAVLEEFTVD GEGA           XXXXXX     A  P+PLP RK+KRRSS EAFTFSKGVFQLASP NA+ AG VNLGSGALTGTGV V PPPGICLVDQAKELQARRKYEVSLSEKALAKEK+RSGSGEQHGR VPE +SSSME K++GQA              XXXXXXXXXXXXXXXXXXXXXXXX   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTIARPRGTVDDPS+  +  SPQ+LAPAPFAPLGKKQKA
Sbjct:  128 RFPGFGDRPSGGGWPGPSDPAAVFLFGRRGGLGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-LTVVPSGLMRLPPPLSLEKAKELQRRSSSSALADGGSGLLGFADEGGSXXXXXXSSVLPAVESSGMPTAIDGPTAAAAMAAGWKCSGKHGAAFAVVVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRPHSIDWTEAPQVVPATTALPDVDVTPLCTPLNAVRCGAGAAAVEMPWPPAAAVGRLPRENHRQPAAAGAAPVRLQRLQNVRQPLERRPAPEQEDSEKXXXXXXXXXXXXXXXXXXEEGSHE-----DYRRGGCFPPERGGEAAVSTGAKGTVRANATEDTEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGVGGEELELLDAREVLGAEGFDVENSPVSLAGRLAVQQLSARSLARRKNSLSGSGSLAGWASGXXXXXXXTPRKAAFRLNSAGVSSRRRVSGDGRVDDEDGFSTAREGTNGGGRSSKFFCLERGSSWRSVAESVGSCAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGLASDFFAEAVLEEFTVDDGEGAXXXXXXXXXXXXXXXXXSAKTRAVTPEPLPWRKNKRRSSLEAFTFSKGVFQLASPANASTAGSVNLGSGALTGTGVAVPPPPGICLVDQAKELQARRKYEVSLSEKALAKEKSRSGSGEQHGRVVPEVSSSSMEQKSTGQAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTIARPRGTVDDPSQAQSPQSPQSLAPAPFAPLGKKQKA 1254          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5612.15946.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JGI3_9PHAE4.640e-21061.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJC8_ECTSI3.140e-20274.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 992..1022
NoneNo IPR availableCOILSCoilCoilcoord: 440..460

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5612contigEcto-sp13_S_contig5612:177..6756 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5612.15946.1mRNA_Ecto-sp13_S_contig5612.15946.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5612 177..6758 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5612.15946.1 ID=prot_Ecto-sp13_S_contig5612.15946.1|Name=mRNA_Ecto-sp13_S_contig5612.15946.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1220bp
RRRCRFPGLGDRPGGGGRPGPGDPACVFLFGRRGGLGQQHQQQRNHTTAA
PFVPPPPPPAAAVAAAGFSGGSTPAAAGGDGKRSPTGGGAAWIGPMLRRH
LRRGNRSGGSGGGVVVRAAAERAADAADAVVEPAAAAAAAAAAASSVEED
LTVVPSGLMRLPPPLSLEKAKELQRRSSSSASADGSSGLLGFADEGGSGN
NGNNSGVVPAVESSRMPTAIDGPTAAAAMAAGWKCSGKHGAAFAVVVAPG
EEEDEDHHQRDHRPQQQQQHHRRPHSIDWTGAPQVVPATTALPDVDVTPL
CTPLNAVRCGAGATAVEMPWPPTAAAGRLSRENHRQVGPSPARLERLQIA
RQPLERRPSPEQGDSQKEGGSAESSDSPSPPPPAPEEGSLEEADCRDYLR
GGCFPPKRGGAAVNTVAEGTERANATEGTEEEKAAAVAGVSSTLEAREEE
EEEEDQLEHAGHGQRQEWQRRPPPVGVGGEELELLDAREVLGAEGFDVEN
SPVSLAGRLAVQQLSARSLARRKNSLSGPGGLAGWAGGGGGGGGTPGNAF
RLHSAGVSSRRRGSGDGRVDDEDGFSTAREATNGGGQSKFFCLDRGSSWR
SVAESIGSCGGGGRGIAAAVVAAYDGSVADSDADSSTAGVATGGGRTQRA
RFYTAEDDAEKKLIAEQIEALRSGGDDTAAQLLPVRAAAASPSPASSSSV
ATAARGLTSVADSKIASFVTTLSGGTGAAARSSSTSAAAASSNGGDGHGR
GDARGGGVSRRRGGGGGGVGGSSGGGDDRGGGGSGDGRGGGGDDFCGSRD
EEEEDVGENDGEEEEDEEEEKAKAAPAAPSAPSGGGLASDFFAEAVLEEF
TVDHGEGAAEAAATPATPAAAGGGSAKAKAAAPDPLPRRKDKRRSSWEAF
TFSKGVFQLASPGNAAAAGGVNLGSGALTGTGVPVPPPPGICLVDQAKEL
QARRKYEVSLSEKALAKEKTRSGSGEQHGRAVPEAASSSMEHKNSGQARE
EVQEEEEEEEEEERNNAGGQEEPDSSSERSSDKISNGGVPSRAAGTTAAT
VAAALRRRRLAAAAAASSSTTIARPRGTVDDPSKVTTAASPQALAPAPFA
PLGKKQKATAASDASRTGAAVVAAGGGRGKLLRPPPVHCGGEEEGANAAS
DGRQQAGPSSSSSSSSSSSLKQQQQQQQQQVLPPRLLGPAARRRSVVSVS
PNTSSGGSEVGDDSFHSAAS
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